RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NEO1Q92859 1461 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 PLEKHF1Q96S99 279 aa14.03□□□□□ -0.16
TOP3A-217ENST00000584582 PPRC1Q5VV67 1664 aaKnown RBP14.03□□□□□ -0.16
TOP3A-217ENST00000584582 IL13P35225 146 aa14.03□□□□□ -0.16
TOP3A-217ENST00000584582 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
TOP3A-217ENST00000584582 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
TOP3A-217ENST00000584582 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
TOP3A-217ENST00000584582 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.16
TOP3A-217ENST00000584582 SYNMO15061 1565 aa14.02□□□□□ -0.16
TOP3A-217ENST00000584582 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.17
TOP3A-217ENST00000584582 IFT57Q9NWB7 429 aa14.02□□□□□ -0.17
TOP3A-217ENST00000584582 HMMRO75330 724 aa14.02□□□□□ -0.17
TOP3A-217ENST00000584582 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-217ENST00000584582 PROSER2Q86WR7 435 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-217ENST00000584582 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 USP35Q9P2H5 1018 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 INSRP06213 1382 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 MTHFSDQ2M296 383 aaKnown RBP14.01□□□□□ -0.17
TOP3A-217ENST00000584582 MAP3K19Q56UN5 1328 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 PRR36Q9H6K5 1346 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 CT47B1P0C2W7 299 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-217ENST00000584582 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 MEIS3Q99687 375 aa14.01□□□□□ -0.17
TOP3A-217ENST00000584582 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
TOP3A-217ENST00000584582 TBC1D2Q9BYX2 928 aa14□□□□□ -0.17
TOP3A-217ENST00000584582 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
TOP3A-217ENST00000584582 ANKLE2Q86XL3 938 aa14□□□□□ -0.17
TOP3A-217ENST00000584582 KCNJ4P48050 445 aa13.99□□□□□ -0.17
TOP3A-217ENST00000584582 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
TOP3A-217ENST00000584582 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
TOP3A-217ENST00000584582 ZBTB40Q9NUA8 1239 aa13.99□□□□□ -0.17
TOP3A-217ENST00000584582 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
TOP3A-217ENST00000584582 G2E3Q7L622 706 aa13.99□□□□□ -0.17
TOP3A-217ENST00000584582 PUS7Q96PZ0 661 aaKnown RBP13.99□□□□□ -0.17
TOP3A-217ENST00000584582 EYA1Q99502 592 aa13.99□□□□□ -0.17
TOP3A-217ENST00000584582 ZNF530Q6P9A1 599 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-217ENST00000584582 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
TOP3A-217ENST00000584582 INO80Q9ULG1 1556 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-217ENST00000584582 GAS2L2Q8NHY3 880 aa13.98□□□□□ -0.17
TOP3A-217ENST00000584582 ARAP3Q8WWN8 1544 aa13.98□□□□□ -0.17
TOP3A-217ENST00000584582 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
TOP3A-217ENST00000584582 ALDH1L2Q3SY69 923 aa13.97□□□□□ -0.17
TOP3A-217ENST00000584582 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
TOP3A-217ENST00000584582 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
TOP3A-217ENST00000584582 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
TOP3A-217ENST00000584582 POLR1AO95602 1720 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-217ENST00000584582 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-217ENST00000584582 SURF6O75683 361 aaKnown RBP13.96□□□□□ -0.17
TOP3A-217ENST00000584582 C9orf78Q9NZ63 289 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-217ENST00000584582 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.17
TOP3A-217ENST00000584582 GOLGA6L22H0YM25 854 aa13.96□□□□□ -0.18
TOP3A-217ENST00000584582 AAMPQ13685 434 aa13.95□□□□□ -0.18
TOP3A-217ENST00000584582 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-217ENST00000584582 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-217ENST00000584582 GNAT3A8MTJ3 354 aa13.95□□□□□ -0.18
TOP3A-217ENST00000584582 GCC1Q96CN9 775 aa13.95□□□□□ -0.18
TOP3A-217ENST00000584582 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
TOP3A-217ENST00000584582 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
TOP3A-217ENST00000584582 IL16Q14005 1332 aa13.94□□□□□ -0.18
TOP3A-217ENST00000584582 ZBTB7BO15156 539 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-217ENST00000584582 MYL6BP14649 208 aa13.94□□□□□ -0.18
TOP3A-217ENST00000584582 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
TOP3A-217ENST00000584582 ADGRB3O60242 1522 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-217ENST00000584582 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 ORAI2Q96SN7 254 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 CDC45O75419 566 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 TMEM2Q9UHN6 1383 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 NUTM1Q86Y26 1132 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-217ENST00000584582 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-217ENST00000584582 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
TOP3A-217ENST00000584582 GLI2P10070 1586 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 CHRNA2Q15822 529 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 GNAI2P04899 355 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 SIL1Q9H173 461 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 ATF3P18847 181 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 NUCB1Q02818 461 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
TOP3A-217ENST00000584582 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
TOP3A-217ENST00000584582 FLIIQ13045 1269 aa13.91□□□□□ -0.18
TOP3A-217ENST00000584582 ANP32BQ92688 251 aaKnown RBP13.91□□□□□ -0.18
TOP3A-217ENST00000584582 LRRFIP2Q9Y608 721 aaKnown RBP13.91□□□□□ -0.18
TOP3A-217ENST00000584582 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
TOP3A-217ENST00000584582 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
TOP3A-217ENST00000584582 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
TOP3A-217ENST00000584582 SMC5Q8IY18 1101 aa13.9□□□□□ -0.18
TOP3A-217ENST00000584582 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
TOP3A-217ENST00000584582 MROH2AA6NES4 1674 aa13.9□□□□□ -0.18
TOP3A-217ENST00000584582 DTNBO60941 627 aa13.89□□□□□ -0.19
TOP3A-217ENST00000584582 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
TOP3A-217ENST00000584582 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
TOP3A-217ENST00000584582 SRGAP3O43295 1099 aa13.89□□□□□ -0.19
TOP3A-217ENST00000584582 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-217ENST00000584582 FRMPD1Q5SYB0 1578 aa13.89□□□□□ -0.19
TOP3A-217ENST00000584582 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
TOP3A-217ENST00000584582 INTS3Q68E01 1043 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms