RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 NME9Q86XW9 330 aa12.1□□□□□ -0.47
NCBP3-206ENST00000576523 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
NCBP3-206ENST00000576523 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
NCBP3-206ENST00000576523 HDGFL2Q7Z4V5 671 aaPredicted RBP12.09□□□□□ -0.47
NCBP3-206ENST00000576523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.09□□□□□ -0.47
NCBP3-206ENST00000576523 PANK3Q9H999 370 aa12.09□□□□□ -0.47
NCBP3-206ENST00000576523 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
NCBP3-206ENST00000576523 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
NCBP3-206ENST00000576523 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
NCBP3-206ENST00000576523 ABTB2Q8N961 1025 aa12.08□□□□□ -0.48
NCBP3-206ENST00000576523 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
NCBP3-206ENST00000576523 NUTM2BA6NNL0 878 aaPredicted RBP12.06□□□□□ -0.48
NCBP3-206ENST00000576523 NUTM2EB1AL46 878 aaPredicted RBP12.06□□□□□ -0.48
NCBP3-206ENST00000576523 FYB1O15117 783 aa12.06□□□□□ -0.48
NCBP3-206ENST00000576523 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
NCBP3-206ENST00000576523 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
NCBP3-206ENST00000576523 NUTM2AQ8IVF1 878 aaPredicted RBP12.06□□□□□ -0.48
NCBP3-206ENST00000576523 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
NCBP3-206ENST00000576523 SLIT2O94813 1529 aa12.05□□□□□ -0.48
NCBP3-206ENST00000576523 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
NCBP3-206ENST00000576523 NLRP6P59044 892 aa12.04□□□□□ -0.48
NCBP3-206ENST00000576523 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
NCBP3-206ENST00000576523 FBLN1P23142 703 aa12.03□□□□□ -0.48
NCBP3-206ENST00000576523 NLRP13Q86W25 1043 aa12.03□□□□□ -0.48
NCBP3-206ENST00000576523 FAM208AQ9UK61 1670 aaKnown RBP12.03□□□□□ -0.48
NCBP3-206ENST00000576523 KIAA0232Q92628 1395 aa12.03□□□□□ -0.48
NCBP3-206ENST00000576523 ABCC6O95255 1503 aa12.02□□□□□ -0.48
NCBP3-206ENST00000576523 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
NCBP3-206ENST00000576523 GCP02774 474 aa12.02□□□□□ -0.49
NCBP3-206ENST00000576523 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
NCBP3-206ENST00000576523 RGS17Q9UGC6 210 aaPredicted RBP12.02□□□□□ -0.49
NCBP3-206ENST00000576523 CPDO75976 1380 aa12.02□□□□□ -0.49
NCBP3-206ENST00000576523 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.49
NCBP3-206ENST00000576523 GLI3P10071 1580 aa12.01□□□□□ -0.49
NCBP3-206ENST00000576523 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
NCBP3-206ENST00000576523 FAM83GA6ND36 823 aa12□□□□□ -0.49
NCBP3-206ENST00000576523 ZC3H6P61129 1189 aaKnown RBP12□□□□□ -0.49
NCBP3-206ENST00000576523 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
NCBP3-206ENST00000576523 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
NCBP3-206ENST00000576523 SOX12O15370 315 aa11.99□□□□□ -0.49
NCBP3-206ENST00000576523 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
NCBP3-206ENST00000576523 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
NCBP3-206ENST00000576523 NSD2O96028 1365 aa11.99□□□□□ -0.49
NCBP3-206ENST00000576523 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 SHANK3Q9BYB0 1731 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 COL5A2P05997 1499 aaPredicted RBP11.98□□□□□ -0.49
NCBP3-206ENST00000576523 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 AFF2P51816 1311 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 COG3Q96JB2 828 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
NCBP3-206ENST00000576523 ATRNO75882 1429 aa11.97□□□□□ -0.49
NCBP3-206ENST00000576523 SMG6Q86US8 1419 aaKnown RBP11.97□□□□□ -0.49
NCBP3-206ENST00000576523 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
NCBP3-206ENST00000576523 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
NCBP3-206ENST00000576523 THSD7AQ9UPZ6 1657 aa11.97□□□□□ -0.49
NCBP3-206ENST00000576523 AATKQ6ZMQ8 1374 aa11.96□□□□□ -0.49
NCBP3-206ENST00000576523 MAP3K19Q56UN5 1328 aa11.96□□□□□ -0.49
NCBP3-206ENST00000576523 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
NCBP3-206ENST00000576523 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
NCBP3-206ENST00000576523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
NCBP3-206ENST00000576523 AXIN2Q9Y2T1 843 aa11.96□□□□□ -0.49
NCBP3-206ENST00000576523 PARP4Q9UKK3 1724 aaKnown RBP11.95□□□□□ -0.5
NCBP3-206ENST00000576523 RRS1Q15050 365 aaKnown RBP11.95□□□□□ -0.5
NCBP3-206ENST00000576523 KCNH5Q8NCM2 988 aa11.95□□□□□ -0.5
NCBP3-206ENST00000576523 PRDM11Q9NQV5 511 aa11.95□□□□□ -0.5
NCBP3-206ENST00000576523 CC2D1BQ5T0F9 858 aaKnown RBP11.94□□□□□ -0.5
NCBP3-206ENST00000576523 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
NCBP3-206ENST00000576523 NGLY1Q96IV0 654 aa11.94□□□□□ -0.5
NCBP3-206ENST00000576523 BTG4Q9NY30 223 aa11.94□□□□□ -0.5
NCBP3-206ENST00000576523 EMILIN1Q9Y6C2 1016 aa11.94□□□□□ -0.5
NCBP3-206ENST00000576523 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
NCBP3-206ENST00000576523 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
NCBP3-206ENST00000576523 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
NCBP3-206ENST00000576523 ZBTB7CA1YPR0 619 aa11.93□□□□□ -0.5
NCBP3-206ENST00000576523 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
NCBP3-206ENST00000576523 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
NCBP3-206ENST00000576523 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
NCBP3-206ENST00000576523 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
NCBP3-206ENST00000576523 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
NCBP3-206ENST00000576523 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
NCBP3-206ENST00000576523 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
NCBP3-206ENST00000576523 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
NCBP3-206ENST00000576523 USP21Q9UK80 565 aa11.92□□□□□ -0.5
NCBP3-206ENST00000576523 HOXC9P31274 260 aa11.91□□□□□ -0.5
NCBP3-206ENST00000576523 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
NCBP3-206ENST00000576523 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
NCBP3-206ENST00000576523 BLMP54132 1417 aaPredicted RBP11.91□□□□□ -0.5
NCBP3-206ENST00000576523 PKD1L3Q7Z443 1732 aa11.91□□□□□ -0.5
NCBP3-206ENST00000576523 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
NCBP3-206ENST00000576523 IP6K1Q92551 441 aa11.9□□□□□ -0.5
NCBP3-206ENST00000576523 FLT4P35916 1363 aa11.9□□□□□ -0.5
NCBP3-206ENST00000576523 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
NCBP3-206ENST00000576523 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.51
NCBP3-206ENST00000576523 ERBB3P21860 1342 aa11.89□□□□□ -0.51
NCBP3-206ENST00000576523 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
NCBP3-206ENST00000576523 LARP1Q6PKG0 1096 aaKnown RBP11.89□□□□□ -0.51
NCBP3-206ENST00000576523 INSRP06213 1382 aa11.89□□□□□ -0.51
NCBP3-206ENST00000576523 EP400Q96L91 3159 aa11.88□□□□□ -0.51
NCBP3-206ENST00000576523 RGS12O14924 1447 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms