RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 INTS3Q68E01 1043 aaKnown RBP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 CHRNA2Q15822 529 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 NAP1L5Q96NT1 182 aaPredicted RBP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 GNAI3P08754 354 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 LTKP29376 864 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 CDC42BPAQ5VT25 1732 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
RETREG3-208ENST00000589797 PTPRTO14522 1441 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 ARHGEF5Q12774 1597 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 SRGAP3O43295 1099 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 NEK4P51957 841 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 PTCD1O75127 700 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 HSP90B1P14625 803 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 CCDC85AQ96PX6 553 aaPredicted RBP17.85■□□□□ 0.45
RETREG3-208ENST00000589797 CABLES1Q8TDN4 633 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 SRCIN1Q9C0H9 1055 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
RETREG3-208ENST00000589797 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 L1TD1Q5T7N2 865 aaKnown RBP17.84■□□□□ 0.45
RETREG3-208ENST00000589797 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
RETREG3-208ENST00000589797 MEIS3Q99687 375 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 KDM5CP41229 1560 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.45
RETREG3-208ENST00000589797 VAMP4O75379 141 aa17.83■□□□□ 0.45
RETREG3-208ENST00000589797 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-208ENST00000589797 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-208ENST00000589797 MTHFSDQ2M296 383 aaKnown RBP17.83■□□□□ 0.45
RETREG3-208ENST00000589797 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 HSPA2P54652 639 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 CLASRPQ8N2M8 674 aaKnown RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 TATP17735 454 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 NSD2O96028 1365 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 ZRSR1Q15695 479 aaKnown RBP17.81■□□□□ 0.44
RETREG3-208ENST00000589797 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 MAP3K19Q56UN5 1328 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 MCTP1Q6DN14 999 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
RETREG3-208ENST00000589797 FOSBP53539 338 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 EYA1Q99502 592 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
RETREG3-208ENST00000589797 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
RETREG3-208ENST00000589797 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
RETREG3-208ENST00000589797 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
RETREG3-208ENST00000589797 FLIIQ13045 1269 aa17.79■□□□□ 0.44
RETREG3-208ENST00000589797 ZCCHC11Q5TAX3 1644 aaKnown RBP17.79■□□□□ 0.44
RETREG3-208ENST00000589797 TBC1D2Q9BYX2 928 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
RETREG3-208ENST00000589797 ABCC1P33527 1531 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 CABP4P57796 275 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 LARP6Q9BRS8 491 aaKnown RBP17.78■□□□□ 0.44
RETREG3-208ENST00000589797 NINLQ9Y2I6 1382 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 PREX2Q70Z35 1606 aa17.77■□□□□ 0.44
RETREG3-208ENST00000589797 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
RETREG3-208ENST00000589797 DNAJC2Q99543 621 aaKnown RBP17.77■□□□□ 0.44
RETREG3-208ENST00000589797 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.43
RETREG3-208ENST00000589797 DDX17Q92841 729 aaKnown RBP17.77■□□□□ 0.43
RETREG3-208ENST00000589797 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 PI4KAP2A4QPH2 592 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 PI4KAP1Q8N8J0 262 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 IL13P35225 146 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 G2E3Q7L622 706 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-208ENST00000589797 CWC27Q6UX04 472 aaKnown RBP17.75■□□□□ 0.43
RETREG3-208ENST00000589797 METP08581 1390 aa17.75■□□□□ 0.43
RETREG3-208ENST00000589797 DDX11L8A8MPP1 907 aa17.75■□□□□ 0.43
RETREG3-208ENST00000589797 TRAK2O60296 914 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms