RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 HSP90AB2PQ58FF8 381 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 ERCC4Q92889 916 aaPredicted RBP14.57□□□□□ -0.08
RBM39-245ENST00000639702 NEK4P51957 841 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
RBM39-245ENST00000639702 DACH1Q9UI36 760 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 CCDC141Q6ZP82 1450 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 CCDC69A6NI79 296 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 NBPF1Q3BBV0 1214 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 MPHOSPH8Q99549 860 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 SLC12A5Q9H2X9 1139 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 KRT18P05783 430 aaKnown RBP14.56□□□□□ -0.08
RBM39-245ENST00000639702 STK38Q15208 465 aa14.56□□□□□ -0.08
RBM39-245ENST00000639702 FCHSD2O94868 740 aa14.55□□□□□ -0.08
RBM39-245ENST00000639702 DDX54Q8TDD1 881 aaKnown RBP14.55□□□□□ -0.08
RBM39-245ENST00000639702 POLA1P09884 1462 aaPredicted RBP14.55□□□□□ -0.08
RBM39-245ENST00000639702 ZNF771Q7L3S4 317 aaPredicted RBP14.55□□□□□ -0.08
RBM39-245ENST00000639702 CAGE1Q8TC20 777 aa14.55□□□□□ -0.08
RBM39-245ENST00000639702 TSPY26PQ9H489 355 aa14.55□□□□□ -0.08
RBM39-245ENST00000639702 SYCP1Q15431 976 aa14.55□□□□□ -0.08
RBM39-245ENST00000639702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.55□□□□□ -0.08
RBM39-245ENST00000639702 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 CDKL5O76039 1030 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 CTNNA3Q9UI47 895 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 HSP90B2PQ58FF3 399 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 EPRSP07814 1512 aaKnown RBP14.54□□□□□ -0.08
RBM39-245ENST00000639702 PRXQ9BXM0 1461 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 ZFYVE27Q5T4F4 411 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 NASPP49321 788 aaPredicted RBP14.54□□□□□ -0.08
RBM39-245ENST00000639702 TXLNBQ8N3L3 684 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 PRDM11Q9NQV5 511 aa14.54□□□□□ -0.08
RBM39-245ENST00000639702 NOL7Q9UMY1 257 aaKnown RBP14.54□□□□□ -0.08
RBM39-245ENST00000639702 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
RBM39-245ENST00000639702 PDIA4P13667 645 aaKnown RBP14.53□□□□□ -0.08
RBM39-245ENST00000639702 STIM1Q13586 685 aa14.53□□□□□ -0.08
RBM39-245ENST00000639702 ATF7IPQ6VMQ6 1270 aa14.53□□□□□ -0.08
RBM39-245ENST00000639702 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
RBM39-245ENST00000639702 NESP48681 1621 aa14.53□□□□□ -0.08
RBM39-245ENST00000639702 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
RBM39-245ENST00000639702 MVPQ14764 893 aaKnown RBP14.52□□□□□ -0.08
RBM39-245ENST00000639702 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.08
RBM39-245ENST00000639702 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.08
RBM39-245ENST00000639702 NUTM2BA6NNL0 878 aaPredicted RBP14.52□□□□□ -0.08
RBM39-245ENST00000639702 NUTM2EB1AL46 878 aaPredicted RBP14.52□□□□□ -0.08
RBM39-245ENST00000639702 NUTM2AQ8IVF1 878 aaPredicted RBP14.52□□□□□ -0.08
RBM39-245ENST00000639702 SMC2O95347 1197 aa14.52□□□□□ -0.09
RBM39-245ENST00000639702 TRIM5Q9C035 493 aa14.52□□□□□ -0.09
RBM39-245ENST00000639702 ZSCAN31Q96LW9 406 aaPredicted RBP14.52□□□□□ -0.09
RBM39-245ENST00000639702 KRT32Q14532 448 aa14.51□□□□□ -0.09
RBM39-245ENST00000639702 LUC7LQ9NQ29 371 aaKnown RBP14.51□□□□□ -0.09
RBM39-245ENST00000639702 GNAT3A8MTJ3 354 aa14.51□□□□□ -0.09
RBM39-245ENST00000639702 WDR33Q9C0J8 1336 aaKnown RBP14.51□□□□□ -0.09
RBM39-245ENST00000639702 MYL6BP14649 208 aa14.51□□□□□ -0.09
RBM39-245ENST00000639702 ZNHIT6Q9NWK9 470 aaKnown RBP14.51□□□□□ -0.09
RBM39-245ENST00000639702 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
RBM39-245ENST00000639702 STARD3NLO95772 234 aa14.51□□□□□ -0.09
RBM39-245ENST00000639702 IGHMBP2P38935 993 aaKnown RBP14.5□□□□□ -0.09
RBM39-245ENST00000639702 NFKBIBQ15653 356 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 NFE2L2Q16236 605 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 CEP126Q9P2H0 1117 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 KDM4AO75164 1064 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 WASF1Q92558 559 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 ATP2B1P20020 1258 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 AACSQ86V21 672 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 RPAP2Q8IXW5 612 aaPredicted RBP14.5□□□□□ -0.09
RBM39-245ENST00000639702 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 SIL1Q9H173 461 aa14.5□□□□□ -0.09
RBM39-245ENST00000639702 TRAK2O60296 914 aa14.49□□□□□ -0.09
RBM39-245ENST00000639702 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
RBM39-245ENST00000639702 ZNF652Q9Y2D9 606 aa14.49□□□□□ -0.09
RBM39-245ENST00000639702 CHD1LQ86WJ1 897 aa14.49□□□□□ -0.09
RBM39-245ENST00000639702 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
RBM39-245ENST00000639702 IQGAP2Q13576 1575 aa14.48□□□□□ -0.09
RBM39-245ENST00000639702 KIF14Q15058 1648 aa14.48□□□□□ -0.09
RBM39-245ENST00000639702 NSD3Q9BZ95 1437 aa14.48□□□□□ -0.09
RBM39-245ENST00000639702 CAVIN1Q6NZI2 390 aaKnown RBP14.48□□□□□ -0.09
RBM39-245ENST00000639702 NOM1Q5C9Z4 860 aaKnown RBP14.48□□□□□ -0.09
RBM39-245ENST00000639702 CUL7Q14999 1698 aa14.48□□□□□ -0.09
RBM39-245ENST00000639702 RBM5P52756 815 aaKnown RBP eCLIP14.48□□□□□ -0.09
RBM39-245ENST00000639702 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
RBM39-245ENST00000639702 PATL2C9JE40 543 aaKnown RBP14.47□□□□□ -0.09
RBM39-245ENST00000639702 K7ELQ4 463 aaPredicted RBP14.47□□□□□ -0.09
RBM39-245ENST00000639702 PRPF40AO75400 957 aaKnown RBP14.47□□□□□ -0.09
RBM39-245ENST00000639702 CCDC192P0DO97 292 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 AKAP2Q9Y2D5 859 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 SRGAP3O43295 1099 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 KRT85P78386 507 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 MTERF4Q7Z6M4 381 aaKnown RBP14.47□□□□□ -0.09
RBM39-245ENST00000639702 UBAC1Q9BSL1 405 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 BCAR3O75815 825 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 BLOC1S2Q6QNY1 142 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 ZNF287Q9HBT7 754 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 NBPF8Q3BBV2 869 aa14.47□□□□□ -0.09
RBM39-245ENST00000639702 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
RBM39-245ENST00000639702 RAB11FIP3O75154 756 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms