RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 RRP7AQ9Y3A4 280 aaKnown RBP6.58□□□□□ -1.36
SCARNA15-201ENST00000607520 NSD2O96028 1365 aa6.58□□□□□ -1.36
SCARNA15-201ENST00000607520 KIF1BO60333 1816 aa6.58□□□□□ -1.36
SCARNA15-201ENST00000607520 CEP152O94986 1710 aa6.58□□□□□ -1.36
SCARNA15-201ENST00000607520 RNF17Q9BXT8 1623 aaKnown RBP6.58□□□□□ -1.36
SCARNA15-201ENST00000607520 SYNMO15061 1565 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 SPATA31D1Q6ZQQ2 1576 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 GJD4Q96KN9 370 aaPredicted RBP6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 TEX13AQ9BXU3 409 aaPredicted RBP6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 DAXXQ9UER7 740 aaPredicted RBP6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 IQGAP3Q86VI3 1631 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 ANKARQ7Z5J8 1434 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 FYB1O15117 783 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 IRX6P78412 446 aaPredicted RBP6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 RUNDC1Q96C34 613 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 ZNF652Q9Y2D9 606 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 SPATA31E1Q6ZUB1 1445 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 GNAI1P63096 354 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 KIAA0232Q92628 1395 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 GNAT3A8MTJ3 354 aa6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 FRAT1Q92837 279 aaPredicted RBP6.57□□□□□ -1.36
SCARNA15-201ENST00000607520 GCC2Q8IWJ2 1684 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 FLT4P35916 1363 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 FRMPD1Q5SYB0 1578 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 RFC4P35249 363 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 MYOM2P54296 1465 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 FCHSD2O94868 740 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 HSP90AB2PQ58FF8 381 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 C1orf167Q5SNV9 1468 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 FRAT2O75474 233 aaPredicted RBP6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 PPP2R1AP30153 589 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 THRAP3Q9Y2W1 955 aaKnown RBP6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 UNC13BO14795 1591 aa6.56□□□□□ -1.36
SCARNA15-201ENST00000607520 RALGAPBQ86X10 1494 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 BTBD11A6QL63 1104 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 ELL2O00472 640 aaPredicted RBP6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 LARP1Q6PKG0 1096 aaKnown RBP6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 PCDH11XQ9BZA7 1347 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 PCDH11YQ9BZA8 1340 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 SBNO1A3KN83 1393 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 EDC4Q6P2E9 1401 aaKnown RBP6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 A0A087WZG4 1122 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 FAM177BA6PVY3 158 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 TRIM37O94972 964 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 HOXC9P31274 260 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 RIC3Q7Z5B4 369 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 CARD10Q9BWT7 1032 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 MAP3K19Q56UN5 1328 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 PIK3C2BO00750 1634 aa6.55□□□□□ -1.36
SCARNA15-201ENST00000607520 SLC4A10Q6U841 1118 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 CCNL1Q9UK58 526 aaPredicted RBP6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 PTCH1Q13635 1447 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 APAF1O14727 1248 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 ATP6V1AP38606 617 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 AIMP1Q12904 312 aaKnown RBP6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 NECTIN2Q92692 538 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 PRKRIP1Q9H875 184 aaPredicted RBP6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 DCCP43146 1447 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 PREX1Q8TCU6 1659 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 PPRC1Q5VV67 1664 aaKnown RBP6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 ADAMTS13Q76LX8 1427 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 PHF14O94880 888 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 GORABQ5T7V8 394 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 FLAD1Q8NFF5 587 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 FMNL2Q96PY5 1086 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 TNS3Q68CZ2 1445 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 KCNJ4P48050 445 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 BICDL1Q6ZP65 573 aa6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
SCARNA15-201ENST00000607520 LRRIQ1Q96JM4 1722 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 CROCC2H7BZ55 1655 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 VPS72Q15906 364 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 ALKQ9UM73 1620 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 FAM83GA6ND36 823 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 CCDC136Q96JN2 1154 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 A0A1W2PP64 1363 aa6.53□□□□□ -1.36
SCARNA15-201ENST00000607520 SOS2Q07890 1332 aaPredicted RBP6.52□□□□□ -1.36
SCARNA15-201ENST00000607520 WDR17Q8IZU2 1322 aa6.52□□□□□ -1.36
SCARNA15-201ENST00000607520 PRIM1P49642 420 aaKnown RBP6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 ARHGEF25Q86VW2 580 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 SMC4Q9NTJ3 1288 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 C9orf78Q9NZ63 289 aaPredicted RBP6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 POLR3AO14802 1390 aaPredicted RBP6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 PRR36Q9H6K5 1346 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 ADAMTSL3P82987 1691 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 SLIT1O75093 1534 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 CCDC30Q5VVM6 783 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 PARP3Q9Y6F1 533 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 C3P01024 1663 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 TAF7Q15545 349 aaPredicted RBP6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 RTL5Q5HYW3 569 aaPredicted RBP6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 TESK2Q96S53 571 aa6.52□□□□□ -1.37
SCARNA15-201ENST00000607520 ARHGAP23Q9P227 1491 aa6.51□□□□□ -1.37
SCARNA15-201ENST00000607520 DIP2AQ14689 1571 aa6.51□□□□□ -1.37
SCARNA15-201ENST00000607520 FBLN1P23142 703 aa6.51□□□□□ -1.37
SCARNA15-201ENST00000607520 FKBP5Q13451 457 aaPredicted RBP6.51□□□□□ -1.37
SCARNA15-201ENST00000607520 AKAP4Q5JQC9 854 aa6.51□□□□□ -1.37
SCARNA15-201ENST00000607520 HDGFL1Q5TGJ6 251 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms