RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.08
LSM12-204ENST00000591247 PMFBP1Q8TBY8 1022 aa21.83■■□□□ 1.08
LSM12-204ENST00000591247 PCDHB15Q9Y5E8 787 aa21.83■■□□□ 1.08
LSM12-204ENST00000591247 RGS3P49796 1198 aa21.82■■□□□ 1.08
LSM12-204ENST00000591247 XRN1Q8IZH2 1706 aaKnown RBP21.81■■□□□ 1.08
LSM12-204ENST00000591247 RGPD8O14715 1765 aaPredicted RBP21.81■■□□□ 1.08
LSM12-204ENST00000591247 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
LSM12-204ENST00000591247 MVPQ14764 893 aaKnown RBP21.8■■□□□ 1.08
LSM12-204ENST00000591247 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
LSM12-204ENST00000591247 TRIM27P14373 513 aa21.8■■□□□ 1.08
LSM12-204ENST00000591247 AAMPQ13685 434 aa21.8■■□□□ 1.08
LSM12-204ENST00000591247 DZIP1LQ8IYY4 767 aaKnown RBP21.8■■□□□ 1.08
LSM12-204ENST00000591247 USP35Q9P2H5 1018 aa21.8■■□□□ 1.08
LSM12-204ENST00000591247 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
LSM12-204ENST00000591247 NALCNQ8IZF0 1738 aa21.79■■□□□ 1.08
LSM12-204ENST00000591247 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
LSM12-204ENST00000591247 KCNA6P17658 529 aa21.79■■□□□ 1.08
LSM12-204ENST00000591247 NOB1Q9ULX3 412 aaKnown RBP21.78■■□□□ 1.08
LSM12-204ENST00000591247 DLG5Q8TDM6 1919 aa21.78■■□□□ 1.08
LSM12-204ENST00000591247 USP31Q70CQ4 1352 aa21.78■■□□□ 1.08
LSM12-204ENST00000591247 PEAK1Q9H792 1746 aa21.78■■□□□ 1.08
LSM12-204ENST00000591247 FTSJ3Q8IY81 847 aaKnown RBP21.78■■□□□ 1.08
LSM12-204ENST00000591247 RIMS1Q86UR5 1692 aaKnown RBP21.78■■□□□ 1.08
LSM12-204ENST00000591247 C8orf34Q49A92 452 aa21.77■■□□□ 1.08
LSM12-204ENST00000591247 AEBP1Q8IUX7 1158 aa21.77■■□□□ 1.08
LSM12-204ENST00000591247 FAM161AQ3B820 660 aa21.75■■□□□ 1.07
LSM12-204ENST00000591247 ATF7IPQ6VMQ6 1270 aa21.75■■□□□ 1.07
LSM12-204ENST00000591247 IL27Q8NEV9 243 aa21.75■■□□□ 1.07
LSM12-204ENST00000591247 SOX12O15370 315 aa21.75■■□□□ 1.07
LSM12-204ENST00000591247 HSP90AB2PQ58FF8 381 aa21.75■■□□□ 1.07
LSM12-204ENST00000591247 ZNF853P0CG23 659 aa21.74■■□□□ 1.07
LSM12-204ENST00000591247 FAM83GA6ND36 823 aa21.74■■□□□ 1.07
LSM12-204ENST00000591247 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
LSM12-204ENST00000591247 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
LSM12-204ENST00000591247 TTC21AQ8NDW8 1320 aa21.74■■□□□ 1.07
LSM12-204ENST00000591247 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
LSM12-204ENST00000591247 CALD1Q05682 793 aaKnown RBP21.73■■□□□ 1.07
LSM12-204ENST00000591247 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
LSM12-204ENST00000591247 MBIPQ9NS73 344 aa21.72■■□□□ 1.07
LSM12-204ENST00000591247 GNAI1P63096 354 aa21.72■■□□□ 1.07
LSM12-204ENST00000591247 TSPYL6Q8N831 410 aa21.72■■□□□ 1.07
LSM12-204ENST00000591247 PIK3R4Q99570 1358 aa21.72■■□□□ 1.07
LSM12-204ENST00000591247 VAMP4O75379 141 aa21.71■■□□□ 1.07
LSM12-204ENST00000591247 DCTN1Q14203 1278 aa21.71■■□□□ 1.07
LSM12-204ENST00000591247 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
LSM12-204ENST00000591247 KIF16BQ96L93 1317 aa21.7■■□□□ 1.06
LSM12-204ENST00000591247 LMOD3Q0VAK6 560 aa21.7■■□□□ 1.06
LSM12-204ENST00000591247 ITPRIPQ8IWB1 547 aa21.7■■□□□ 1.06
LSM12-204ENST00000591247 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
LSM12-204ENST00000591247 RGPD1P0DJD0 1748 aa21.7■■□□□ 1.06
LSM12-204ENST00000591247 PIK3C2AO00443 1686 aa21.69■■□□□ 1.06
LSM12-204ENST00000591247 CFAP44Q96MT7 982 aa21.69■■□□□ 1.06
LSM12-204ENST00000591247 RWDD1Q9H446 243 aaPredicted RBP21.68■■□□□ 1.06
LSM12-204ENST00000591247 ANKARQ7Z5J8 1434 aa21.68■■□□□ 1.06
LSM12-204ENST00000591247 ZNF428Q96B54 188 aa21.68■■□□□ 1.06
LSM12-204ENST00000591247 DDX19BQ9UMR2 479 aa21.68■■□□□ 1.06
LSM12-204ENST00000591247 FMN2Q9NZ56 1722 aa21.67■■□□□ 1.06
LSM12-204ENST00000591247 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
LSM12-204ENST00000591247 IPO8O15397 1037 aaKnown RBP21.67■■□□□ 1.06
LSM12-204ENST00000591247 BRPF1P55201 1214 aaPredicted RBP21.67■■□□□ 1.06
LSM12-204ENST00000591247 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
LSM12-204ENST00000591247 PDZRN3Q9UPQ7 1066 aa21.66■■□□□ 1.06
LSM12-204ENST00000591247 MRPL50Q8N5N7 158 aaKnown RBP21.66■■□□□ 1.06
LSM12-204ENST00000591247 C8orf58Q8NAV2 365 aa21.65■■□□□ 1.06
LSM12-204ENST00000591247 CHD2O14647 1828 aaKnown RBP21.65■■□□□ 1.06
LSM12-204ENST00000591247 ZNF142P52746 1687 aaPredicted RBP21.65■■□□□ 1.06
LSM12-204ENST00000591247 ADAMTSL3P82987 1691 aa21.64■■□□□ 1.06
LSM12-204ENST00000591247 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.05
LSM12-204ENST00000591247 SBNO1A3KN83 1393 aa21.64■■□□□ 1.05
LSM12-204ENST00000591247 TWISTNBQ3B726 338 aaPredicted RBP21.63■■□□□ 1.05
LSM12-204ENST00000591247 ZBTB40Q9NUA8 1239 aa21.63■■□□□ 1.05
LSM12-204ENST00000591247 FLT4P35916 1363 aa21.63■■□□□ 1.05
LSM12-204ENST00000591247 NLRP6P59044 892 aa21.62■■□□□ 1.05
LSM12-204ENST00000591247 RTN4Q9NQC3 1192 aaKnown RBP21.62■■□□□ 1.05
LSM12-204ENST00000591247 NUTM2GQ5VZR2 741 aa21.62■■□□□ 1.05
LSM12-204ENST00000591247 MARF1Q9Y4F3 1742 aaKnown RBP21.61■■□□□ 1.05
LSM12-204ENST00000591247 MCM10Q7L590 875 aa21.61■■□□□ 1.05
LSM12-204ENST00000591247 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
LSM12-204ENST00000591247 HDAC1Q13547 482 aaPredicted RBP21.61■■□□□ 1.05
LSM12-204ENST00000591247 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
LSM12-204ENST00000591247 AMPHP49418 695 aa21.6■■□□□ 1.05
LSM12-204ENST00000591247 ARHGAP45Q92619 1136 aa21.58■■□□□ 1.05
LSM12-204ENST00000591247 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
LSM12-204ENST00000591247 EYA1Q99502 592 aa21.58■■□□□ 1.05
LSM12-204ENST00000591247 SETD1BQ9UPS6 1966 aaKnown RBP21.57■■□□□ 1.04
LSM12-204ENST00000591247 CHL1O00533 1208 aa21.57■■□□□ 1.04
LSM12-204ENST00000591247 FOXO3O43524 673 aa21.57■■□□□ 1.04
LSM12-204ENST00000591247 KDRP35968 1356 aa21.57■■□□□ 1.04
LSM12-204ENST00000591247 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
LSM12-204ENST00000591247 KRT24Q2M2I5 525 aa21.56■■□□□ 1.04
LSM12-204ENST00000591247 ABTB2Q8N961 1025 aa21.56■■□□□ 1.04
LSM12-204ENST00000591247 IGSF1Q8N6C5 1336 aa21.56■■□□□ 1.04
LSM12-204ENST00000591247 SEC24BO95487 1268 aa21.55■■□□□ 1.04
LSM12-204ENST00000591247 PHF8Q9UPP1 1060 aa21.55■■□□□ 1.04
LSM12-204ENST00000591247 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
LSM12-204ENST00000591247 ZBTB7BO15156 539 aaPredicted RBP21.54■■□□□ 1.04
LSM12-204ENST00000591247 CRB1P82279 1406 aa21.54■■□□□ 1.04
LSM12-204ENST00000591247 ABCC4O15439 1325 aa21.54■■□□□ 1.04
LSM12-204ENST00000591247 USP19O94966 1318 aa21.54■■□□□ 1.04
LSM12-204ENST00000591247 HOXC9P31274 260 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms