RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 NEFMP07197 916 aa13.1□□□□□ -0.31
FOCAD-214ENST00000604828 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
FOCAD-214ENST00000604828 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
FOCAD-214ENST00000604828 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
FOCAD-214ENST00000604828 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
FOCAD-214ENST00000604828 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
FOCAD-214ENST00000604828 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
FOCAD-214ENST00000604828 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
FOCAD-214ENST00000604828 FYB1O15117 783 aa13.08□□□□□ -0.32
FOCAD-214ENST00000604828 RLBP1P12271 317 aa13.07□□□□□ -0.32
FOCAD-214ENST00000604828 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
FOCAD-214ENST00000604828 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
FOCAD-214ENST00000604828 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
FOCAD-214ENST00000604828 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
FOCAD-214ENST00000604828 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
FOCAD-214ENST00000604828 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
FOCAD-214ENST00000604828 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
FOCAD-214ENST00000604828 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
FOCAD-214ENST00000604828 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
FOCAD-214ENST00000604828 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
FOCAD-214ENST00000604828 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
FOCAD-214ENST00000604828 USP19O94966 1318 aa13.06□□□□□ -0.32
FOCAD-214ENST00000604828 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
FOCAD-214ENST00000604828 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
FOCAD-214ENST00000604828 NHSL1Q5SYE7 1610 aa13.05□□□□□ -0.32
FOCAD-214ENST00000604828 FOXO3O43524 673 aa13.05□□□□□ -0.32
FOCAD-214ENST00000604828 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
FOCAD-214ENST00000604828 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
FOCAD-214ENST00000604828 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
FOCAD-214ENST00000604828 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
FOCAD-214ENST00000604828 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
FOCAD-214ENST00000604828 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
FOCAD-214ENST00000604828 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
FOCAD-214ENST00000604828 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.32
FOCAD-214ENST00000604828 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.32
FOCAD-214ENST00000604828 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.32
FOCAD-214ENST00000604828 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.32
FOCAD-214ENST00000604828 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.32
FOCAD-214ENST00000604828 FCHSD2O94868 740 aa13.01□□□□□ -0.33
FOCAD-214ENST00000604828 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
FOCAD-214ENST00000604828 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
FOCAD-214ENST00000604828 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
FOCAD-214ENST00000604828 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
FOCAD-214ENST00000604828 KIF16BQ96L93 1317 aa13.01□□□□□ -0.33
FOCAD-214ENST00000604828 CPSF1Q10570 1443 aaKnown RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
FOCAD-214ENST00000604828 PXDNQ92626 1479 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 ALDH1L2Q3SY69 923 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 ZNF428Q96B54 188 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 CABP1Q9NZU7 370 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 MON2Q7Z3U7 1717 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 SLC4A3P48751 1232 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
FOCAD-214ENST00000604828 RIPK4P57078 832 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
FOCAD-214ENST00000604828 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
FOCAD-214ENST00000604828 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
FOCAD-214ENST00000604828 JCADQ9P266 1359 aa12.99□□□□□ -0.33
FOCAD-214ENST00000604828 TRIM27P14373 513 aa12.99□□□□□ -0.33
FOCAD-214ENST00000604828 BECN1Q14457 450 aa12.99□□□□□ -0.33
FOCAD-214ENST00000604828 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
FOCAD-214ENST00000604828 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
FOCAD-214ENST00000604828 UPF2Q9HAU5 1272 aaKnown RBP12.98□□□□□ -0.33
FOCAD-214ENST00000604828 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
FOCAD-214ENST00000604828 IPO8O15397 1037 aaKnown RBP12.98□□□□□ -0.33
FOCAD-214ENST00000604828 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
FOCAD-214ENST00000604828 SEC24BO95487 1268 aa12.97□□□□□ -0.33
FOCAD-214ENST00000604828 TBC1D32Q96NH3 1257 aa12.97□□□□□ -0.33
FOCAD-214ENST00000604828 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
FOCAD-214ENST00000604828 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
FOCAD-214ENST00000604828 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
FOCAD-214ENST00000604828 KRT28Q7Z3Y7 464 aa12.96□□□□□ -0.33
FOCAD-214ENST00000604828 PSME1Q06323 249 aa12.96□□□□□ -0.34
FOCAD-214ENST00000604828 SMC5Q8IY18 1101 aa12.96□□□□□ -0.34
FOCAD-214ENST00000604828 NGDNQ8NEJ9 315 aaKnown RBP12.96□□□□□ -0.34
FOCAD-214ENST00000604828 NRKQ7Z2Y5 1582 aa12.96□□□□□ -0.34
FOCAD-214ENST00000604828 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
FOCAD-214ENST00000604828 GSE1Q14687 1217 aa12.95□□□□□ -0.34
FOCAD-214ENST00000604828 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
FOCAD-214ENST00000604828 NOB1Q9ULX3 412 aaKnown RBP12.95□□□□□ -0.34
FOCAD-214ENST00000604828 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
FOCAD-214ENST00000604828 ACEP12821 1306 aa12.95□□□□□ -0.34
FOCAD-214ENST00000604828 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
FOCAD-214ENST00000604828 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
FOCAD-214ENST00000604828 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
FOCAD-214ENST00000604828 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
FOCAD-214ENST00000604828 LRP6O75581 1613 aa12.94□□□□□ -0.34
FOCAD-214ENST00000604828 ITPRIPQ8IWB1 547 aa12.94□□□□□ -0.34
FOCAD-214ENST00000604828 SPATA31A3Q5VYP0 1347 aa12.93□□□□□ -0.34
FOCAD-214ENST00000604828 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
FOCAD-214ENST00000604828 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
FOCAD-214ENST00000604828 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
FOCAD-214ENST00000604828 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
FOCAD-214ENST00000604828 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms