RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 INTS3Q68E01 1043 aaKnown RBP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 CHRNA2Q15822 529 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 NAP1L5Q96NT1 182 aaPredicted RBP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
RETREG3-208ENST00000589797 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
RETREG3-208ENST00000589797 GNAI3P08754 354 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 LTKP29376 864 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 CDC42BPAQ5VT25 1732 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
RETREG3-208ENST00000589797 PTPRTO14522 1441 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 ARHGEF5Q12774 1597 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 SRGAP3O43295 1099 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 NEK4P51957 841 aa17.87■□□□□ 0.45
RETREG3-208ENST00000589797 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 PTCD1O75127 700 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 HSP90B1P14625 803 aaKnown RBP17.86■□□□□ 0.45
RETREG3-208ENST00000589797 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
RETREG3-208ENST00000589797 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 CCDC85AQ96PX6 553 aaPredicted RBP17.85■□□□□ 0.45
RETREG3-208ENST00000589797 CABLES1Q8TDN4 633 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 SRCIN1Q9C0H9 1055 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
RETREG3-208ENST00000589797 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
RETREG3-208ENST00000589797 L1TD1Q5T7N2 865 aaKnown RBP17.84■□□□□ 0.45
RETREG3-208ENST00000589797 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
RETREG3-208ENST00000589797 MEIS3Q99687 375 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 KDM5CP41229 1560 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
RETREG3-208ENST00000589797 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.45
RETREG3-208ENST00000589797 VAMP4O75379 141 aa17.83■□□□□ 0.45
RETREG3-208ENST00000589797 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-208ENST00000589797 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-208ENST00000589797 MTHFSDQ2M296 383 aaKnown RBP17.83■□□□□ 0.45
RETREG3-208ENST00000589797 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 HSPA2P54652 639 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 CLASRPQ8N2M8 674 aaKnown RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 TATP17735 454 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-208ENST00000589797 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 NSD2O96028 1365 aa17.82■□□□□ 0.44
RETREG3-208ENST00000589797 ZRSR1Q15695 479 aaKnown RBP17.81■□□□□ 0.44
RETREG3-208ENST00000589797 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 MAP3K19Q56UN5 1328 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 MCTP1Q6DN14 999 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
RETREG3-208ENST00000589797 FOSBP53539 338 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 EYA1Q99502 592 aa17.81■□□□□ 0.44
RETREG3-208ENST00000589797 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
RETREG3-208ENST00000589797 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
RETREG3-208ENST00000589797 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
RETREG3-208ENST00000589797 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
RETREG3-208ENST00000589797 FLIIQ13045 1269 aa17.79■□□□□ 0.44
RETREG3-208ENST00000589797 ZCCHC11Q5TAX3 1644 aaKnown RBP17.79■□□□□ 0.44
RETREG3-208ENST00000589797 TBC1D2Q9BYX2 928 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
RETREG3-208ENST00000589797 ABCC1P33527 1531 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 CABP4P57796 275 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 LARP6Q9BRS8 491 aaKnown RBP17.78■□□□□ 0.44
RETREG3-208ENST00000589797 NINLQ9Y2I6 1382 aa17.78■□□□□ 0.44
RETREG3-208ENST00000589797 PREX2Q70Z35 1606 aa17.77■□□□□ 0.44
RETREG3-208ENST00000589797 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
RETREG3-208ENST00000589797 DNAJC2Q99543 621 aaKnown RBP17.77■□□□□ 0.44
RETREG3-208ENST00000589797 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.43
RETREG3-208ENST00000589797 DDX17Q92841 729 aaKnown RBP17.77■□□□□ 0.43
RETREG3-208ENST00000589797 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 PI4KAP2A4QPH2 592 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 PI4KAP1Q8N8J0 262 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 IL13P35225 146 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 G2E3Q7L622 706 aa17.76■□□□□ 0.43
RETREG3-208ENST00000589797 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
RETREG3-208ENST00000589797 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-208ENST00000589797 CWC27Q6UX04 472 aaKnown RBP17.75■□□□□ 0.43
RETREG3-208ENST00000589797 METP08581 1390 aa17.75■□□□□ 0.43
RETREG3-208ENST00000589797 DDX11L8A8MPP1 907 aa17.75■□□□□ 0.43
RETREG3-208ENST00000589797 TRAK2O60296 914 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms