RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 TXNDC2Q86VQ3 553 aa13.6□□□□□ -0.23
ZNF544-215ENST00000599953 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
ZNF544-215ENST00000599953 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
ZNF544-215ENST00000599953 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
ZNF544-215ENST00000599953 TNRQ92752 1358 aa13.59□□□□□ -0.23
ZNF544-215ENST00000599953 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
ZNF544-215ENST00000599953 VAMP4O75379 141 aa13.59□□□□□ -0.23
ZNF544-215ENST00000599953 FBLN1P23142 703 aa13.59□□□□□ -0.23
ZNF544-215ENST00000599953 PIK3R4Q99570 1358 aa13.58□□□□□ -0.23
ZNF544-215ENST00000599953 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
ZNF544-215ENST00000599953 NUCB1Q02818 461 aa13.58□□□□□ -0.24
ZNF544-215ENST00000599953 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
ZNF544-215ENST00000599953 C3P01024 1663 aa13.57□□□□□ -0.24
ZNF544-215ENST00000599953 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
ZNF544-215ENST00000599953 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
ZNF544-215ENST00000599953 C22orf23Q9BZE7 217 aa13.57□□□□□ -0.24
ZNF544-215ENST00000599953 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
ZNF544-215ENST00000599953 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
ZNF544-215ENST00000599953 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
ZNF544-215ENST00000599953 MBIPQ9NS73 344 aa13.56□□□□□ -0.24
ZNF544-215ENST00000599953 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
ZNF544-215ENST00000599953 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
ZNF544-215ENST00000599953 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
ZNF544-215ENST00000599953 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
ZNF544-215ENST00000599953 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
ZNF544-215ENST00000599953 THUMPD2Q9BTF0 503 aaKnown RBP13.55□□□□□ -0.24
ZNF544-215ENST00000599953 SLKQ9H2G2 1235 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-215ENST00000599953 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-215ENST00000599953 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
ZNF544-215ENST00000599953 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
ZNF544-215ENST00000599953 ABCC4O15439 1325 aa13.54□□□□□ -0.24
ZNF544-215ENST00000599953 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
ZNF544-215ENST00000599953 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
ZNF544-215ENST00000599953 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
ZNF544-215ENST00000599953 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
ZNF544-215ENST00000599953 TSPYL6Q8N831 410 aa13.53□□□□□ -0.24
ZNF544-215ENST00000599953 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
ZNF544-215ENST00000599953 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.24
ZNF544-215ENST00000599953 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.24
ZNF544-215ENST00000599953 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
ZNF544-215ENST00000599953 ROBO2Q9HCK4 1378 aa13.52□□□□□ -0.25
ZNF544-215ENST00000599953 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
ZNF544-215ENST00000599953 TTC21BQ7Z4L5 1316 aa13.51□□□□□ -0.25
ZNF544-215ENST00000599953 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
ZNF544-215ENST00000599953 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
ZNF544-215ENST00000599953 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
ZNF544-215ENST00000599953 ADAMTS13Q76LX8 1427 aa13.51□□□□□ -0.25
ZNF544-215ENST00000599953 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
ZNF544-215ENST00000599953 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
ZNF544-215ENST00000599953 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
ZNF544-215ENST00000599953 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
ZNF544-215ENST00000599953 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
ZNF544-215ENST00000599953 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
ZNF544-215ENST00000599953 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
ZNF544-215ENST00000599953 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
ZNF544-215ENST00000599953 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
ZNF544-215ENST00000599953 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
ZNF544-215ENST00000599953 USP6P35125 1406 aa13.49□□□□□ -0.25
ZNF544-215ENST00000599953 ACEP12821 1306 aa13.49□□□□□ -0.25
ZNF544-215ENST00000599953 SULT6B1Q6IMI4 303 aa13.48□□□□□ -0.25
ZNF544-215ENST00000599953 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
ZNF544-215ENST00000599953 FAM83GA6ND36 823 aa13.48□□□□□ -0.25
ZNF544-215ENST00000599953 C1orf115Q9H7X2 142 aa13.47□□□□□ -0.25
ZNF544-215ENST00000599953 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
ZNF544-215ENST00000599953 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
ZNF544-215ENST00000599953 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
ZNF544-215ENST00000599953 KIAA0232Q92628 1395 aa13.47□□□□□ -0.25
ZNF544-215ENST00000599953 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
ZNF544-215ENST00000599953 TTC21AQ8NDW8 1320 aa13.47□□□□□ -0.25
ZNF544-215ENST00000599953 SNX21Q969T3 373 aa13.46□□□□□ -0.25
ZNF544-215ENST00000599953 DCTN1Q14203 1278 aa13.46□□□□□ -0.26
ZNF544-215ENST00000599953 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.26
ZNF544-215ENST00000599953 CHL1O00533 1208 aa13.45□□□□□ -0.26
ZNF544-215ENST00000599953 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
ZNF544-215ENST00000599953 PTPRCP08575 1304 aa13.45□□□□□ -0.26
ZNF544-215ENST00000599953 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
ZNF544-215ENST00000599953 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
ZNF544-215ENST00000599953 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
ZNF544-215ENST00000599953 RGPD1P0DJD0 1748 aa13.43□□□□□ -0.26
ZNF544-215ENST00000599953 LTKP29376 864 aa13.43□□□□□ -0.26
ZNF544-215ENST00000599953 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
ZNF544-215ENST00000599953 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
ZNF544-215ENST00000599953 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
ZNF544-215ENST00000599953 SSH2Q76I76 1423 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 CDC45O75419 566 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 MCM4P33991 863 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
ZNF544-215ENST00000599953 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
ZNF544-215ENST00000599953 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 FLT4P35916 1363 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 NUTM2FA1L443 756 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 TBC1D9Q6ZT07 1266 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 MCM10Q7L590 875 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
ZNF544-215ENST00000599953 SLIT1O75093 1534 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms