RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 KIF16BQ96L93 1317 aa10.27□□□□□ -0.76
GPC3-204ENST00000631057 CPS1P31327 1500 aa10.27□□□□□ -0.76
GPC3-204ENST00000631057 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.76
GPC3-204ENST00000631057 PDZRN3Q9UPQ7 1066 aa10.27□□□□□ -0.76
GPC3-204ENST00000631057 TECPR2O15040 1411 aa10.27□□□□□ -0.77
GPC3-204ENST00000631057 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
GPC3-204ENST00000631057 C3P01024 1663 aa10.27□□□□□ -0.77
GPC3-204ENST00000631057 IPO8O15397 1037 aaKnown RBP10.26□□□□□ -0.77
GPC3-204ENST00000631057 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
GPC3-204ENST00000631057 CALD1Q05682 793 aaKnown RBP10.26□□□□□ -0.77
GPC3-204ENST00000631057 ALDH1L2Q3SY69 923 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 ATF7IPQ6VMQ6 1270 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 WAPLQ7Z5K2 1190 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 SSH1Q8WYL5 1049 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 ZNF428Q96B54 188 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 SIRT1Q96EB6 747 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 PPIP5K1Q6PFW1 1433 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 WASLO00401 505 aaPredicted RBP10.26□□□□□ -0.77
GPC3-204ENST00000631057 TRIM27P14373 513 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.772e-7■■□□□ 12.6
GPC3-204ENST00000631057 RSPH6AQ9H0K4 717 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 UPF2Q9HAU5 1272 aaKnown RBP10.26□□□□□ -0.77
GPC3-204ENST00000631057 POLKQ9UBT6 870 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 UBR1Q8IWV7 1749 aa10.26□□□□□ -0.77
GPC3-204ENST00000631057 AATKQ6ZMQ8 1374 aa10.25□□□□□ -0.77
GPC3-204ENST00000631057 USP19O94966 1318 aa10.25□□□□□ -0.77
GPC3-204ENST00000631057 HDAC1Q13547 482 aaPredicted RBP10.25□□□□□ -0.77
GPC3-204ENST00000631057 BECN1Q14457 450 aa10.25□□□□□ -0.77
GPC3-204ENST00000631057 PRKAR2BP31323 418 aa10.24□□□□□ -0.77
GPC3-204ENST00000631057 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
GPC3-204ENST00000631057 MLECQ14165 292 aa10.24□□□□□ -0.77
GPC3-204ENST00000631057 NFE2L2Q16236 605 aa10.24□□□□□ -0.77
GPC3-204ENST00000631057 ITPRIPQ8IWB1 547 aa10.24□□□□□ -0.77
GPC3-204ENST00000631057 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
GPC3-204ENST00000631057 NFKBIBQ15653 356 aa10.23□□□□□ -0.77
GPC3-204ENST00000631057 SPOCK2Q92563 424 aa10.23□□□□□ -0.77
GPC3-204ENST00000631057 NOB1Q9ULX3 412 aaKnown RBP10.23□□□□□ -0.77
GPC3-204ENST00000631057 METP08581 1390 aa10.23□□□□□ -0.77
GPC3-204ENST00000631057 TNRQ92752 1358 aa10.23□□□□□ -0.77
GPC3-204ENST00000631057 NRKQ7Z2Y5 1582 aa10.23□□□□□ -0.77
GPC3-204ENST00000631057 LMOD3Q0VAK6 560 aa10.22□□□□□ -0.77
GPC3-204ENST00000631057 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
GPC3-204ENST00000631057 GNAI1P63096 354 aa10.22□□□□□ -0.77
GPC3-204ENST00000631057 NUDT16Q96DE0 195 aaKnown RBP10.22□□□□□ -0.77
GPC3-204ENST00000631057 COG3Q96JB2 828 aa10.22□□□□□ -0.77
GPC3-204ENST00000631057 CHMP4BQ9H444 224 aaKnown RBP10.22□□□□□ -0.77
GPC3-204ENST00000631057 CCDC61Q9Y6R9 512 aa10.22□□□□□ -0.77
GPC3-204ENST00000631057 SEC24BO95487 1268 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 IL13P35225 146 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 NME9Q86XW9 330 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 TBC1D32Q96NH3 1257 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.78
GPC3-204ENST00000631057 ZBTB40Q9NUA8 1239 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 IFT57Q9NWB7 429 aa10.21□□□□□ -0.78
GPC3-204ENST00000631057 NALCNQ8IZF0 1738 aa10.2□□□□□ -0.78
GPC3-204ENST00000631057 TXNDC2Q86VQ3 553 aa10.2□□□□□ -0.78
GPC3-204ENST00000631057 SMC5Q8IY18 1101 aa10.2□□□□□ -0.78
GPC3-204ENST00000631057 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
GPC3-204ENST00000631057 PTCH1Q13635 1447 aa10.2□□□□□ -0.78
GPC3-204ENST00000631057 PIK3R4Q99570 1358 aa10.19□□□□□ -0.78
GPC3-204ENST00000631057 TMEM2Q9UHN6 1383 aa10.19□□□□□ -0.78
GPC3-204ENST00000631057 HMOX1P09601 288 aa10.19□□□□□ -0.78
GPC3-204ENST00000631057 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
GPC3-204ENST00000631057 ARHGAP45Q92619 1136 aa10.19□□□□□ -0.78
GPC3-204ENST00000631057 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
GPC3-204ENST00000631057 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
GPC3-204ENST00000631057 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.18□□□□□ -0.78
GPC3-204ENST00000631057 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
GPC3-204ENST00000631057 FBLN1P23142 703 aa10.18□□□□□ -0.78
GPC3-204ENST00000631057 PLEKHG1Q9ULL1 1385 aa10.17□□□□□ -0.78
GPC3-204ENST00000631057 ADAMTS13Q76LX8 1427 aa10.17□□□□□ -0.78
GPC3-204ENST00000631057 RGL2O15211 777 aa10.17□□□□□ -0.78
GPC3-204ENST00000631057 VAMP4O75379 141 aa10.17□□□□□ -0.78
GPC3-204ENST00000631057 MRPL50Q8N5N7 158 aaKnown RBP10.17□□□□□ -0.78
GPC3-204ENST00000631057 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
GPC3-204ENST00000631057 NUCB1Q02818 461 aa10.16□□□□□ -0.78
GPC3-204ENST00000631057 GSE1Q14687 1217 aa10.16□□□□□ -0.78
GPC3-204ENST00000631057 PRR36Q9H6K5 1346 aa10.16□□□□□ -0.78
GPC3-204ENST00000631057 ROBO2Q9HCK4 1378 aa10.16□□□□□ -0.78
GPC3-204ENST00000631057 RGPD1P0DJD0 1748 aa10.15□□□□□ -0.78
GPC3-204ENST00000631057 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
GPC3-204ENST00000631057 ABCC4O15439 1325 aa10.15□□□□□ -0.78
GPC3-204ENST00000631057 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.78
GPC3-204ENST00000631057 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
GPC3-204ENST00000631057 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.78
GPC3-204ENST00000631057 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.78
GPC3-204ENST00000631057 FRAT2O75474 233 aaPredicted RBP10.14□□□□□ -0.79
GPC3-204ENST00000631057 RRS1Q15050 365 aaKnown RBP10.14□□□□□ -0.79
GPC3-204ENST00000631057 TWISTNBQ3B726 338 aaPredicted RBP10.14□□□□□ -0.79
GPC3-204ENST00000631057 GCC1Q96CN9 775 aa10.14□□□□□ -0.79
GPC3-204ENST00000631057 THUMPD2Q9BTF0 503 aaKnown RBP10.14□□□□□ -0.79
GPC3-204ENST00000631057 API5Q9BZZ5 524 aaKnown RBP10.14□□□□□ -0.79
GPC3-204ENST00000631057 TTC21BQ7Z4L5 1316 aa10.14□□□□□ -0.79
GPC3-204ENST00000631057 PEAK1Q9H792 1746 aa10.14□□□□□ -0.79
GPC3-204ENST00000631057 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
GPC3-204ENST00000631057 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
GPC3-204ENST00000631057 TSPYL6Q8N831 410 aa10.14□□□□□ -0.79
GPC3-204ENST00000631057 C22orf23Q9BZE7 217 aa10.14□□□□□ -0.79
GPC3-204ENST00000631057 USP6P35125 1406 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms