RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
SMARCD2-212ENST00000613943 TTC21BQ7Z4L5 1316 aa25.22■■□□□ 1.63
SMARCD2-212ENST00000613943 AMOTL2Q9Y2J4 779 aa25.21■■□□□ 1.63
SMARCD2-212ENST00000613943 C3P01024 1663 aa25.2■■□□□ 1.62
SMARCD2-212ENST00000613943 AAMPQ13685 434 aa25.2■■□□□ 1.62
SMARCD2-212ENST00000613943 MBIPQ9NS73 344 aa25.2■■□□□ 1.62
SMARCD2-212ENST00000613943 EID1Q9Y6B2 187 aa25.2■■□□□ 1.62
SMARCD2-212ENST00000613943 DDX19BQ9UMR2 479 aa25.19■■□□□ 1.62
SMARCD2-212ENST00000613943 USP19O94966 1318 aa25.18■■□□□ 1.62
SMARCD2-212ENST00000613943 EIF4A2Q14240 407 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-212ENST00000613943 AKAP12Q02952 1782 aa25.17■■□□□ 1.62
SMARCD2-212ENST00000613943 ITSN1Q15811 1721 aa25.17■■□□□ 1.62
SMARCD2-212ENST00000613943 SULT6B1Q6IMI4 303 aa25.17■■□□□ 1.62
SMARCD2-212ENST00000613943 KIF16BQ96L93 1317 aa25.17■■□□□ 1.62
SMARCD2-212ENST00000613943 VAMP4O75379 141 aa25.17■■□□□ 1.62
SMARCD2-212ENST00000613943 HSP90AB2PQ58FF8 381 aa25.17■■□□□ 1.62
SMARCD2-212ENST00000613943 DEKP35659 375 aaKnown RBP25.16■■□□□ 1.62
SMARCD2-212ENST00000613943 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
SMARCD2-212ENST00000613943 ALDH1L2Q3SY69 923 aa25.14■■□□□ 1.61
SMARCD2-212ENST00000613943 C8orf58Q8NAV2 365 aa25.14■■□□□ 1.61
SMARCD2-212ENST00000613943 ZBTB40Q9NUA8 1239 aa25.13■■□□□ 1.61
SMARCD2-212ENST00000613943 IFT57Q9NWB7 429 aa25.13■■□□□ 1.61
SMARCD2-212ENST00000613943 USP6P35125 1406 aa25.13■■□□□ 1.61
SMARCD2-212ENST00000613943 PLEKHG3A1L390 1219 aa25.13■■□□□ 1.61
SMARCD2-212ENST00000613943 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
SMARCD2-212ENST00000613943 DAXXQ9UER7 740 aaPredicted RBP25.13■■□□□ 1.61
SMARCD2-212ENST00000613943 GNAI1P63096 354 aa25.12■■□□□ 1.61
SMARCD2-212ENST00000613943 ZNF853P0CG23 659 aa25.12■■□□□ 1.61
SMARCD2-212ENST00000613943 C1orf115Q9H7X2 142 aa25.12■■□□□ 1.61
SMARCD2-212ENST00000613943 OVOS2A0A0J9YW53 1432 aa25.11■■□□□ 1.61
SMARCD2-212ENST00000613943 OVOS2Q6IE36 1432 aa25.11■■□□□ 1.61
SMARCD2-212ENST00000613943 MRPL50Q8N5N7 158 aaKnown RBP25.11■■□□□ 1.61
SMARCD2-212ENST00000613943 KRT24Q2M2I5 525 aa25.1■■□□□ 1.61
SMARCD2-212ENST00000613943 TWISTNBQ3B726 338 aaPredicted RBP25.1■■□□□ 1.61
SMARCD2-212ENST00000613943 CALD1Q05682 793 aaKnown RBP25.09■■□□□ 1.61
SMARCD2-212ENST00000613943 MCM10Q7L590 875 aa25.09■■□□□ 1.61
SMARCD2-212ENST00000613943 CFAP44Q96MT7 982 aa25.09■■□□□ 1.61
SMARCD2-212ENST00000613943 HDAC1Q13547 482 aaPredicted RBP25.08■■□□□ 1.61
SMARCD2-212ENST00000613943 NRKQ7Z2Y5 1582 aa25.08■■□□□ 1.61
SMARCD2-212ENST00000613943 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
SMARCD2-212ENST00000613943 DLG5Q8TDM6 1919 aa25.07■■□□□ 1.6
SMARCD2-212ENST00000613943 NGDNQ8NEJ9 315 aaKnown RBP25.07■■□□□ 1.6
SMARCD2-212ENST00000613943 TOPAZ1Q8N9V7 1692 aa25.07■■□□□ 1.6
SMARCD2-212ENST00000613943 NUTM2GQ5VZR2 741 aa25.06■■□□□ 1.6
SMARCD2-212ENST00000613943 TBX22Q9Y458 520 aa25.06■■□□□ 1.6
SMARCD2-212ENST00000613943 LMOD3Q0VAK6 560 aa25.05■■□□□ 1.6
SMARCD2-212ENST00000613943 PEAK1Q9H792 1746 aa25.05■■□□□ 1.6
SMARCD2-212ENST00000613943 VIRMAQ69YN4 1812 aaKnown RBP25.05■■□□□ 1.6
SMARCD2-212ENST00000613943 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
SMARCD2-212ENST00000613943 MAP3K19Q56UN5 1328 aa25.04■■□□□ 1.6
SMARCD2-212ENST00000613943 KCNA6P17658 529 aa25.04■■□□□ 1.6
SMARCD2-212ENST00000613943 THEMISQ8N1K5 641 aaPredicted RBP25.04■■□□□ 1.6
SMARCD2-212ENST00000613943 ARHGAP23Q9P227 1491 aa25.04■■□□□ 1.6
SMARCD2-212ENST00000613943 SLIT1O75093 1534 aa25.03■■□□□ 1.6
SMARCD2-212ENST00000613943 ZBTB7BO15156 539 aaPredicted RBP25.02■■□□□ 1.6
SMARCD2-212ENST00000613943 FOXO3O43524 673 aa25.02■■□□□ 1.6
SMARCD2-212ENST00000613943 SMC5Q8IY18 1101 aa25.02■■□□□ 1.6
SMARCD2-212ENST00000613943 SSH2Q76I76 1423 aa25.02■■□□□ 1.6
SMARCD2-212ENST00000613943 LNPKQ9C0E8 428 aa25.02■■□□□ 1.6
SMARCD2-212ENST00000613943 BRPF1P55201 1214 aaPredicted RBP25.01■■□□□ 1.59
SMARCD2-212ENST00000613943 ZNF428Q96B54 188 aa25.01■■□□□ 1.59
SMARCD2-212ENST00000613943 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
SMARCD2-212ENST00000613943 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
SMARCD2-212ENST00000613943 USP31Q70CQ4 1352 aa24.99■■□□□ 1.59
SMARCD2-212ENST00000613943 RGPD8O14715 1765 aaPredicted RBP24.99■■□□□ 1.59
SMARCD2-212ENST00000613943 DIP2AQ14689 1571 aa24.98■■□□□ 1.59
SMARCD2-212ENST00000613943 PTCH1Q13635 1447 aa24.98■■□□□ 1.59
SMARCD2-212ENST00000613943 BCL11AQ9H165 835 aa24.97■■□□□ 1.59
SMARCD2-212ENST00000613943 NFKBIBQ15653 356 aa24.96■■□□□ 1.59
SMARCD2-212ENST00000613943 ABCC4O15439 1325 aa24.95■■□□□ 1.59
SMARCD2-212ENST00000613943 AMPHP49418 695 aa24.95■■□□□ 1.58
SMARCD2-212ENST00000613943 MFAP1P55081 439 aaKnown RBP24.95■■□□□ 1.58
SMARCD2-212ENST00000613943 NLRP6P59044 892 aa24.95■■□□□ 1.58
SMARCD2-212ENST00000613943 ARHGAP45Q92619 1136 aa24.95■■□□□ 1.58
SMARCD2-212ENST00000613943 SIRT2Q8IXJ6 389 aa24.95■■□□□ 1.58
SMARCD2-212ENST00000613943 TBC1D32Q96NH3 1257 aa24.95■■□□□ 1.58
SMARCD2-212ENST00000613943 NUCB1Q02818 461 aa24.94■■□□□ 1.58
SMARCD2-212ENST00000613943 MTHFSDQ2M296 383 aaKnown RBP24.94■■□□□ 1.58
SMARCD2-212ENST00000613943 UPF2Q9HAU5 1272 aaKnown RBP24.94■■□□□ 1.58
SMARCD2-212ENST00000613943 NALCNQ8IZF0 1738 aa24.94■■□□□ 1.58
SMARCD2-212ENST00000613943 TTC21AQ8NDW8 1320 aa24.93■■□□□ 1.58
SMARCD2-212ENST00000613943 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
SMARCD2-212ENST00000613943 CHL1O00533 1208 aa24.92■■□□□ 1.58
SMARCD2-212ENST00000613943 EYA1Q99502 592 aa24.92■■□□□ 1.58
SMARCD2-212ENST00000613943 PIK3R4Q99570 1358 aa24.92■■□□□ 1.58
SMARCD2-212ENST00000613943 ANKRD45Q5TZF3 282 aa24.92■■□□□ 1.58
SMARCD2-212ENST00000613943 CHD1LQ86WJ1 897 aa24.92■■□□□ 1.58
SMARCD2-212ENST00000613943 C14orf37Q86TY3 774 aa24.91■■□□□ 1.58
SMARCD2-212ENST00000613943 SLKQ9H2G2 1235 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-212ENST00000613943 FLT4P35916 1363 aa24.9■■□□□ 1.58
SMARCD2-212ENST00000613943 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-212ENST00000613943 SBNO1A3KN83 1393 aa24.89■■□□□ 1.58
SMARCD2-212ENST00000613943 CEP170BQ9Y4F5 1589 aaPredicted RBP24.89■■□□□ 1.57
SMARCD2-212ENST00000613943 RGPD1P0DJD0 1748 aa24.88■■□□□ 1.57
SMARCD2-212ENST00000613943 API5Q9BZZ5 524 aaKnown RBP24.88■■□□□ 1.57
SMARCD2-212ENST00000613943 USP35Q9P2H5 1018 aa24.88■■□□□ 1.57
SMARCD2-212ENST00000613943 PIK3C2AO00443 1686 aa24.88■■□□□ 1.57
SMARCD2-212ENST00000613943 ABTB2Q8N961 1025 aa24.87■■□□□ 1.57
SMARCD2-212ENST00000613943 ARHGEF10O15013 1369 aa24.87■■□□□ 1.57
SMARCD2-212ENST00000613943 FRAT2O75474 233 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms