RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 CHD1LQ86WJ1 897 aa18.19■□□□□ 0.5
ITGB4-206ENST00000579662 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
ITGB4-206ENST00000579662 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
ITGB4-206ENST00000579662 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
ITGB4-206ENST00000579662 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
ITGB4-206ENST00000579662 GPS2Q13227 327 aa18.18■□□□□ 0.5
ITGB4-206ENST00000579662 NFKBIBQ15653 356 aa18.18■□□□□ 0.5
ITGB4-206ENST00000579662 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
ITGB4-206ENST00000579662 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
ITGB4-206ENST00000579662 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
ITGB4-206ENST00000579662 ARID3AQ99856 593 aa18.18■□□□□ 0.5
ITGB4-206ENST00000579662 ZNF396Q96N95 335 aaPredicted RBP18.17■□□□□ 0.5
ITGB4-206ENST00000579662 NACAP1Q9BZK3 213 aa18.17■□□□□ 0.5
ITGB4-206ENST00000579662 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
ITGB4-206ENST00000579662 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
ITGB4-206ENST00000579662 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
ITGB4-206ENST00000579662 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
ITGB4-206ENST00000579662 CCAR2Q8N163 923 aaKnown RBP18.16■□□□□ 0.5
ITGB4-206ENST00000579662 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
ITGB4-206ENST00000579662 PDE4CQ08493 712 aa18.16■□□□□ 0.5
ITGB4-206ENST00000579662 MYL6BP14649 208 aa18.16■□□□□ 0.5
ITGB4-206ENST00000579662 MRE11P49959 708 aa18.16■□□□□ 0.5
ITGB4-206ENST00000579662 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
ITGB4-206ENST00000579662 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
ITGB4-206ENST00000579662 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-206ENST00000579662 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-206ENST00000579662 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-206ENST00000579662 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
ITGB4-206ENST00000579662 ADGRF5Q8IZF2 1346 aa18.14■□□□□ 0.5
ITGB4-206ENST00000579662 SRGAP3O43295 1099 aa18.14■□□□□ 0.49
ITGB4-206ENST00000579662 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
ITGB4-206ENST00000579662 NOS1P29475 1434 aa18.14■□□□□ 0.49
ITGB4-206ENST00000579662 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 ZNF592Q92610 1267 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 MPHOSPH8Q99549 860 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
ITGB4-206ENST00000579662 SIL1Q9H173 461 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 AACSQ86V21 672 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 BACH2Q9BYV9 841 aa18.13■□□□□ 0.49
ITGB4-206ENST00000579662 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
ITGB4-206ENST00000579662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
ITGB4-206ENST00000579662 KLHL34Q8N239 644 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 STARD3NLO95772 234 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 IDI1Q13907 227 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 TXLNAP40222 546 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 CEP126Q9P2H0 1117 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
ITGB4-206ENST00000579662 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
ITGB4-206ENST00000579662 TRAK2O60296 914 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 CTNNA3Q9UI47 895 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 IKQ13123 557 aaPredicted RBP18.1■□□□□ 0.49
ITGB4-206ENST00000579662 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
ITGB4-206ENST00000579662 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
ITGB4-206ENST00000579662 RAB11FIP3O75154 756 aa18.09■□□□□ 0.49
ITGB4-206ENST00000579662 NASPP49321 788 aaPredicted RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
ITGB4-206ENST00000579662 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
ITGB4-206ENST00000579662 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 KRT32Q14532 448 aa18.09■□□□□ 0.49
ITGB4-206ENST00000579662 RRP12Q5JTH9 1297 aaKnown RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 WDR33Q9C0J8 1336 aaKnown RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 TAF7Q15545 349 aaPredicted RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 TRIM22Q8IYM9 498 aa18.09■□□□□ 0.49
ITGB4-206ENST00000579662 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 NME9Q86XW9 330 aa18.09■□□□□ 0.49
ITGB4-206ENST00000579662 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 PDIA4P13667 645 aaKnown RBP18.09■□□□□ 0.49
ITGB4-206ENST00000579662 PLCH2O75038 1416 aa18.08■□□□□ 0.48
ITGB4-206ENST00000579662 STK38Q15208 465 aa18.08■□□□□ 0.48
ITGB4-206ENST00000579662 PIP4K2AP48426 406 aaPredicted RBP18.08■□□□□ 0.48
ITGB4-206ENST00000579662 TSPY26PQ9H489 355 aa18.07■□□□□ 0.48
ITGB4-206ENST00000579662 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
ITGB4-206ENST00000579662 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
ITGB4-206ENST00000579662 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
ITGB4-206ENST00000579662 PRM3Q9NNZ6 103 aa18.07■□□□□ 0.48
ITGB4-206ENST00000579662 SF3B2Q13435 895 aaKnown RBP18.07■□□□□ 0.48
ITGB4-206ENST00000579662 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
ITGB4-206ENST00000579662 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 MCM10Q7L590 875 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 CDKL5O76039 1030 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 EPS15P42566 896 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
ITGB4-206ENST00000579662 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 MTMR7Q9Y216 660 aa18.06■□□□□ 0.48
ITGB4-206ENST00000579662 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms