RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 CT47B1P0C2W7 299 aaPredicted RBP22.71■■□□□ 1.23
TMCO1-207ENST00000580248 TRPM3Q9HCF6 1732 aaPredicted RBP22.7■■□□□ 1.23
TMCO1-207ENST00000580248 PIK3C2AO00443 1686 aa22.7■■□□□ 1.22
TMCO1-207ENST00000580248 MAP2P11137 1827 aaKnown RBP22.7■■□□□ 1.22
TMCO1-207ENST00000580248 FCHSD2O94868 740 aa22.7■■□□□ 1.22
TMCO1-207ENST00000580248 MS4A1P11836 297 aa22.7■■□□□ 1.22
TMCO1-207ENST00000580248 PXDNQ92626 1479 aa22.69■■□□□ 1.22
TMCO1-207ENST00000580248 SBNO1A3KN83 1393 aa22.69■■□□□ 1.22
TMCO1-207ENST00000580248 TMPOP42166 694 aaKnown RBP22.69■■□□□ 1.22
TMCO1-207ENST00000580248 POLKQ9UBT6 870 aa22.69■■□□□ 1.22
TMCO1-207ENST00000580248 OVOS2A0A0J9YW53 1432 aa22.69■■□□□ 1.22
TMCO1-207ENST00000580248 OVOS2Q6IE36 1432 aa22.69■■□□□ 1.22
TMCO1-207ENST00000580248 IL16Q14005 1332 aa22.69■■□□□ 1.22
TMCO1-207ENST00000580248 BCAR3O75815 825 aa22.68■■□□□ 1.22
TMCO1-207ENST00000580248 NLRP6P59044 892 aa22.68■■□□□ 1.22
TMCO1-207ENST00000580248 CENPQQ7L2Z9 268 aaPredicted RBP22.68■■□□□ 1.22
TMCO1-207ENST00000580248 CDK12Q9NYV4 1490 aaPredicted RBP22.67■■□□□ 1.22
TMCO1-207ENST00000580248 SOS2Q07890 1332 aaPredicted RBP22.67■■□□□ 1.22
TMCO1-207ENST00000580248 ROBO1Q9Y6N7 1651 aa22.67■■□□□ 1.22
TMCO1-207ENST00000580248 UBAP1LF5GYI3 381 aa22.66■■□□□ 1.22
TMCO1-207ENST00000580248 AAMPQ13685 434 aa22.66■■□□□ 1.22
TMCO1-207ENST00000580248 NHSL1Q5SYE7 1610 aa22.66■■□□□ 1.22
TMCO1-207ENST00000580248 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
TMCO1-207ENST00000580248 NEFMP07197 916 aa22.65■■□□□ 1.22
TMCO1-207ENST00000580248 RARSP54136 660 aaKnown RBP22.65■■□□□ 1.22
TMCO1-207ENST00000580248 NUTM2GQ5VZR2 741 aa22.65■■□□□ 1.22
TMCO1-207ENST00000580248 USP54Q70EL1 1684 aa22.65■■□□□ 1.22
TMCO1-207ENST00000580248 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
TMCO1-207ENST00000580248 SPATA31A3Q5VYP0 1347 aa22.63■■□□□ 1.21
TMCO1-207ENST00000580248 ALS2Q96Q42 1657 aa22.63■■□□□ 1.21
TMCO1-207ENST00000580248 TNS3Q68CZ2 1445 aa22.62■■□□□ 1.21
TMCO1-207ENST00000580248 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
TMCO1-207ENST00000580248 PIP4K2BP78356 416 aa22.62■■□□□ 1.21
TMCO1-207ENST00000580248 TRIM35Q9UPQ4 493 aa22.62■■□□□ 1.21
TMCO1-207ENST00000580248 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
TMCO1-207ENST00000580248 FBLN1P23142 703 aa22.6■■□□□ 1.21
TMCO1-207ENST00000580248 RSPH6AQ9H0K4 717 aa22.6■■□□□ 1.21
TMCO1-207ENST00000580248 AHDC1Q5TGY3 1603 aaPredicted RBP22.6■■□□□ 1.21
TMCO1-207ENST00000580248 ARHGEF10O15013 1369 aa22.6■■□□□ 1.21
TMCO1-207ENST00000580248 RIPK4P57078 832 aa22.6■■□□□ 1.21
TMCO1-207ENST00000580248 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
TMCO1-207ENST00000580248 IL13P35225 146 aa22.57■■□□□ 1.2
TMCO1-207ENST00000580248 USP19O94966 1318 aa22.57■■□□□ 1.2
TMCO1-207ENST00000580248 MYT1Q01538 1121 aa22.57■■□□□ 1.2
TMCO1-207ENST00000580248 KCNH5Q8NCM2 988 aa22.57■■□□□ 1.2
TMCO1-207ENST00000580248 SOX12O15370 315 aa22.56■■□□□ 1.2
TMCO1-207ENST00000580248 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
TMCO1-207ENST00000580248 CALD1Q05682 793 aaKnown RBP22.55■■□□□ 1.2
TMCO1-207ENST00000580248 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
TMCO1-207ENST00000580248 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
TMCO1-207ENST00000580248 EMILIN1Q9Y6C2 1016 aa22.55■■□□□ 1.2
TMCO1-207ENST00000580248 SLIT3O75094 1523 aa22.54■■□□□ 1.2
TMCO1-207ENST00000580248 GCP02774 474 aa22.54■■□□□ 1.2
TMCO1-207ENST00000580248 NFE2L2Q16236 605 aa22.53■■□□□ 1.2
TMCO1-207ENST00000580248 MED1Q15648 1581 aaPredicted RBP22.52■■□□□ 1.2
TMCO1-207ENST00000580248 FRAT1Q92837 279 aaPredicted RBP22.52■■□□□ 1.2
TMCO1-207ENST00000580248 PDE4AP27815 886 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 CLUAP1Q96AJ1 413 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 PHLPP1O60346 1717 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 NFAT5O94916 1531 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 MAP3K19Q56UN5 1328 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 BACH2Q9BYV9 841 aa22.51■■□□□ 1.19
TMCO1-207ENST00000580248 ANP32AP39687 249 aaKnown RBP22.5■■□□□ 1.19
TMCO1-207ENST00000580248 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
TMCO1-207ENST00000580248 LMOD3Q0VAK6 560 aa22.5■■□□□ 1.19
TMCO1-207ENST00000580248 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
TMCO1-207ENST00000580248 MSH5O43196 834 aa22.49■■□□□ 1.19
TMCO1-207ENST00000580248 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
TMCO1-207ENST00000580248 CABLES1Q8TDN4 633 aa22.48■■□□□ 1.19
TMCO1-207ENST00000580248 PANK1Q8TE04 598 aa22.48■■□□□ 1.19
TMCO1-207ENST00000580248 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
TMCO1-207ENST00000580248 COG6Q9Y2V7 657 aa22.48■■□□□ 1.19
TMCO1-207ENST00000580248 COL16A1Q07092 1604 aaPredicted RBP22.48■■□□□ 1.19
TMCO1-207ENST00000580248 KIF24Q5T7B8 1368 aa22.48■■□□□ 1.19
TMCO1-207ENST00000580248 CRYBG1Q9Y4K1 1723 aa22.47■■□□□ 1.19
TMCO1-207ENST00000580248 PHRF1Q9P1Y6 1649 aaKnown RBP22.47■■□□□ 1.19
TMCO1-207ENST00000580248 AMPHP49418 695 aa22.46■■□□□ 1.19
TMCO1-207ENST00000580248 HMOX1P09601 288 aa22.45■■□□□ 1.19
TMCO1-207ENST00000580248 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.19
TMCO1-207ENST00000580248 ARHGEF25Q86VW2 580 aa22.45■■□□□ 1.19
TMCO1-207ENST00000580248 PEAK1Q9H792 1746 aa22.45■■□□□ 1.18
TMCO1-207ENST00000580248 FLT4P35916 1363 aa22.45■■□□□ 1.18
TMCO1-207ENST00000580248 PHACTR3Q96KR7 559 aa22.44■■□□□ 1.18
TMCO1-207ENST00000580248 GNAI1P63096 354 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 HSP90AB2PQ58FF8 381 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 DZIP1LQ8IYY4 767 aaKnown RBP22.43■■□□□ 1.18
TMCO1-207ENST00000580248 SMC4Q9NTJ3 1288 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 RTL1A6NKG5 1358 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 LTN1O94822 1766 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 HOXC9P31274 260 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 ZC3H6P61129 1189 aaKnown RBP22.43■■□□□ 1.18
TMCO1-207ENST00000580248 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
TMCO1-207ENST00000580248 COL22A1Q8NFW1 1626 aaPredicted RBP22.42■■□□□ 1.18
TMCO1-207ENST00000580248 KIF16BQ96L93 1317 aa22.42■■□□□ 1.18
TMCO1-207ENST00000580248 BRPF1P55201 1214 aaPredicted RBP22.42■■□□□ 1.18
TMCO1-207ENST00000580248 MVPQ14764 893 aaKnown RBP22.42■■□□□ 1.18
TMCO1-207ENST00000580248 IP6K1Q92551 441 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms