RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 FTSJ3Q8IY81 847 aaKnown RBP27.74■■■□□ 2.03
GRAMD1A-212ENST00000600231 TRIM27P14373 513 aa27.72■■■□□ 2.03
GRAMD1A-212ENST00000600231 DIP2AQ14689 1571 aa27.71■■■□□ 2.03
GRAMD1A-212ENST00000600231 SSH2Q76I76 1423 aa27.71■■■□□ 2.03
GRAMD1A-212ENST00000600231 EIF4A2Q14240 407 aaKnown RBP27.7■■■□□ 2.03
GRAMD1A-212ENST00000600231 NOB1Q9ULX3 412 aaKnown RBP27.7■■■□□ 2.03
GRAMD1A-212ENST00000600231 KCNA6P17658 529 aa27.69■■■□□ 2.02
GRAMD1A-212ENST00000600231 FAM161AQ3B820 660 aa27.69■■■□□ 2.02
GRAMD1A-212ENST00000600231 ATF7IPQ6VMQ6 1270 aa27.69■■■□□ 2.02
GRAMD1A-212ENST00000600231 C8orf34Q49A92 452 aa27.68■■■□□ 2.02
GRAMD1A-212ENST00000600231 ZBTB47Q9UFB7 747 aaPredicted RBP27.68■■■□□ 2.02
GRAMD1A-212ENST00000600231 SOX12O15370 315 aa27.67■■■□□ 2.02
GRAMD1A-212ENST00000600231 CALD1Q05682 793 aaKnown RBP27.67■■■□□ 2.02
GRAMD1A-212ENST00000600231 NGDNQ8NEJ9 315 aaKnown RBP27.67■■■□□ 2.02
GRAMD1A-212ENST00000600231 RGPD8O14715 1765 aaPredicted RBP27.67■■■□□ 2.02
GRAMD1A-212ENST00000600231 CEP170BQ9Y4F5 1589 aaPredicted RBP27.67■■■□□ 2.02
GRAMD1A-212ENST00000600231 AEBP1Q8IUX7 1158 aa27.67■■■□□ 2.02
GRAMD1A-212ENST00000600231 USP31Q70CQ4 1352 aa27.66■■■□□ 2.02
GRAMD1A-212ENST00000600231 HSP90AB2PQ58FF8 381 aa27.66■■■□□ 2.02
GRAMD1A-212ENST00000600231 XRN1Q8IZH2 1706 aaKnown RBP27.66■■■□□ 2.02
GRAMD1A-212ENST00000600231 DLG5Q8TDM6 1919 aa27.65■■■□□ 2.02
GRAMD1A-212ENST00000600231 ALDH1L2Q3SY69 923 aa27.65■■■□□ 2.02
GRAMD1A-212ENST00000600231 SULT6B1Q6IMI4 303 aa27.65■■■□□ 2.02
GRAMD1A-212ENST00000600231 GNAI1P63096 354 aa27.65■■■□□ 2.02
GRAMD1A-212ENST00000600231 IFT57Q9NWB7 429 aa27.65■■■□□ 2.02
GRAMD1A-212ENST00000600231 TTC21AQ8NDW8 1320 aa27.64■■■□□ 2.02
GRAMD1A-212ENST00000600231 NALCNQ8IZF0 1738 aa27.64■■■□□ 2.01
GRAMD1A-212ENST00000600231 FAM83GA6ND36 823 aa27.64■■■□□ 2.01
GRAMD1A-212ENST00000600231 ZNF853P0CG23 659 aa27.64■■■□□ 2.01
GRAMD1A-212ENST00000600231 KIF16BQ96L93 1317 aa27.63■■■□□ 2.01
GRAMD1A-212ENST00000600231 LMOD3Q0VAK6 560 aa27.63■■■□□ 2.01
GRAMD1A-212ENST00000600231 MBIPQ9NS73 344 aa27.62■■■□□ 2.01
GRAMD1A-212ENST00000600231 ITPRIPQ8IWB1 547 aa27.62■■■□□ 2.01
GRAMD1A-212ENST00000600231 PEAK1Q9H792 1746 aa27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 RIMS1Q86UR5 1692 aaKnown RBP27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 VAMP4O75379 141 aa27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 TSPYL6Q8N831 410 aa27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 RWDD1Q9H446 243 aaPredicted RBP27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 IPO8O15397 1037 aaKnown RBP27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 DCTN1Q14203 1278 aa27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 ZNF428Q96B54 188 aa27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 DDX19BQ9UMR2 479 aa27.61■■■□□ 2.01
GRAMD1A-212ENST00000600231 PIK3R4Q99570 1358 aa27.6■■■□□ 2.01
GRAMD1A-212ENST00000600231 TMEM57Q8N5G2 664 aa27.6■■■□□ 2.01
GRAMD1A-212ENST00000600231 CFAP44Q96MT7 982 aa27.6■■■□□ 2.01
GRAMD1A-212ENST00000600231 MAP3K19Q56UN5 1328 aa27.59■■■□□ 2.01
GRAMD1A-212ENST00000600231 ELL2O00472 640 aaPredicted RBP27.58■■■□□ 2.01
GRAMD1A-212ENST00000600231 BRPF1P55201 1214 aaPredicted RBP27.57■■■□□ 2
GRAMD1A-212ENST00000600231 ANKLE2Q86XL3 938 aa27.57■■■□□ 2
GRAMD1A-212ENST00000600231 PDZRN3Q9UPQ7 1066 aa27.56■■■□□ 2
GRAMD1A-212ENST00000600231 ANKARQ7Z5J8 1434 aa27.55■■■□□ 2
GRAMD1A-212ENST00000600231 MRPL50Q8N5N7 158 aaKnown RBP27.53■■■□□ 2
GRAMD1A-212ENST00000600231 C8orf58Q8NAV2 365 aa27.53■■■□□ 2
GRAMD1A-212ENST00000600231 TWISTNBQ3B726 338 aaPredicted RBP27.52■■■□□ 2
GRAMD1A-212ENST00000600231 NLRP6P59044 892 aa27.52■■■□□ 2
GRAMD1A-212ENST00000600231 ZBTB40Q9NUA8 1239 aa27.52■■■□□ 2
GRAMD1A-212ENST00000600231 RGPD1P0DJD0 1748 aa27.51■■■□□ 2
GRAMD1A-212ENST00000600231 PIK3C2AO00443 1686 aa27.51■■□□□ 1.99
GRAMD1A-212ENST00000600231 SBNO1A3KN83 1393 aa27.51■■□□□ 1.99
GRAMD1A-212ENST00000600231 FLT4P35916 1363 aa27.5■■□□□ 1.99
GRAMD1A-212ENST00000600231 RBM33Q96EV2 1170 aaKnown RBP27.5■■□□□ 1.99
GRAMD1A-212ENST00000600231 FMN2Q9NZ56 1722 aa27.5■■□□□ 1.99
GRAMD1A-212ENST00000600231 AMPHP49418 695 aa27.49■■□□□ 1.99
GRAMD1A-212ENST00000600231 NUTM2GQ5VZR2 741 aa27.49■■□□□ 1.99
GRAMD1A-212ENST00000600231 HDAC1Q13547 482 aaPredicted RBP27.48■■□□□ 1.99
GRAMD1A-212ENST00000600231 MCM10Q7L590 875 aa27.48■■□□□ 1.99
GRAMD1A-212ENST00000600231 CHD2O14647 1828 aaKnown RBP27.47■■□□□ 1.99
GRAMD1A-212ENST00000600231 ARHGAP45Q92619 1136 aa27.47■■□□□ 1.99
GRAMD1A-212ENST00000600231 ARHGEF10O15013 1369 aa27.47■■□□□ 1.99
GRAMD1A-212ENST00000600231 DDRGK1Q96HY6 314 aa27.45■■□□□ 1.99
GRAMD1A-212ENST00000600231 SETD1BQ9UPS6 1966 aaKnown RBP27.45■■□□□ 1.98
GRAMD1A-212ENST00000600231 ABTB2Q8N961 1025 aa27.44■■□□□ 1.98
GRAMD1A-212ENST00000600231 ZNF142P52746 1687 aaPredicted RBP27.44■■□□□ 1.98
GRAMD1A-212ENST00000600231 EYA1Q99502 592 aa27.44■■□□□ 1.98
GRAMD1A-212ENST00000600231 ADAMTSL3P82987 1691 aa27.44■■□□□ 1.98
GRAMD1A-212ENST00000600231 CHL1O00533 1208 aa27.43■■□□□ 1.98
GRAMD1A-212ENST00000600231 VIRMAQ69YN4 1812 aaKnown RBP27.42■■□□□ 1.98
GRAMD1A-212ENST00000600231 PHF8Q9UPP1 1060 aa27.42■■□□□ 1.98
GRAMD1A-212ENST00000600231 FOXO3O43524 673 aa27.41■■□□□ 1.98
GRAMD1A-212ENST00000600231 MTHFSDQ2M296 383 aaKnown RBP27.41■■□□□ 1.98
GRAMD1A-212ENST00000600231 KDRP35968 1356 aa27.41■■□□□ 1.98
GRAMD1A-212ENST00000600231 KRT24Q2M2I5 525 aa27.41■■□□□ 1.98
GRAMD1A-212ENST00000600231 IGSF1Q8N6C5 1336 aa27.4■■□□□ 1.98
GRAMD1A-212ENST00000600231 ZBTB7BO15156 539 aaPredicted RBP27.4■■□□□ 1.98
GRAMD1A-212ENST00000600231 SEC24BO95487 1268 aa27.4■■□□□ 1.98
GRAMD1A-212ENST00000600231 SMC5Q8IY18 1101 aa27.39■■□□□ 1.98
GRAMD1A-212ENST00000600231 NBR1Q14596 966 aa27.39■■□□□ 1.97
GRAMD1A-212ENST00000600231 HOXC9P31274 260 aa27.38■■□□□ 1.97
GRAMD1A-212ENST00000600231 MARF1Q9Y4F3 1742 aaKnown RBP27.38■■□□□ 1.97
GRAMD1A-212ENST00000600231 ABCC4O15439 1325 aa27.38■■□□□ 1.97
GRAMD1A-212ENST00000600231 C14orf37Q86TY3 774 aa27.38■■□□□ 1.97
GRAMD1A-212ENST00000600231 USP19O94966 1318 aa27.37■■□□□ 1.97
GRAMD1A-212ENST00000600231 CRB1P82279 1406 aa27.36■■□□□ 1.97
GRAMD1A-212ENST00000600231 API5Q9BZZ5 524 aaKnown RBP27.34■■□□□ 1.97
GRAMD1A-212ENST00000600231 RTF1Q92541 710 aaKnown RBP27.34■■□□□ 1.97
GRAMD1A-212ENST00000600231 MIS18AQ9NYP9 233 aa27.34■■□□□ 1.97
GRAMD1A-212ENST00000600231 KIF24Q5T7B8 1368 aa27.34■■□□□ 1.97
GRAMD1A-212ENST00000600231 SLC4A3P48751 1232 aa27.33■■□□□ 1.97
GRAMD1A-212ENST00000600231 ESCO1Q5FWF5 840 aa27.33■■□□□ 1.97
GRAMD1A-212ENST00000600231 CHMP4BQ9H444 224 aaKnown RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms