RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 IGSF3O75054 1194 aa17.39■□□□□ 0.37
RBFOX3-201ENST00000578887 TRIM44Q96DX7 344 aaPredicted RBP17.39■□□□□ 0.37
RBFOX3-201ENST00000578887 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
RBFOX3-201ENST00000578887 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
RBFOX3-201ENST00000578887 TULP4Q9NRJ4 1543 aa17.38■□□□□ 0.37
RBFOX3-201ENST00000578887 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
RBFOX3-201ENST00000578887 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
RBFOX3-201ENST00000578887 STK26Q9P289 416 aa17.37■□□□□ 0.37
RBFOX3-201ENST00000578887 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
RBFOX3-201ENST00000578887 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
RBFOX3-201ENST00000578887 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 PKNOX2Q96KN3 472 aa17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 ESF1Q9H501 851 aaKnown RBP17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 ATAD2Q6PL18 1390 aa17.36■□□□□ 0.37
RBFOX3-201ENST00000578887 PKP1Q13835 747 aa17.35■□□□□ 0.37
RBFOX3-201ENST00000578887 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
RBFOX3-201ENST00000578887 K7ELQ4 463 aaPredicted RBP17.35■□□□□ 0.37
RBFOX3-201ENST00000578887 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
RBFOX3-201ENST00000578887 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
RBFOX3-201ENST00000578887 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
RBFOX3-201ENST00000578887 FYB1O15117 783 aa17.34■□□□□ 0.37
RBFOX3-201ENST00000578887 COL3A1P02461 1466 aaPredicted RBP17.33■□□□□ 0.37
RBFOX3-201ENST00000578887 SETBP1Q9Y6X0 1596 aa17.33■□□□□ 0.37
RBFOX3-201ENST00000578887 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.36
RBFOX3-201ENST00000578887 USP32Q8NFA0 1604 aa17.33■□□□□ 0.36
RBFOX3-201ENST00000578887 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
RBFOX3-201ENST00000578887 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.36
RBFOX3-201ENST00000578887 ABCC11Q96J66 1382 aa17.33■□□□□ 0.36
RBFOX3-201ENST00000578887 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
RBFOX3-201ENST00000578887 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
RBFOX3-201ENST00000578887 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
RBFOX3-201ENST00000578887 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
RBFOX3-201ENST00000578887 DDX49Q9Y6V7 483 aaKnown RBP17.32■□□□□ 0.36
RBFOX3-201ENST00000578887 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
RBFOX3-201ENST00000578887 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
RBFOX3-201ENST00000578887 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
RBFOX3-201ENST00000578887 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
RBFOX3-201ENST00000578887 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
RBFOX3-201ENST00000578887 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
RBFOX3-201ENST00000578887 HMOX1P09601 288 aa17.3■□□□□ 0.36
RBFOX3-201ENST00000578887 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
RBFOX3-201ENST00000578887 ADRA2BP18089 450 aa17.29■□□□□ 0.36
RBFOX3-201ENST00000578887 CDK11BP21127 795 aaKnown RBP17.29■□□□□ 0.36
RBFOX3-201ENST00000578887 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
RBFOX3-201ENST00000578887 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
RBFOX3-201ENST00000578887 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
RBFOX3-201ENST00000578887 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 SKOR2Q2VWA4 1001 aaPredicted RBP17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 GLIPR1L2Q4G1C9 344 aa17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 OTUD7AQ8TE49 926 aaPredicted RBP17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 VAMP4O75379 141 aa17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 IL16Q14005 1332 aa17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 ZFYVE9O95405 1425 aa17.28■□□□□ 0.36
RBFOX3-201ENST00000578887 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.36
RBFOX3-201ENST00000578887 NSD2O96028 1365 aa17.27■□□□□ 0.36
RBFOX3-201ENST00000578887 MRPL50Q8N5N7 158 aaKnown RBP17.27■□□□□ 0.35
RBFOX3-201ENST00000578887 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.35
RBFOX3-201ENST00000578887 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
RBFOX3-201ENST00000578887 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
RBFOX3-201ENST00000578887 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
RBFOX3-201ENST00000578887 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
RBFOX3-201ENST00000578887 RBM27Q9P2N5 1060 aaKnown RBP17.26■□□□□ 0.35
RBFOX3-201ENST00000578887 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
RBFOX3-201ENST00000578887 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
RBFOX3-201ENST00000578887 MED14O60244 1454 aa17.25■□□□□ 0.35
RBFOX3-201ENST00000578887 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
RBFOX3-201ENST00000578887 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
RBFOX3-201ENST00000578887 RBSNQ9H1K0 784 aa17.25■□□□□ 0.35
RBFOX3-201ENST00000578887 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 ZSCAN30Q86W11 494 aa17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 TNRQ92752 1358 aa17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 APBB1O00213 710 aa17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 PLEKHM2Q8IWE5 1019 aa17.24■□□□□ 0.35
RBFOX3-201ENST00000578887 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 LMBRD1Q9NUN5 540 aa17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 CDC45O75419 566 aa17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
RBFOX3-201ENST00000578887 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 LRRC7Q96NW7 1537 aa17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
RBFOX3-201ENST00000578887 C3P01024 1663 aa17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 SMARCA5O60264 1052 aaPredicted RBP17.21■□□□□ 0.35
RBFOX3-201ENST00000578887 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms