RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 TMEM57Q8N5G2 664 aa20.35■□□□□ 0.85
CTSA-214ENST00000606788 FOXO3O43524 673 aa20.34■□□□□ 0.85
CTSA-214ENST00000606788 C1orf115Q9H7X2 142 aa20.34■□□□□ 0.85
CTSA-214ENST00000606788 MED14O60244 1454 aa20.34■□□□□ 0.85
CTSA-214ENST00000606788 MVPQ14764 893 aaKnown RBP20.33■□□□□ 0.85
CTSA-214ENST00000606788 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
CTSA-214ENST00000606788 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
CTSA-214ENST00000606788 TECPR2O15040 1411 aa20.32■□□□□ 0.84
CTSA-214ENST00000606788 AMPHP49418 695 aa20.32■□□□□ 0.84
CTSA-214ENST00000606788 C3P01024 1663 aa20.31■□□□□ 0.84
CTSA-214ENST00000606788 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
CTSA-214ENST00000606788 C8orf34Q49A92 452 aa20.31■□□□□ 0.84
CTSA-214ENST00000606788 LMOD2Q6P5Q4 547 aa20.31■□□□□ 0.84
CTSA-214ENST00000606788 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
CTSA-214ENST00000606788 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
CTSA-214ENST00000606788 ADGRB2O60241 1585 aa20.3■□□□□ 0.84
CTSA-214ENST00000606788 MAP3K19Q56UN5 1328 aa20.3■□□□□ 0.84
CTSA-214ENST00000606788 CDC42BPGQ6DT37 1551 aa20.3■□□□□ 0.84
CTSA-214ENST00000606788 PDZRN3Q9UPQ7 1066 aa20.3■□□□□ 0.84
CTSA-214ENST00000606788 ANKRD26Q9UPS8 1709 aa20.29■□□□□ 0.84
CTSA-214ENST00000606788 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
CTSA-214ENST00000606788 FAM161AQ3B820 660 aa20.29■□□□□ 0.84
CTSA-214ENST00000606788 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
CTSA-214ENST00000606788 ABTB2Q8N961 1025 aa20.28■□□□□ 0.84
CTSA-214ENST00000606788 SEC24BO95487 1268 aa20.28■□□□□ 0.84
CTSA-214ENST00000606788 USP6P35125 1406 aa20.27■□□□□ 0.84
CTSA-214ENST00000606788 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
CTSA-214ENST00000606788 TWISTNBQ3B726 338 aaPredicted RBP20.26■□□□□ 0.83
CTSA-214ENST00000606788 VAMP4O75379 141 aa20.25■□□□□ 0.83
CTSA-214ENST00000606788 ESCO1Q5FWF5 840 aa20.24■□□□□ 0.83
CTSA-214ENST00000606788 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
CTSA-214ENST00000606788 GNAI1P63096 354 aa20.24■□□□□ 0.83
CTSA-214ENST00000606788 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
CTSA-214ENST00000606788 RWDD1Q9H446 243 aaPredicted RBP20.23■□□□□ 0.83
CTSA-214ENST00000606788 IL16Q14005 1332 aa20.23■□□□□ 0.83
CTSA-214ENST00000606788 AATKQ6ZMQ8 1374 aa20.23■□□□□ 0.83
CTSA-214ENST00000606788 CDK12Q9NYV4 1490 aaPredicted RBP20.22■□□□□ 0.83
CTSA-214ENST00000606788 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
CTSA-214ENST00000606788 EYA1Q99502 592 aa20.21■□□□□ 0.83
CTSA-214ENST00000606788 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
CTSA-214ENST00000606788 ITSN1Q15811 1721 aa20.2■□□□□ 0.82
CTSA-214ENST00000606788 IPO8O15397 1037 aaKnown RBP20.2■□□□□ 0.82
CTSA-214ENST00000606788 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
CTSA-214ENST00000606788 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
CTSA-214ENST00000606788 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
CTSA-214ENST00000606788 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
CTSA-214ENST00000606788 KIF16BQ96L93 1317 aa20.18■□□□□ 0.82
CTSA-214ENST00000606788 MRPL50Q8N5N7 158 aaKnown RBP20.18■□□□□ 0.82
CTSA-214ENST00000606788 LNPKQ9C0E8 428 aa20.18■□□□□ 0.82
CTSA-214ENST00000606788 OVOS2A0A0J9YW53 1432 aa20.18■□□□□ 0.82
CTSA-214ENST00000606788 OVOS2Q6IE36 1432 aa20.18■□□□□ 0.82
CTSA-214ENST00000606788 CT47B1P0C2W7 299 aaPredicted RBP20.18■□□□□ 0.82
CTSA-214ENST00000606788 ORAI2Q96SN7 254 aa20.18■□□□□ 0.82
CTSA-214ENST00000606788 KNDC1Q76NI1 1749 aa20.17■□□□□ 0.82
CTSA-214ENST00000606788 MON2Q7Z3U7 1717 aa20.17■□□□□ 0.82
CTSA-214ENST00000606788 PSME1Q06323 249 aa20.17■□□□□ 0.82
CTSA-214ENST00000606788 DAXXQ9UER7 740 aaPredicted RBP20.17■□□□□ 0.82
CTSA-214ENST00000606788 PHF8Q9UPP1 1060 aa20.17■□□□□ 0.82
CTSA-214ENST00000606788 ARHGAP23Q9P227 1491 aa20.16■□□□□ 0.82
CTSA-214ENST00000606788 APBB1O00213 710 aa20.16■□□□□ 0.82
CTSA-214ENST00000606788 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
CTSA-214ENST00000606788 RIMS1Q86UR5 1692 aaKnown RBP20.16■□□□□ 0.82
CTSA-214ENST00000606788 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
CTSA-214ENST00000606788 DIP2AQ14689 1571 aa20.15■□□□□ 0.82
CTSA-214ENST00000606788 RTF1Q92541 710 aaKnown RBP20.15■□□□□ 0.82
CTSA-214ENST00000606788 SLIT1O75093 1534 aa20.15■□□□□ 0.82
CTSA-214ENST00000606788 ZNF853P0CG23 659 aa20.15■□□□□ 0.82
CTSA-214ENST00000606788 ZBTB40Q9NUA8 1239 aa20.15■□□□□ 0.82
CTSA-214ENST00000606788 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.82
CTSA-214ENST00000606788 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
CTSA-214ENST00000606788 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
CTSA-214ENST00000606788 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
CTSA-214ENST00000606788 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
CTSA-214ENST00000606788 SLC4A10Q6U841 1118 aa20.12■□□□□ 0.81
CTSA-214ENST00000606788 HOXC9P31274 260 aa20.11■□□□□ 0.81
CTSA-214ENST00000606788 TTC21AQ8NDW8 1320 aa20.11■□□□□ 0.81
CTSA-214ENST00000606788 PEAK1Q9H792 1746 aa20.11■□□□□ 0.81
CTSA-214ENST00000606788 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
CTSA-214ENST00000606788 CEP170BQ9Y4F5 1589 aaPredicted RBP20.1■□□□□ 0.81
CTSA-214ENST00000606788 F6X3S4 739 aa20.1■□□□□ 0.81
CTSA-214ENST00000606788 ANKRD45Q5TZF3 282 aa20.1■□□□□ 0.81
CTSA-214ENST00000606788 FLT4P35916 1363 aa20.1■□□□□ 0.81
CTSA-214ENST00000606788 DLG5Q8TDM6 1919 aa20.09■□□□□ 0.81
CTSA-214ENST00000606788 PTCH1Q13635 1447 aa20.09■□□□□ 0.81
CTSA-214ENST00000606788 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
CTSA-214ENST00000606788 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
CTSA-214ENST00000606788 SLC4A2P04920 1241 aa20.08■□□□□ 0.81
CTSA-214ENST00000606788 ZBTB7BO15156 539 aaPredicted RBP20.08■□□□□ 0.81
CTSA-214ENST00000606788 MFAP1P55081 439 aaKnown RBP20.08■□□□□ 0.81
CTSA-214ENST00000606788 G2E3Q7L622 706 aa20.08■□□□□ 0.81
CTSA-214ENST00000606788 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
CTSA-214ENST00000606788 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
CTSA-214ENST00000606788 SBNO1A3KN83 1393 aa20.07■□□□□ 0.8
CTSA-214ENST00000606788 HSPA2P54652 639 aa20.06■□□□□ 0.8
CTSA-214ENST00000606788 CHL1O00533 1208 aa20.06■□□□□ 0.8
CTSA-214ENST00000606788 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
CTSA-214ENST00000606788 USP19O94966 1318 aa20.04■□□□□ 0.8
CTSA-214ENST00000606788 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
CTSA-214ENST00000606788 SIRT2Q8IXJ6 389 aa20.04■□□□□ 0.8
CTSA-214ENST00000606788 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms