RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ALS2Q96Q42 1657 aa11.61□□□□□ -0.55
PHGDH-219ENST00000641513 RGPD5Q99666 1765 aa11.6□□□□□ -0.55
PHGDH-219ENST00000641513 HMOX1P09601 288 aa11.6□□□□□ -0.55
PHGDH-219ENST00000641513 IL13P35225 146 aa11.6□□□□□ -0.55
PHGDH-219ENST00000641513 IRX6P78412 446 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-219ENST00000641513 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
PHGDH-219ENST00000641513 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
PHGDH-219ENST00000641513 PRKAR2BP31323 418 aa11.59□□□□□ -0.55
PHGDH-219ENST00000641513 RGPD1P0DJD0 1748 aa11.58□□□□□ -0.56
PHGDH-219ENST00000641513 SBNO1A3KN83 1393 aa11.58□□□□□ -0.56
PHGDH-219ENST00000641513 FLT4P35916 1363 aa11.58□□□□□ -0.56
PHGDH-219ENST00000641513 FCHSD2O94868 740 aa11.58□□□□□ -0.56
PHGDH-219ENST00000641513 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
PHGDH-219ENST00000641513 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
PHGDH-219ENST00000641513 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
PHGDH-219ENST00000641513 DDX17Q92841 729 aaKnown RBP11.57□□□□□ -0.56
PHGDH-219ENST00000641513 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
PHGDH-219ENST00000641513 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
PHGDH-219ENST00000641513 ZNF521Q96K83 1311 aa11.57□□□□□ -0.56
PHGDH-219ENST00000641513 NFAT5O94916 1531 aa11.56□□□□□ -0.56
PHGDH-219ENST00000641513 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
PHGDH-219ENST00000641513 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
PHGDH-219ENST00000641513 KCNH5Q8NCM2 988 aa11.56□□□□□ -0.56
PHGDH-219ENST00000641513 LTV1Q96GA3 475 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-219ENST00000641513 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
PHGDH-219ENST00000641513 PHRF1Q9P1Y6 1649 aaKnown RBP11.56□□□□□ -0.56
PHGDH-219ENST00000641513 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
PHGDH-219ENST00000641513 E9PSI1 815 aa11.55□□□□□ -0.56
PHGDH-219ENST00000641513 RIPK4P57078 832 aa11.55□□□□□ -0.56
PHGDH-219ENST00000641513 SULT6B1Q6IMI4 303 aa11.55□□□□□ -0.56
PHGDH-219ENST00000641513 SLIT3O75094 1523 aa11.55□□□□□ -0.56
PHGDH-219ENST00000641513 HOXC9P31274 260 aa11.54□□□□□ -0.56
PHGDH-219ENST00000641513 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
PHGDH-219ENST00000641513 SLAIN2Q9P270 581 aa11.54□□□□□ -0.56
PHGDH-219ENST00000641513 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
PHGDH-219ENST00000641513 DUSP27Q5VZP5 1158 aa11.53□□□□□ -0.56
PHGDH-219ENST00000641513 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
PHGDH-219ENST00000641513 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
PHGDH-219ENST00000641513 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
PHGDH-219ENST00000641513 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
PHGDH-219ENST00000641513 NHSL1Q5SYE7 1610 aa11.53□□□□□ -0.56
PHGDH-219ENST00000641513 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.56
PHGDH-219ENST00000641513 PXDNQ92626 1479 aa11.52□□□□□ -0.56
PHGDH-219ENST00000641513 GCP02774 474 aa11.52□□□□□ -0.57
PHGDH-219ENST00000641513 NFE2L2Q16236 605 aa11.52□□□□□ -0.57
PHGDH-219ENST00000641513 BRINP3Q76B58 766 aa11.52□□□□□ -0.57
PHGDH-219ENST00000641513 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
PHGDH-219ENST00000641513 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-219ENST00000641513 ARHGEF10O15013 1369 aa11.52□□□□□ -0.57
PHGDH-219ENST00000641513 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.57
PHGDH-219ENST00000641513 MED1Q15648 1581 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-219ENST00000641513 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
PHGDH-219ENST00000641513 IP6K1Q92551 441 aa11.51□□□□□ -0.57
PHGDH-219ENST00000641513 RRP1P56182 461 aaKnown RBP11.5□□□□□ -0.57
PHGDH-219ENST00000641513 TRMT2AQ8IZ69 625 aaKnown RBP11.5□□□□□ -0.57
PHGDH-219ENST00000641513 EYA1Q99502 592 aa11.5□□□□□ -0.57
PHGDH-219ENST00000641513 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
PHGDH-219ENST00000641513 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
PHGDH-219ENST00000641513 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
PHGDH-219ENST00000641513 USP19O94966 1318 aa11.5□□□□□ -0.57
PHGDH-219ENST00000641513 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
PHGDH-219ENST00000641513 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
PHGDH-219ENST00000641513 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
PHGDH-219ENST00000641513 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
PHGDH-219ENST00000641513 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
PHGDH-219ENST00000641513 SPATA31A3Q5VYP0 1347 aa11.49□□□□□ -0.57
PHGDH-219ENST00000641513 HAP1P54257 671 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-219ENST00000641513 ARHGEF25Q86VW2 580 aa11.48□□□□□ -0.57
PHGDH-219ENST00000641513 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
PHGDH-219ENST00000641513 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
PHGDH-219ENST00000641513 IGSF1Q8N6C5 1336 aa11.48□□□□□ -0.57
PHGDH-219ENST00000641513 COL18A1P39060 1754 aa11.47□□□□□ -0.57
PHGDH-219ENST00000641513 FAM208AQ9UK61 1670 aaKnown RBP11.47□□□□□ -0.57
PHGDH-219ENST00000641513 LTBP4Q8N2S1 1624 aa11.47□□□□□ -0.57
PHGDH-219ENST00000641513 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
PHGDH-219ENST00000641513 USHBP1Q8N6Y0 703 aa11.47□□□□□ -0.57
PHGDH-219ENST00000641513 TSR2Q969E8 191 aaKnown RBP11.47□□□□□ -0.57
PHGDH-219ENST00000641513 IL16Q14005 1332 aa11.46□□□□□ -0.57
PHGDH-219ENST00000641513 PLIN1O60240 522 aa11.46□□□□□ -0.57
PHGDH-219ENST00000641513 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-219ENST00000641513 THUMPD2Q9BTF0 503 aaKnown RBP11.46□□□□□ -0.57
PHGDH-219ENST00000641513 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
PHGDH-219ENST00000641513 ANKRD24Q8TF21 1146 aa11.45□□□□□ -0.58
PHGDH-219ENST00000641513 PHLPP1O60346 1717 aa11.45□□□□□ -0.58
PHGDH-219ENST00000641513 KDRP35968 1356 aa11.44□□□□□ -0.58
PHGDH-219ENST00000641513 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-219ENST00000641513 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
PHGDH-219ENST00000641513 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
PHGDH-219ENST00000641513 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
PHGDH-219ENST00000641513 GAS2L2Q8NHY3 880 aa11.44□□□□□ -0.58
PHGDH-219ENST00000641513 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
PHGDH-219ENST00000641513 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
PHGDH-219ENST00000641513 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
PHGDH-219ENST00000641513 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
PHGDH-219ENST00000641513 GNAI1P63096 354 aa11.43□□□□□ -0.58
PHGDH-219ENST00000641513 CHRNA2Q15822 529 aa11.43□□□□□ -0.58
PHGDH-219ENST00000641513 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
PHGDH-219ENST00000641513 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
PHGDH-219ENST00000641513 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
PHGDH-219ENST00000641513 BCAR3O75815 825 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms