RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ANP32AP39687 249 aaKnown RBP22.94■■□□□ 1.26
PHGDH-226ENST00000641756 USP31Q70CQ4 1352 aa22.94■■□□□ 1.26
PHGDH-226ENST00000641756 ANKLE2Q86XL3 938 aa22.94■■□□□ 1.26
PHGDH-226ENST00000641756 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
PHGDH-226ENST00000641756 PIK3R4Q99570 1358 aa22.93■■□□□ 1.26
PHGDH-226ENST00000641756 TTC21AQ8NDW8 1320 aa22.93■■□□□ 1.26
PHGDH-226ENST00000641756 RGS3P49796 1198 aa22.93■■□□□ 1.26
PHGDH-226ENST00000641756 HSP90AB2PQ58FF8 381 aa22.93■■□□□ 1.26
PHGDH-226ENST00000641756 DLG5Q8TDM6 1919 aa22.93■■□□□ 1.26
PHGDH-226ENST00000641756 NPM2Q86SE8 214 aaKnown RBP22.93■■□□□ 1.26
PHGDH-226ENST00000641756 FTSJ3Q8IY81 847 aaKnown RBP22.93■■□□□ 1.26
PHGDH-226ENST00000641756 DZIP1LQ8IYY4 767 aaKnown RBP22.92■■□□□ 1.26
PHGDH-226ENST00000641756 MVPQ14764 893 aaKnown RBP22.91■■□□□ 1.26
PHGDH-226ENST00000641756 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
PHGDH-226ENST00000641756 ADAMTSL3P82987 1691 aa22.91■■□□□ 1.26
PHGDH-226ENST00000641756 ERICH6Q7L0X2 663 aa22.91■■□□□ 1.26
PHGDH-226ENST00000641756 NOB1Q9ULX3 412 aaKnown RBP22.91■■□□□ 1.26
PHGDH-226ENST00000641756 PCDHB15Q9Y5E8 787 aa22.91■■□□□ 1.26
PHGDH-226ENST00000641756 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
PHGDH-226ENST00000641756 TRIM27P14373 513 aa22.9■■□□□ 1.26
PHGDH-226ENST00000641756 RBM33Q96EV2 1170 aaKnown RBP22.9■■□□□ 1.26
PHGDH-226ENST00000641756 FAM83GA6ND36 823 aa22.9■■□□□ 1.26
PHGDH-226ENST00000641756 FMN2Q9NZ56 1722 aa22.89■■□□□ 1.26
PHGDH-226ENST00000641756 ANKARQ7Z5J8 1434 aa22.89■■□□□ 1.26
PHGDH-226ENST00000641756 CALD1Q05682 793 aaKnown RBP22.89■■□□□ 1.25
PHGDH-226ENST00000641756 MAP3K19Q56UN5 1328 aa22.89■■□□□ 1.25
PHGDH-226ENST00000641756 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
PHGDH-226ENST00000641756 IFT57Q9NWB7 429 aa22.88■■□□□ 1.25
PHGDH-226ENST00000641756 PIK3C2AO00443 1686 aa22.88■■□□□ 1.25
PHGDH-226ENST00000641756 CHD2O14647 1828 aaKnown RBP22.87■■□□□ 1.25
PHGDH-226ENST00000641756 GNAI1P63096 354 aa22.87■■□□□ 1.25
PHGDH-226ENST00000641756 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
PHGDH-226ENST00000641756 AAMPQ13685 434 aa22.87■■□□□ 1.25
PHGDH-226ENST00000641756 ATF7IPQ6VMQ6 1270 aa22.87■■□□□ 1.25
PHGDH-226ENST00000641756 MBIPQ9NS73 344 aa22.87■■□□□ 1.25
PHGDH-226ENST00000641756 NUTM2GQ5VZR2 741 aa22.86■■□□□ 1.25
PHGDH-226ENST00000641756 IPO9Q96P70 1041 aaKnown RBP22.86■■□□□ 1.25
PHGDH-226ENST00000641756 ZNF853P0CG23 659 aa22.85■■□□□ 1.25
PHGDH-226ENST00000641756 ALDH1L2Q3SY69 923 aa22.85■■□□□ 1.25
PHGDH-226ENST00000641756 TSPYL6Q8N831 410 aa22.85■■□□□ 1.25
PHGDH-226ENST00000641756 NLRP6P59044 892 aa22.84■■□□□ 1.25
PHGDH-226ENST00000641756 ITPRIPQ8IWB1 547 aa22.84■■□□□ 1.25
PHGDH-226ENST00000641756 ELL2O00472 640 aaPredicted RBP22.84■■□□□ 1.25
PHGDH-226ENST00000641756 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.25
PHGDH-226ENST00000641756 KIF16BQ96L93 1317 aa22.83■■□□□ 1.25
PHGDH-226ENST00000641756 VAMP4O75379 141 aa22.82■■□□□ 1.24
PHGDH-226ENST00000641756 CFAP44Q96MT7 982 aa22.82■■□□□ 1.24
PHGDH-226ENST00000641756 NOP58Q9Y2X3 529 aaKnown RBP22.82■■□□□ 1.24
PHGDH-226ENST00000641756 SBNO1A3KN83 1393 aa22.82■■□□□ 1.24
PHGDH-226ENST00000641756 AMPHP49418 695 aa22.82■■□□□ 1.24
PHGDH-226ENST00000641756 FLT4P35916 1363 aa22.82■■□□□ 1.24
PHGDH-226ENST00000641756 PAK3O75914 559 aaPredicted RBP22.81■■□□□ 1.24
PHGDH-226ENST00000641756 FAM161AQ3B820 660 aa22.81■■□□□ 1.24
PHGDH-226ENST00000641756 TMEM57Q8N5G2 664 aa22.81■■□□□ 1.24
PHGDH-226ENST00000641756 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
PHGDH-226ENST00000641756 IPO8O15397 1037 aaKnown RBP22.81■■□□□ 1.24
PHGDH-226ENST00000641756 C8orf34Q49A92 452 aa22.81■■□□□ 1.24
PHGDH-226ENST00000641756 DDX19BQ9UMR2 479 aa22.79■■□□□ 1.24
PHGDH-226ENST00000641756 ZNF428Q96B54 188 aa22.79■■□□□ 1.24
PHGDH-226ENST00000641756 RWDD1Q9H446 243 aaPredicted RBP22.79■■□□□ 1.24
PHGDH-226ENST00000641756 ABTB2Q8N961 1025 aa22.78■■□□□ 1.24
PHGDH-226ENST00000641756 C8orf58Q8NAV2 365 aa22.78■■□□□ 1.24
PHGDH-226ENST00000641756 PHF8Q9UPP1 1060 aa22.78■■□□□ 1.24
PHGDH-226ENST00000641756 ARHGEF10O15013 1369 aa22.78■■□□□ 1.24
PHGDH-226ENST00000641756 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
PHGDH-226ENST00000641756 TWISTNBQ3B726 338 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-226ENST00000641756 MCM10Q7L590 875 aa22.78■■□□□ 1.24
PHGDH-226ENST00000641756 C14orf37Q86TY3 774 aa22.78■■□□□ 1.24
PHGDH-226ENST00000641756 MRPL50Q8N5N7 158 aaKnown RBP22.78■■□□□ 1.24
PHGDH-226ENST00000641756 NPHP4O75161 1426 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-226ENST00000641756 BRPF1P55201 1214 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-226ENST00000641756 EYA1Q99502 592 aa22.75■■□□□ 1.23
PHGDH-226ENST00000641756 ZBTB47Q9UFB7 747 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-226ENST00000641756 PDZRN3Q9UPQ7 1066 aa22.75■■□□□ 1.23
PHGDH-226ENST00000641756 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
PHGDH-226ENST00000641756 FOXO3O43524 673 aa22.73■■□□□ 1.23
PHGDH-226ENST00000641756 HOXC9P31274 260 aa22.72■■□□□ 1.23
PHGDH-226ENST00000641756 MTHFSDQ2M296 383 aaKnown RBP22.72■■□□□ 1.23
PHGDH-226ENST00000641756 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
PHGDH-226ENST00000641756 IGSF1Q8N6C5 1336 aa22.71■■□□□ 1.23
PHGDH-226ENST00000641756 ZBTB40Q9NUA8 1239 aa22.71■■□□□ 1.23
PHGDH-226ENST00000641756 KRT24Q2M2I5 525 aa22.7■■□□□ 1.23
PHGDH-226ENST00000641756 USP54Q70EL1 1684 aa22.7■■□□□ 1.22
PHGDH-226ENST00000641756 KDRP35968 1356 aa22.7■■□□□ 1.22
PHGDH-226ENST00000641756 MYT1Q01538 1121 aa22.7■■□□□ 1.22
PHGDH-226ENST00000641756 LTV1Q96GA3 475 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-226ENST00000641756 CHL1O00533 1208 aa22.69■■□□□ 1.22
PHGDH-226ENST00000641756 ARHGAP45Q92619 1136 aa22.68■■□□□ 1.22
PHGDH-226ENST00000641756 PSME1Q06323 249 aa22.67■■□□□ 1.22
PHGDH-226ENST00000641756 HDAC1Q13547 482 aaPredicted RBP22.67■■□□□ 1.22
PHGDH-226ENST00000641756 CRB1P82279 1406 aa22.67■■□□□ 1.22
PHGDH-226ENST00000641756 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
PHGDH-226ENST00000641756 MIS18AQ9NYP9 233 aa22.66■■□□□ 1.22
PHGDH-226ENST00000641756 KIF24Q5T7B8 1368 aa22.66■■□□□ 1.22
PHGDH-226ENST00000641756 DNAJC5Q9H3Z4 198 aa22.65■■□□□ 1.22
PHGDH-226ENST00000641756 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.22
PHGDH-226ENST00000641756 ORAI2Q96SN7 254 aa22.64■■□□□ 1.22
PHGDH-226ENST00000641756 NWD1Q149M9 1564 aa22.63■■□□□ 1.21
PHGDH-226ENST00000641756 ABCC4O15439 1325 aa22.63■■□□□ 1.21
PHGDH-226ENST00000641756 GAS2L2Q8NHY3 880 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms