RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
PCDHGA4-202ENST00000612927 FCHSD2O94868 740 aa16.1■□□□□ 0.17
PCDHGA4-202ENST00000612927 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
PCDHGA4-202ENST00000612927 RIPK4P57078 832 aa16.1■□□□□ 0.17
PCDHGA4-202ENST00000612927 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
PCDHGA4-202ENST00000612927 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
PCDHGA4-202ENST00000612927 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
PCDHGA4-202ENST00000612927 IL13P35225 146 aa16.09■□□□□ 0.17
PCDHGA4-202ENST00000612927 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
PCDHGA4-202ENST00000612927 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
PCDHGA4-202ENST00000612927 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
PCDHGA4-202ENST00000612927 HMOX1P09601 288 aa16.09■□□□□ 0.17
PCDHGA4-202ENST00000612927 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
PCDHGA4-202ENST00000612927 USP6P35125 1406 aa16.08■□□□□ 0.16
PCDHGA4-202ENST00000612927 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.16
PCDHGA4-202ENST00000612927 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.16
PCDHGA4-202ENST00000612927 IL16Q14005 1332 aa16.07■□□□□ 0.16
PCDHGA4-202ENST00000612927 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
PCDHGA4-202ENST00000612927 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
PCDHGA4-202ENST00000612927 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
PCDHGA4-202ENST00000612927 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
PCDHGA4-202ENST00000612927 GLIPR1L2Q4G1C9 344 aa16.05■□□□□ 0.16
PCDHGA4-202ENST00000612927 L1TD1Q5T7N2 865 aaKnown RBP16.05■□□□□ 0.16
PCDHGA4-202ENST00000612927 SMC4Q9NTJ3 1288 aa16.04■□□□□ 0.16
PCDHGA4-202ENST00000612927 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
PCDHGA4-202ENST00000612927 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
PCDHGA4-202ENST00000612927 NFE2L2Q16236 605 aa16.03■□□□□ 0.16
PCDHGA4-202ENST00000612927 CT47B1P0C2W7 299 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA4-202ENST00000612927 KCNA6P17658 529 aa16.03■□□□□ 0.16
PCDHGA4-202ENST00000612927 ZKSCAN2Q63HK3 967 aa16.02■□□□□ 0.16
PCDHGA4-202ENST00000612927 SSH1Q8WYL5 1049 aa16.02■□□□□ 0.16
PCDHGA4-202ENST00000612927 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
PCDHGA4-202ENST00000612927 NALCNQ8IZF0 1738 aa16.02■□□□□ 0.15
PCDHGA4-202ENST00000612927 RGPD8O14715 1765 aaPredicted RBP16.02■□□□□ 0.15
PCDHGA4-202ENST00000612927 MVPQ14764 893 aaKnown RBP16.01■□□□□ 0.15
PCDHGA4-202ENST00000612927 PEAK1Q9H792 1746 aa16■□□□□ 0.15
PCDHGA4-202ENST00000612927 TRIM27P14373 513 aa16■□□□□ 0.15
PCDHGA4-202ENST00000612927 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
PCDHGA4-202ENST00000612927 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
PCDHGA4-202ENST00000612927 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
PCDHGA4-202ENST00000612927 EIF4A2Q14240 407 aaKnown RBP15.99■□□□□ 0.15
PCDHGA4-202ENST00000612927 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
PCDHGA4-202ENST00000612927 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
PCDHGA4-202ENST00000612927 ZNF142P52746 1687 aaPredicted RBP15.98■□□□□ 0.15
PCDHGA4-202ENST00000612927 NGDNQ8NEJ9 315 aaKnown RBP15.98■□□□□ 0.15
PCDHGA4-202ENST00000612927 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
PCDHGA4-202ENST00000612927 SOX12O15370 315 aa15.98■□□□□ 0.15
PCDHGA4-202ENST00000612927 RRAGDQ9NQL2 400 aaPredicted RBP15.98■□□□□ 0.15
PCDHGA4-202ENST00000612927 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
PCDHGA4-202ENST00000612927 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
PCDHGA4-202ENST00000612927 BECN1Q14457 450 aa15.97■□□□□ 0.15
PCDHGA4-202ENST00000612927 PDZRN3Q9UPQ7 1066 aa15.97■□□□□ 0.15
PCDHGA4-202ENST00000612927 AAMPQ13685 434 aa15.96■□□□□ 0.15
PCDHGA4-202ENST00000612927 ANKARQ7Z5J8 1434 aa15.96■□□□□ 0.15
PCDHGA4-202ENST00000612927 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
PCDHGA4-202ENST00000612927 FMN2Q9NZ56 1722 aa15.96■□□□□ 0.15
PCDHGA4-202ENST00000612927 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
PCDHGA4-202ENST00000612927 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
PCDHGA4-202ENST00000612927 SEC24BO95487 1268 aa15.95■□□□□ 0.14
PCDHGA4-202ENST00000612927 ATF7IPQ6VMQ6 1270 aa15.95■□□□□ 0.14
PCDHGA4-202ENST00000612927 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
PCDHGA4-202ENST00000612927 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
PCDHGA4-202ENST00000612927 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
PCDHGA4-202ENST00000612927 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
PCDHGA4-202ENST00000612927 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
PCDHGA4-202ENST00000612927 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 CHD2O14647 1828 aaKnown RBP15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 CALD1Q05682 793 aaKnown RBP15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 USP19O94966 1318 aa15.93■□□□□ 0.14
PCDHGA4-202ENST00000612927 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
PCDHGA4-202ENST00000612927 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
PCDHGA4-202ENST00000612927 RBM33Q96EV2 1170 aaKnown RBP15.92■□□□□ 0.14
PCDHGA4-202ENST00000612927 GNAI1P63096 354 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 DCTN1Q14203 1278 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 ALDH1L2Q3SY69 923 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 KIF16BQ96L93 1317 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 DDX19BQ9UMR2 479 aa15.91■□□□□ 0.14
PCDHGA4-202ENST00000612927 CLCN1P35523 988 aa15.9■□□□□ 0.14
PCDHGA4-202ENST00000612927 SBNO1A3KN83 1393 aa15.9■□□□□ 0.14
PCDHGA4-202ENST00000612927 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
PCDHGA4-202ENST00000612927 RRP9O43818 475 aaKnown RBP15.9■□□□□ 0.14
PCDHGA4-202ENST00000612927 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
PCDHGA4-202ENST00000612927 VAMP4O75379 141 aa15.89■□□□□ 0.13
PCDHGA4-202ENST00000612927 FLT4P35916 1363 aa15.89■□□□□ 0.13
PCDHGA4-202ENST00000612927 NLRP6P59044 892 aa15.89■□□□□ 0.13
PCDHGA4-202ENST00000612927 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
PCDHGA4-202ENST00000612927 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
PCDHGA4-202ENST00000612927 ANTXR1Q9H6X2 564 aa15.88■□□□□ 0.13
PCDHGA4-202ENST00000612927 ARHGEF10O15013 1369 aa15.88■□□□□ 0.13
PCDHGA4-202ENST00000612927 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
PCDHGA4-202ENST00000612927 FSD2A1L4K1 749 aa15.87■□□□□ 0.13
PCDHGA4-202ENST00000612927 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
PCDHGA4-202ENST00000612927 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
PCDHGA4-202ENST00000612927 NPHP4O75161 1426 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA4-202ENST00000612927 AMPHP49418 695 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms