RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 SMC4Q9NTJ3 1288 aa11.52□□□□□ -0.57
NECAP1-217ENST00000639276 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
NECAP1-217ENST00000639276 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
NECAP1-217ENST00000639276 SSH2Q76I76 1423 aa11.52□□□□□ -0.57
NECAP1-217ENST00000639276 SULT6B1Q6IMI4 303 aa11.52□□□□□ -0.57
NECAP1-217ENST00000639276 ELL2O00472 640 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-217ENST00000639276 RGS3P49796 1198 aa11.51□□□□□ -0.57
NECAP1-217ENST00000639276 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
NECAP1-217ENST00000639276 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
NECAP1-217ENST00000639276 IL16Q14005 1332 aa11.5□□□□□ -0.57
NECAP1-217ENST00000639276 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
NECAP1-217ENST00000639276 BACH2Q9BYV9 841 aa11.5□□□□□ -0.57
NECAP1-217ENST00000639276 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
NECAP1-217ENST00000639276 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
NECAP1-217ENST00000639276 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
NECAP1-217ENST00000639276 TRIM27P14373 513 aa11.49□□□□□ -0.57
NECAP1-217ENST00000639276 PEAK1Q9H792 1746 aa11.49□□□□□ -0.57
NECAP1-217ENST00000639276 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-217ENST00000639276 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
NECAP1-217ENST00000639276 MS4A1P11836 297 aa11.48□□□□□ -0.57
NECAP1-217ENST00000639276 NLRP6P59044 892 aa11.48□□□□□ -0.57
NECAP1-217ENST00000639276 MBIPQ9NS73 344 aa11.48□□□□□ -0.57
NECAP1-217ENST00000639276 USP31Q70CQ4 1352 aa11.48□□□□□ -0.57
NECAP1-217ENST00000639276 FTSJ3Q8IY81 847 aaKnown RBP11.47□□□□□ -0.57
NECAP1-217ENST00000639276 DZIP1LQ8IYY4 767 aaKnown RBP11.47□□□□□ -0.57
NECAP1-217ENST00000639276 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
NECAP1-217ENST00000639276 ADAMTSL3P82987 1691 aa11.47□□□□□ -0.57
NECAP1-217ENST00000639276 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-217ENST00000639276 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
NECAP1-217ENST00000639276 TTC21AQ8NDW8 1320 aa11.47□□□□□ -0.57
NECAP1-217ENST00000639276 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.57
NECAP1-217ENST00000639276 FOXO3O43524 673 aa11.46□□□□□ -0.58
NECAP1-217ENST00000639276 PLEKHG5O94827 1062 aa11.46□□□□□ -0.58
NECAP1-217ENST00000639276 ATF7IPQ6VMQ6 1270 aa11.46□□□□□ -0.58
NECAP1-217ENST00000639276 MCM10Q7L590 875 aa11.46□□□□□ -0.58
NECAP1-217ENST00000639276 ABTB2Q8N961 1025 aa11.46□□□□□ -0.58
NECAP1-217ENST00000639276 ANP32EQ9BTT0 268 aa11.46□□□□□ -0.58
NECAP1-217ENST00000639276 VAMP4O75379 141 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 AMPHP49418 695 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 C8orf58Q8NAV2 365 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 NALCNQ8IZF0 1738 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 TMEM57Q8N5G2 664 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 PIK3C2AO00443 1686 aa11.45□□□□□ -0.58
NECAP1-217ENST00000639276 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
NECAP1-217ENST00000639276 GNAI1P63096 354 aa11.44□□□□□ -0.58
NECAP1-217ENST00000639276 KRT24Q2M2I5 525 aa11.44□□□□□ -0.58
NECAP1-217ENST00000639276 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
NECAP1-217ENST00000639276 SETD1BQ9UPS6 1966 aaKnown RBP11.44□□□□□ -0.58
NECAP1-217ENST00000639276 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
NECAP1-217ENST00000639276 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
NECAP1-217ENST00000639276 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
NECAP1-217ENST00000639276 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
NECAP1-217ENST00000639276 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
NECAP1-217ENST00000639276 ANP32AP39687 249 aaKnown RBP11.43□□□□□ -0.58
NECAP1-217ENST00000639276 XPCQ01831 940 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-217ENST00000639276 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-217ENST00000639276 EYA1Q99502 592 aa11.43□□□□□ -0.58
NECAP1-217ENST00000639276 MIS18AQ9NYP9 233 aa11.43□□□□□ -0.58
NECAP1-217ENST00000639276 ANKARQ7Z5J8 1434 aa11.43□□□□□ -0.58
NECAP1-217ENST00000639276 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
NECAP1-217ENST00000639276 ZNF142P52746 1687 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-217ENST00000639276 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
NECAP1-217ENST00000639276 TWISTNBQ3B726 338 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-217ENST00000639276 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
NECAP1-217ENST00000639276 SBNO1A3KN83 1393 aa11.42□□□□□ -0.58
NECAP1-217ENST00000639276 FLT4P35916 1363 aa11.42□□□□□ -0.58
NECAP1-217ENST00000639276 CALD1Q05682 793 aaKnown RBP11.41□□□□□ -0.58
NECAP1-217ENST00000639276 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
NECAP1-217ENST00000639276 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
NECAP1-217ENST00000639276 MRPL50Q8N5N7 158 aaKnown RBP11.41□□□□□ -0.58
NECAP1-217ENST00000639276 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
NECAP1-217ENST00000639276 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
NECAP1-217ENST00000639276 HOXC9P31274 260 aa11.41□□□□□ -0.58
NECAP1-217ENST00000639276 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
NECAP1-217ENST00000639276 RGPD1P0DJD0 1748 aa11.4□□□□□ -0.58
NECAP1-217ENST00000639276 PSME1Q06323 249 aa11.4□□□□□ -0.58
NECAP1-217ENST00000639276 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
NECAP1-217ENST00000639276 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
NECAP1-217ENST00000639276 KIF16BQ96L93 1317 aa11.4□□□□□ -0.58
NECAP1-217ENST00000639276 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
NECAP1-217ENST00000639276 MARF1Q9Y4F3 1742 aaKnown RBP11.39□□□□□ -0.59
NECAP1-217ENST00000639276 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
NECAP1-217ENST00000639276 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
NECAP1-217ENST00000639276 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
NECAP1-217ENST00000639276 RWDD1Q9H446 243 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-217ENST00000639276 ZBTB40Q9NUA8 1239 aa11.39□□□□□ -0.59
NECAP1-217ENST00000639276 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
NECAP1-217ENST00000639276 CHL1O00533 1208 aa11.38□□□□□ -0.59
NECAP1-217ENST00000639276 ADGRL3Q9HAR2 1447 aa11.38□□□□□ -0.59
NECAP1-217ENST00000639276 ARHGEF10O15013 1369 aa11.38□□□□□ -0.59
NECAP1-217ENST00000639276 C1orf115Q9H7X2 142 aa11.38□□□□□ -0.59
NECAP1-217ENST00000639276 AAMPQ13685 434 aa11.37□□□□□ -0.59
NECAP1-217ENST00000639276 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
NECAP1-217ENST00000639276 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-217ENST00000639276 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-217ENST00000639276 ZNF428Q96B54 188 aa11.37□□□□□ -0.59
NECAP1-217ENST00000639276 SEC24BO95487 1268 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms