RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 EYA1Q99502 592 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
PKP4-217ENST00000628904 EFCAB6Q5THR3 1501 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 IL13P35225 146 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 ATF3P18847 181 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 NFKBIBQ15653 356 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
PKP4-217ENST00000628904 VAMP4O75379 141 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 MEIS3Q99687 375 aa9.37□□□□□ -0.91
PKP4-217ENST00000628904 HSCBQ8IWL3 235 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 C22orf23Q9BZE7 217 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 RNF17Q9BXT8 1623 aaKnown RBP9.36□□□□□ -0.91
PKP4-217ENST00000628904 MADDQ8WXG6 1647 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
PKP4-217ENST00000628904 PLEKHF1Q96S99 279 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 PPRC1Q5VV67 1664 aaKnown RBP9.36□□□□□ -0.91
PKP4-217ENST00000628904 KIDINS220Q9ULH0 1771 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 SLC39A6Q13433 755 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 NEO1Q92859 1461 aa9.36□□□□□ -0.91
PKP4-217ENST00000628904 OTUD7AQ8TE49 926 aaPredicted RBP9.35□□□□□ -0.91
PKP4-217ENST00000628904 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
PKP4-217ENST00000628904 HECW2Q9P2P5 1572 aa9.35□□□□□ -0.91
PKP4-217ENST00000628904 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
PKP4-217ENST00000628904 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
PKP4-217ENST00000628904 SIL1Q9H173 461 aa9.35□□□□□ -0.91
PKP4-217ENST00000628904 ABCA9Q8IUA7 1624 aa9.35□□□□□ -0.91
PKP4-217ENST00000628904 CHD1LQ86WJ1 897 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
PKP4-217ENST00000628904 API5Q9BZZ5 524 aaKnown RBP9.34□□□□□ -0.91
PKP4-217ENST00000628904 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 ABCC11Q96J66 1382 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 SPHKAPQ2M3C7 1700 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
PKP4-217ENST00000628904 LGR6Q9HBX8 967 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 ABCA6Q8N139 1617 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 TMEM2Q9UHN6 1383 aa9.34□□□□□ -0.91
PKP4-217ENST00000628904 PTCD1O75127 700 aaKnown RBP9.33□□□□□ -0.92
PKP4-217ENST00000628904 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
PKP4-217ENST00000628904 TET3O43151 1660 aa9.33□□□□□ -0.92
PKP4-217ENST00000628904 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
PKP4-217ENST00000628904 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
PKP4-217ENST00000628904 KCNQ3O43525 872 aa9.33□□□□□ -0.92
PKP4-217ENST00000628904 SURF6O75683 361 aaKnown RBP9.33□□□□□ -0.92
PKP4-217ENST00000628904 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
PKP4-217ENST00000628904 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
PKP4-217ENST00000628904 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
PKP4-217ENST00000628904 MAP3K4Q9Y6R4 1608 aa9.33□□□□□ -0.92
PKP4-217ENST00000628904 KCNJ4P48050 445 aa9.32□□□□□ -0.92
PKP4-217ENST00000628904 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
PKP4-217ENST00000628904 NAP1L2Q9ULW6 460 aaPredicted RBP9.32□□□□□ -0.92
PKP4-217ENST00000628904 GNAT3A8MTJ3 354 aa9.32□□□□□ -0.92
PKP4-217ENST00000628904 SETD1BQ9UPS6 1966 aaKnown RBP9.32□□□□□ -0.92
PKP4-217ENST00000628904 EVA1CP58658 441 aa9.32□□□□□ -0.92
PKP4-217ENST00000628904 IFT57Q9NWB7 429 aa9.32□□□□□ -0.92
PKP4-217ENST00000628904 BTBD11A6QL63 1104 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
PKP4-217ENST00000628904 KIF1BO60333 1816 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 EIF5BO60841 1220 aaKnown RBP9.31□□□□□ -0.92
PKP4-217ENST00000628904 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 ANO2Q9NQ90 1003 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 KRT28Q7Z3Y7 464 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 NBPF6Q5VWK0 638 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 NBPF4Q96M43 638 aa9.31□□□□□ -0.92
PKP4-217ENST00000628904 KDM5AP29375 1690 aaKnown RBP9.3□□□□□ -0.92
PKP4-217ENST00000628904 MYOM2P54296 1465 aa9.3□□□□□ -0.92
PKP4-217ENST00000628904 UBTFL1P0CB47 393 aaPredicted RBP9.3□□□□□ -0.92
PKP4-217ENST00000628904 TAF7Q15545 349 aaPredicted RBP9.3□□□□□ -0.92
PKP4-217ENST00000628904 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
PKP4-217ENST00000628904 INSRP06213 1382 aa9.3□□□□□ -0.92
PKP4-217ENST00000628904 INO80Q9ULG1 1556 aaPredicted RBP9.3□□□□□ -0.92
PKP4-217ENST00000628904 ZBTB40Q9NUA8 1239 aa9.3□□□□□ -0.92
PKP4-217ENST00000628904 LRRFIP2Q9Y608 721 aaKnown RBP9.3□□□□□ -0.92
PKP4-217ENST00000628904 SYNMO15061 1565 aa9.3□□□□□ -0.92
PKP4-217ENST00000628904 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
PKP4-217ENST00000628904 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 HMMRO75330 724 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 HOXC9P31274 260 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 CCDC27Q2M243 656 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 FRMPD1Q5SYB0 1578 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 A2ML1A8K2U0 1454 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 PI4KAP2A4QPH2 592 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 FLIIQ13045 1269 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 TOM1L2Q6ZVM7 507 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 PI4KAP1Q8N8J0 262 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
PKP4-217ENST00000628904 NSD2O96028 1365 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
PKP4-217ENST00000628904 SRGAP3O43295 1099 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 CHPF2Q9P2E5 772 aa9.29□□□□□ -0.92
PKP4-217ENST00000628904 TULP4Q9NRJ4 1543 aa9.28□□□□□ -0.92
PKP4-217ENST00000628904 NUTM2BA6NNL0 878 aaPredicted RBP9.28□□□□□ -0.92
PKP4-217ENST00000628904 NUTM2EB1AL46 878 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms