RNA–Protein interactions for RNA: ENST00000610417.4

SAMD4B-213, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SAMD4B, Length 3,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-213ENST00000610417 RNF17Q9BXT8 1623 aaKnown RBP13.58□□□□□ -0.24
SAMD4B-213ENST00000610417 DEPDC5O75140 1603 aa13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 PDE3AQ14432 1141 aa13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 RIMS1Q86UR5 1692 aaKnown RBP13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 WDR63Q8IWG1 891 aa13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 POLR1AO95602 1720 aaPredicted RBP13.57□□□□□ -0.24
SAMD4B-213ENST00000610417 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
SAMD4B-213ENST00000610417 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
SAMD4B-213ENST00000610417 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
SAMD4B-213ENST00000610417 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
SAMD4B-213ENST00000610417 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
SAMD4B-213ENST00000610417 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
SAMD4B-213ENST00000610417 F6X3S4 739 aa13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 CFAP44Q96MT7 982 aa13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 PRDM16Q9HAZ2 1276 aa13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 TET3O43151 1660 aa13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 LTKP29376 864 aa13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 METP08581 1390 aa13.54□□□□□ -0.24
SAMD4B-213ENST00000610417 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 BECN1Q14457 450 aa13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 AMOTL2Q9Y2J4 779 aa13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 ACEP12821 1306 aa13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 NCLP19338 710 aaKnown RBP13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 FOXD4L5Q5VV16 416 aaPredicted RBP13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 FOXD4L4Q8WXT5 416 aaPredicted RBP13.53□□□□□ -0.24
SAMD4B-213ENST00000610417 KIF1BO60333 1816 aa13.52□□□□□ -0.24
SAMD4B-213ENST00000610417 A0A0G2JS52 829 aa13.52□□□□□ -0.24
SAMD4B-213ENST00000610417 DDX19BQ9UMR2 479 aa13.52□□□□□ -0.24
SAMD4B-213ENST00000610417 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.24
SAMD4B-213ENST00000610417 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
SAMD4B-213ENST00000610417 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
SAMD4B-213ENST00000610417 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.25
SAMD4B-213ENST00000610417 C3P01024 1663 aa13.52□□□□□ -0.25
SAMD4B-213ENST00000610417 ABCC3O15438 1527 aa13.52□□□□□ -0.25
SAMD4B-213ENST00000610417 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
SAMD4B-213ENST00000610417 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
SAMD4B-213ENST00000610417 ABTB2Q8N961 1025 aa13.51□□□□□ -0.25
SAMD4B-213ENST00000610417 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
SAMD4B-213ENST00000610417 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
SAMD4B-213ENST00000610417 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
SAMD4B-213ENST00000610417 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
SAMD4B-213ENST00000610417 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 VWDEQ8N2E2 1590 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 CC2D2BQ6DHV5 1058 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 FCHSD2O94868 740 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 CLSTN1O94985 981 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
SAMD4B-213ENST00000610417 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 ZNF830Q96NB3 372 aaPredicted RBP13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 SYNMO15061 1565 aa13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 PTPRMP28827 1452 aa13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
SAMD4B-213ENST00000610417 ANXA1P04083 346 aa13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 INSRP06213 1382 aa13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 GNAI1P63096 354 aa13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
SAMD4B-213ENST00000610417 EIF4A2Q14240 407 aaKnown RBP13.47□□□□□ -0.25
SAMD4B-213ENST00000610417 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
SAMD4B-213ENST00000610417 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
SAMD4B-213ENST00000610417 TMEM51Q9NW97 253 aa13.47□□□□□ -0.25
SAMD4B-213ENST00000610417 RRP9O43818 475 aaKnown RBP13.46□□□□□ -0.25
SAMD4B-213ENST00000610417 MYOM2P54296 1465 aa13.46□□□□□ -0.25
SAMD4B-213ENST00000610417 PRR36Q9H6K5 1346 aa13.46□□□□□ -0.25
SAMD4B-213ENST00000610417 FKBP5Q13451 457 aaPredicted RBP13.46□□□□□ -0.26
SAMD4B-213ENST00000610417 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
SAMD4B-213ENST00000610417 PSEN1P49768 467 aa13.45□□□□□ -0.26
SAMD4B-213ENST00000610417 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
SAMD4B-213ENST00000610417 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
SAMD4B-213ENST00000610417 DTNBO60941 627 aa13.44□□□□□ -0.26
SAMD4B-213ENST00000610417 PSME1Q06323 249 aa13.44□□□□□ -0.26
SAMD4B-213ENST00000610417 TULP4Q9NRJ4 1543 aa13.44□□□□□ -0.26
SAMD4B-213ENST00000610417 VAMP4O75379 141 aa13.44□□□□□ -0.26
SAMD4B-213ENST00000610417 HSCBQ8IWL3 235 aa13.44□□□□□ -0.26
SAMD4B-213ENST00000610417 ABCC11Q96J66 1382 aa13.43□□□□□ -0.26
SAMD4B-213ENST00000610417 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
SAMD4B-213ENST00000610417 KCNA6P17658 529 aa13.43□□□□□ -0.26
SAMD4B-213ENST00000610417 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
SAMD4B-213ENST00000610417 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
SAMD4B-213ENST00000610417 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
SAMD4B-213ENST00000610417 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms