RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
SMARCA2-245ENST00000635688 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
SMARCA2-245ENST00000635688 PTPRGP23470 1445 aa13.42□□□□□ -0.26
SMARCA2-245ENST00000635688 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
SMARCA2-245ENST00000635688 AK7Q96M32 723 aa13.41□□□□□ -0.26
SMARCA2-245ENST00000635688 MAP10Q9P2G4 905 aa13.41□□□□□ -0.26
SMARCA2-245ENST00000635688 TTBK1Q5TCY1 1321 aaPredicted RBP13.4□□□□□ -0.26
SMARCA2-245ENST00000635688 CTHP32929 405 aa13.4□□□□□ -0.26
SMARCA2-245ENST00000635688 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
SMARCA2-245ENST00000635688 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
SMARCA2-245ENST00000635688 WIPF1O43516 503 aa13.39□□□□□ -0.27
SMARCA2-245ENST00000635688 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
SMARCA2-245ENST00000635688 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
SMARCA2-245ENST00000635688 GLI2P10070 1586 aa13.39□□□□□ -0.27
SMARCA2-245ENST00000635688 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
SMARCA2-245ENST00000635688 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 F12P00748 615 aaPredicted RBP13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 VARSP26640 1264 aaKnown RBP13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
SMARCA2-245ENST00000635688 FOXJ1Q92949 421 aa13.37□□□□□ -0.27
SMARCA2-245ENST00000635688 LIMD1Q9UGP4 676 aa13.37□□□□□ -0.27
SMARCA2-245ENST00000635688 NNTQ13423 1086 aa13.36□□□□□ -0.27
SMARCA2-245ENST00000635688 IGF1RP08069 1367 aa13.35□□□□□ -0.27
SMARCA2-245ENST00000635688 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
SMARCA2-245ENST00000635688 PDE4DQ08499 809 aa13.35□□□□□ -0.27
SMARCA2-245ENST00000635688 QPCTQ16769 361 aa13.35□□□□□ -0.27
SMARCA2-245ENST00000635688 MPNDQ8N594 471 aa13.34□□□□□ -0.27
SMARCA2-245ENST00000635688 C4orf48Q5BLP8 95 aa13.33□□□□□ -0.28
SMARCA2-245ENST00000635688 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
SMARCA2-245ENST00000635688 MYSM1Q5VVJ2 828 aa13.33□□□□□ -0.28
SMARCA2-245ENST00000635688 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
SMARCA2-245ENST00000635688 ZFP42Q96MM3 310 aa13.33□□□□□ -0.28
SMARCA2-245ENST00000635688 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
SMARCA2-245ENST00000635688 CUL7Q14999 1698 aa13.31□□□□□ -0.28
SMARCA2-245ENST00000635688 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
SMARCA2-245ENST00000635688 TIMP2P16035 220 aa13.31□□□□□ -0.28
SMARCA2-245ENST00000635688 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
SMARCA2-245ENST00000635688 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
SMARCA2-245ENST00000635688 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
SMARCA2-245ENST00000635688 EPRSP07814 1512 aaKnown RBP13.3□□□□□ -0.28
SMARCA2-245ENST00000635688 VEGFBP49765 207 aa13.3□□□□□ -0.28
SMARCA2-245ENST00000635688 NXF1Q9UBU9 619 aaKnown RBP13.3□□□□□ -0.28
SMARCA2-245ENST00000635688 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
SMARCA2-245ENST00000635688 MAP3K4Q9Y6R4 1608 aa13.29□□□□□ -0.28
SMARCA2-245ENST00000635688 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
SMARCA2-245ENST00000635688 WDR4P57081 412 aaKnown RBP13.28□□□□□ -0.28
SMARCA2-245ENST00000635688 FAM174AQ8TBP5 190 aa13.28□□□□□ -0.28
SMARCA2-245ENST00000635688 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
SMARCA2-245ENST00000635688 LILRB3O75022 631 aa13.27□□□□□ -0.29
SMARCA2-245ENST00000635688 ADH1CP00326 375 aa13.27□□□□□ -0.29
SMARCA2-245ENST00000635688 TSC1Q92574 1164 aa13.27□□□□□ -0.29
SMARCA2-245ENST00000635688 CDK15Q96Q40 435 aa13.27□□□□□ -0.29
SMARCA2-245ENST00000635688 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
SMARCA2-245ENST00000635688 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
SMARCA2-245ENST00000635688 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
SMARCA2-245ENST00000635688 NR3C2P08235 984 aa13.25□□□□□ -0.29
SMARCA2-245ENST00000635688 INSM1Q01101 510 aaPredicted RBP13.25□□□□□ -0.29
SMARCA2-245ENST00000635688 ARID5BQ14865 1188 aa13.25□□□□□ -0.29
SMARCA2-245ENST00000635688 MRPL14Q6P1L8 145 aaKnown RBP13.25□□□□□ -0.29
SMARCA2-245ENST00000635688 PURBQ96QR8 312 aaKnown RBP13.25□□□□□ -0.29
SMARCA2-245ENST00000635688 NUTM2BA6NNL0 878 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-245ENST00000635688 NUTM2EB1AL46 878 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-245ENST00000635688 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-245ENST00000635688 NUTM2AQ8IVF1 878 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-245ENST00000635688 ZFAND3Q9H8U3 227 aa13.24□□□□□ -0.29
SMARCA2-245ENST00000635688 STK17AQ9UEE5 414 aa13.24□□□□□ -0.29
SMARCA2-245ENST00000635688 SOBPA7XYQ1 873 aa13.23□□□□□ -0.29
SMARCA2-245ENST00000635688 GRM5P41594 1212 aa13.23□□□□□ -0.29
SMARCA2-245ENST00000635688 TUSC1Q2TAM9 212 aa13.23□□□□□ -0.29
SMARCA2-245ENST00000635688 IQGAP2Q13576 1575 aa13.23□□□□□ -0.29
SMARCA2-245ENST00000635688 GMPRP36959 345 aa13.22□□□□□ -0.29
SMARCA2-245ENST00000635688 ITPKCQ96DU7 683 aa13.22□□□□□ -0.29
SMARCA2-245ENST00000635688 DISP1Q96F81 1524 aa13.22□□□□□ -0.29
SMARCA2-245ENST00000635688 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
SMARCA2-245ENST00000635688 AGERQ15109 404 aa13.21□□□□□ -0.29
SMARCA2-245ENST00000635688 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
SMARCA2-245ENST00000635688 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.3
SMARCA2-245ENST00000635688 H3BM21 787 aa13.2□□□□□ -0.3
SMARCA2-245ENST00000635688 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
SMARCA2-245ENST00000635688 LORP23490 312 aaPredicted RBP13.19□□□□□ -0.3
SMARCA2-245ENST00000635688 SH3RF1Q7Z6J0 888 aa13.19□□□□□ -0.3
SMARCA2-245ENST00000635688 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
SMARCA2-245ENST00000635688 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
SMARCA2-245ENST00000635688 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
SMARCA2-245ENST00000635688 POLR3EQ9NVU0 708 aa13.18□□□□□ -0.3
SMARCA2-245ENST00000635688 CD109Q6YHK3 1445 aa13.17□□□□□ -0.3
SMARCA2-245ENST00000635688 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
SMARCA2-245ENST00000635688 C1QTNF2Q9BXJ5 285 aa13.17□□□□□ -0.3
SMARCA2-245ENST00000635688 NR5A1Q13285 461 aa13.16□□□□□ -0.3
SMARCA2-245ENST00000635688 SCARF1Q14162 830 aa13.16□□□□□ -0.3
SMARCA2-245ENST00000635688 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
SMARCA2-245ENST00000635688 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-245ENST00000635688 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
SMARCA2-245ENST00000635688 IRF7Q92985 503 aa13.14□□□□□ -0.31
SMARCA2-245ENST00000635688 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
SMARCA2-245ENST00000635688 KIF21BO75037 1637 aa13.13□□□□□ -0.31
SMARCA2-245ENST00000635688 C6orf118Q5T5N4 469 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms