RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 PKNOX2Q96KN3 472 aa14.3□□□□□ -0.12
CHD2-205ENST00000625662 ACEP12821 1306 aa14.29□□□□□ -0.12
CHD2-205ENST00000625662 SART3Q15020 963 aaKnown RBP14.29□□□□□ -0.12
CHD2-205ENST00000625662 RALYLQ86SE5 291 aaKnown RBP14.29□□□□□ -0.12
CHD2-205ENST00000625662 FAM184AQ8NB25 1140 aa14.29□□□□□ -0.12
CHD2-205ENST00000625662 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
CHD2-205ENST00000625662 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
CHD2-205ENST00000625662 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
CHD2-205ENST00000625662 SYAP1Q96A49 352 aaPredicted RBP14.29□□□□□ -0.12
CHD2-205ENST00000625662 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
CHD2-205ENST00000625662 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 CCDC47Q96A33 483 aaKnown RBP14.28□□□□□ -0.12
CHD2-205ENST00000625662 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 CPLX1O14810 134 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 GBP4Q96PP9 640 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 DISP1Q96F81 1524 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 TTC39AQ5SRH9 613 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
CHD2-205ENST00000625662 BICDL1Q6ZP65 573 aa14.27□□□□□ -0.12
CHD2-205ENST00000625662 RFC4P35249 363 aa14.27□□□□□ -0.13
CHD2-205ENST00000625662 NFXL1Q6ZNB6 911 aa14.27□□□□□ -0.13
CHD2-205ENST00000625662 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHD2-205ENST00000625662 ST5P78524 1137 aa14.27□□□□□ -0.13
CHD2-205ENST00000625662 GNAI2P04899 355 aa14.26□□□□□ -0.13
CHD2-205ENST00000625662 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
CHD2-205ENST00000625662 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
CHD2-205ENST00000625662 RPRD2Q5VT52 1461 aaKnown RBP14.26□□□□□ -0.13
CHD2-205ENST00000625662 H3BQV1 296 aa14.26□□□□□ -0.13
CHD2-205ENST00000625662 IKQ13123 557 aaPredicted RBP14.26□□□□□ -0.13
CHD2-205ENST00000625662 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
CHD2-205ENST00000625662 TAF7Q15545 349 aaPredicted RBP14.26□□□□□ -0.13
CHD2-205ENST00000625662 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
CHD2-205ENST00000625662 NME9Q86XW9 330 aa14.26□□□□□ -0.13
CHD2-205ENST00000625662 ARHGEF10O15013 1369 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 MYL6BP14649 208 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
CHD2-205ENST00000625662 ZCRB1Q8TBF4 217 aaKnown RBP14.25□□□□□ -0.13
CHD2-205ENST00000625662 ATP6V1DQ9Y5K8 247 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 XBP1P17861 261 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 SLF2Q8IX21 1173 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
CHD2-205ENST00000625662 ABCC11Q96J66 1382 aa14.24□□□□□ -0.13
CHD2-205ENST00000625662 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
CHD2-205ENST00000625662 ANKRD36BQ8N2N9 1353 aa14.24□□□□□ -0.13
CHD2-205ENST00000625662 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
CHD2-205ENST00000625662 BRMS1Q9HCU9 246 aa14.24□□□□□ -0.13
CHD2-205ENST00000625662 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
CHD2-205ENST00000625662 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
CHD2-205ENST00000625662 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
CHD2-205ENST00000625662 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
CHD2-205ENST00000625662 PLCB2Q00722 1185 aa14.23□□□□□ -0.13
CHD2-205ENST00000625662 PPP1R42Q7Z4L9 355 aa14.23□□□□□ -0.13
CHD2-205ENST00000625662 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
CHD2-205ENST00000625662 SAFBQ15424 915 aaKnown RBP eCLIP14.23□□□□□ -0.13
CHD2-205ENST00000625662 FYB1O15117 783 aa14.23□□□□□ -0.13
CHD2-205ENST00000625662 IL2RBP14784 551 aa14.23□□□□□ -0.13
CHD2-205ENST00000625662 SURF6O75683 361 aaKnown RBP14.22□□□□□ -0.13
CHD2-205ENST00000625662 BAG6P46379 1132 aa14.22□□□□□ -0.13
CHD2-205ENST00000625662 ADAMTS8Q9UP79 889 aa14.22□□□□□ -0.13
CHD2-205ENST00000625662 RRP1P56182 461 aaKnown RBP14.22□□□□□ -0.13
CHD2-205ENST00000625662 CAVIN4Q5BKX8 364 aa14.21□□□□□ -0.13
CHD2-205ENST00000625662 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
CHD2-205ENST00000625662 AKAP2Q9Y2D5 859 aa14.21□□□□□ -0.13
CHD2-205ENST00000625662 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
CHD2-205ENST00000625662 ANO2Q9NQ90 1003 aa14.21□□□□□ -0.13
CHD2-205ENST00000625662 HYPKQ9NX55 129 aa14.21□□□□□ -0.13
CHD2-205ENST00000625662 FSD1Q9BTV5 496 aa14.21□□□□□ -0.14
CHD2-205ENST00000625662 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
CHD2-205ENST00000625662 TCOF1Q13428 1488 aaKnown RBP14.2□□□□□ -0.14
CHD2-205ENST00000625662 IFIT1P09914 478 aaKnown RBP14.2□□□□□ -0.14
CHD2-205ENST00000625662 ZNF772Q68DY9 489 aaPredicted RBP14.2□□□□□ -0.14
CHD2-205ENST00000625662 PPIP5K1Q6PFW1 1433 aa14.2□□□□□ -0.14
CHD2-205ENST00000625662 TPM2P07951 284 aa14.2□□□□□ -0.14
CHD2-205ENST00000625662 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
CHD2-205ENST00000625662 EXOSC9Q06265 439 aaKnown RBP14.19□□□□□ -0.14
CHD2-205ENST00000625662 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
CHD2-205ENST00000625662 TNNT3P45378 269 aaPredicted RBP14.19□□□□□ -0.14
CHD2-205ENST00000625662 WWC2Q6AWC2 1192 aa14.19□□□□□ -0.14
CHD2-205ENST00000625662 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
CHD2-205ENST00000625662 CDC5LQ99459 802 aaKnown RBP14.19□□□□□ -0.14
CHD2-205ENST00000625662 PSMA5P28066 241 aa14.19□□□□□ -0.14
CHD2-205ENST00000625662 SLAIN2Q9P270 581 aa14.19□□□□□ -0.14
CHD2-205ENST00000625662 DDX46Q7L014 1031 aaKnown RBP14.18□□□□□ -0.14
CHD2-205ENST00000625662 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
CHD2-205ENST00000625662 CEP89Q96ST8 783 aa14.18□□□□□ -0.14
CHD2-205ENST00000625662 IFT57Q9NWB7 429 aa14.18□□□□□ -0.14
CHD2-205ENST00000625662 R3HCC1Q9Y3T6 440 aaKnown RBP14.17□□□□□ -0.14
CHD2-205ENST00000625662 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
CHD2-205ENST00000625662 ANKIB1Q9P2G1 1089 aa14.17□□□□□ -0.14
CHD2-205ENST00000625662 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
CHD2-205ENST00000625662 EIF2AK4Q9P2K8 1649 aaKnown RBP14.17□□□□□ -0.14
CHD2-205ENST00000625662 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
CHD2-205ENST00000625662 TRMT112Q9UI30 125 aaKnown RBP14.17□□□□□ -0.14
CHD2-205ENST00000625662 NYXQ9GZU5 481 aa14.16□□□□□ -0.14
CHD2-205ENST00000625662 HOOK1Q9UJC3 728 aaKnown RBP14.16□□□□□ -0.14
CHD2-205ENST00000625662 SNRPA1P09661 255 aaKnown RBP14.16□□□□□ -0.14
CHD2-205ENST00000625662 DBF4Q9UBU7 674 aaPredicted RBP14.16□□□□□ -0.14
CHD2-205ENST00000625662 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms