RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 AMPHP49418 695 aa14.6□□□□□ -0.07
ARHGEF1-220ENST00000600274 TWISTNBQ3B726 338 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF1-220ENST00000600274 C8orf58Q8NAV2 365 aa14.59□□□□□ -0.07
ARHGEF1-220ENST00000600274 ANKRD45Q5TZF3 282 aa14.58□□□□□ -0.08
ARHGEF1-220ENST00000600274 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
ARHGEF1-220ENST00000600274 GNAI1P63096 354 aa14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 TTC21BQ7Z4L5 1316 aa14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 FOXO3O43524 673 aa14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 NLRP6P59044 892 aa14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 BRPF3Q9ULD4 1205 aa14.57□□□□□ -0.08
ARHGEF1-220ENST00000600274 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF1-220ENST00000600274 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
ARHGEF1-220ENST00000600274 NLRP1Q9C000 1473 aa14.54□□□□□ -0.08
ARHGEF1-220ENST00000600274 VAMP4O75379 141 aa14.54□□□□□ -0.08
ARHGEF1-220ENST00000600274 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
ARHGEF1-220ENST00000600274 EDC4Q6P2E9 1401 aaKnown RBP14.54□□□□□ -0.08
ARHGEF1-220ENST00000600274 NFKBIBQ15653 356 aa14.54□□□□□ -0.08
ARHGEF1-220ENST00000600274 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF1-220ENST00000600274 RTF1Q92541 710 aaKnown RBP14.53□□□□□ -0.08
ARHGEF1-220ENST00000600274 USHBP1Q8N6Y0 703 aa14.53□□□□□ -0.08
ARHGEF1-220ENST00000600274 CT47B1P0C2W7 299 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF1-220ENST00000600274 CPS1P31327 1500 aa14.52□□□□□ -0.08
ARHGEF1-220ENST00000600274 FRAT2O75474 233 aaPredicted RBP14.52□□□□□ -0.08
ARHGEF1-220ENST00000600274 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.08
ARHGEF1-220ENST00000600274 LRRC7Q96NW7 1537 aa14.52□□□□□ -0.09
ARHGEF1-220ENST00000600274 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF1-220ENST00000600274 IL16Q14005 1332 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 KCNA6P17658 529 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 PNPLA6Q8IY17 1366 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 BECN1Q14457 450 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 IFT57Q9NWB7 429 aa14.51□□□□□ -0.09
ARHGEF1-220ENST00000600274 MRPL50Q8N5N7 158 aaKnown RBP14.5□□□□□ -0.09
ARHGEF1-220ENST00000600274 THEMISQ8N1K5 641 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF1-220ENST00000600274 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
ARHGEF1-220ENST00000600274 CFAP44Q96MT7 982 aa14.5□□□□□ -0.09
ARHGEF1-220ENST00000600274 ATP7BP35670 1465 aa14.49□□□□□ -0.09
ARHGEF1-220ENST00000600274 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
ARHGEF1-220ENST00000600274 SPATA31D1Q6ZQQ2 1576 aa14.49□□□□□ -0.09
ARHGEF1-220ENST00000600274 AGLP35573 1532 aa14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 FAM135BQ49AJ0 1406 aa14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 ALDH1L2Q3SY69 923 aa14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 F6X3S4 739 aa14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 CPSF1Q10570 1443 aaKnown RBP14.48□□□□□ -0.09
ARHGEF1-220ENST00000600274 USP19O94966 1318 aa14.47□□□□□ -0.09
ARHGEF1-220ENST00000600274 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
ARHGEF1-220ENST00000600274 ZNF428Q96B54 188 aa14.47□□□□□ -0.09
ARHGEF1-220ENST00000600274 CHD1LQ86WJ1 897 aa14.46□□□□□ -0.09
ARHGEF1-220ENST00000600274 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.09
ARHGEF1-220ENST00000600274 AAMPQ13685 434 aa14.46□□□□□ -0.09
ARHGEF1-220ENST00000600274 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
ARHGEF1-220ENST00000600274 MAP2P11137 1827 aaKnown RBP14.45□□□□□ -0.1
ARHGEF1-220ENST00000600274 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
ARHGEF1-220ENST00000600274 ADAMTS13Q76LX8 1427 aa14.45□□□□□ -0.1
ARHGEF1-220ENST00000600274 ZBTB7BO15156 539 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-220ENST00000600274 HDAC1Q13547 482 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF1-220ENST00000600274 API5Q9BZZ5 524 aaKnown RBP14.44□□□□□ -0.1
ARHGEF1-220ENST00000600274 EYA1Q99502 592 aa14.44□□□□□ -0.1
ARHGEF1-220ENST00000600274 HSP90AA1P07900 732 aaKnown RBP14.44□□□□□ -0.1
ARHGEF1-220ENST00000600274 GSE1Q14687 1217 aa14.44□□□□□ -0.1
ARHGEF1-220ENST00000600274 MED14O60244 1454 aa14.44□□□□□ -0.1
ARHGEF1-220ENST00000600274 SMARCA5O60264 1052 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF1-220ENST00000600274 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
ARHGEF1-220ENST00000600274 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF1-220ENST00000600274 ADGRB2O60241 1585 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 PLEKHG3A1L390 1219 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 PSME1Q06323 249 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 SMC5Q8IY18 1101 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 TBC1D2Q9BYX2 928 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 G2E3Q7L622 706 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 TBC1D32Q96NH3 1257 aa14.42□□□□□ -0.1
ARHGEF1-220ENST00000600274 PLEKHG1Q9ULL1 1385 aa14.41□□□□□ -0.1
ARHGEF1-220ENST00000600274 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
ARHGEF1-220ENST00000600274 ZNF853P0CG23 659 aa14.41□□□□□ -0.1
ARHGEF1-220ENST00000600274 NUCB1Q02818 461 aa14.41□□□□□ -0.1
ARHGEF1-220ENST00000600274 MEIS3Q99687 375 aa14.41□□□□□ -0.1
ARHGEF1-220ENST00000600274 USP6P35125 1406 aa14.41□□□□□ -0.1
ARHGEF1-220ENST00000600274 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 SIRT2Q8IXJ6 389 aa14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 GZF1Q9H116 711 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 TBX22Q9Y458 520 aa14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
ARHGEF1-220ENST00000600274 CDK12Q9NYV4 1490 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-220ENST00000600274 KIF20BQ96Q89 1820 aa14.39□□□□□ -0.11
ARHGEF1-220ENST00000600274 OTUD7AQ8TE49 926 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-220ENST00000600274 SIRT1Q96EB6 747 aa14.39□□□□□ -0.11
ARHGEF1-220ENST00000600274 NRXN3Q9Y4C0 1643 aa14.38□□□□□ -0.11
ARHGEF1-220ENST00000600274 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
ARHGEF1-220ENST00000600274 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
ARHGEF1-220ENST00000600274 TSHZ3Q63HK5 1081 aa14.38□□□□□ -0.11
ARHGEF1-220ENST00000600274 USP35Q9P2H5 1018 aa14.38□□□□□ -0.11
ARHGEF1-220ENST00000600274 PHF8Q9UPP1 1060 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms