RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
VPS33B-208ENST00000574755 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
VPS33B-208ENST00000574755 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
VPS33B-208ENST00000574755 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
VPS33B-208ENST00000574755 EIF4A2Q14240 407 aaKnown RBP18.04■□□□□ 0.48
VPS33B-208ENST00000574755 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
VPS33B-208ENST00000574755 PEAK1Q9H792 1746 aa18.04■□□□□ 0.48
VPS33B-208ENST00000574755 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
VPS33B-208ENST00000574755 AAMPQ13685 434 aa18.03■□□□□ 0.48
VPS33B-208ENST00000574755 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
VPS33B-208ENST00000574755 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
VPS33B-208ENST00000574755 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
VPS33B-208ENST00000574755 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
VPS33B-208ENST00000574755 IGHDP01880 384 aa18.02■□□□□ 0.48
VPS33B-208ENST00000574755 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
VPS33B-208ENST00000574755 PIK3C2AO00443 1686 aa18.02■□□□□ 0.47
VPS33B-208ENST00000574755 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.47
VPS33B-208ENST00000574755 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.47
VPS33B-208ENST00000574755 SULT6B1Q6IMI4 303 aa18.01■□□□□ 0.47
VPS33B-208ENST00000574755 MVPQ14764 893 aaKnown RBP18■□□□□ 0.47
VPS33B-208ENST00000574755 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
VPS33B-208ENST00000574755 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
VPS33B-208ENST00000574755 GNAI1P63096 354 aa17.99■□□□□ 0.47
VPS33B-208ENST00000574755 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
VPS33B-208ENST00000574755 MAP3K19Q56UN5 1328 aa17.99■□□□□ 0.47
VPS33B-208ENST00000574755 IFT57Q9NWB7 429 aa17.99■□□□□ 0.47
VPS33B-208ENST00000574755 TRIM27P14373 513 aa17.98■□□□□ 0.47
VPS33B-208ENST00000574755 RGS3P49796 1198 aa17.98■□□□□ 0.47
VPS33B-208ENST00000574755 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
VPS33B-208ENST00000574755 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
VPS33B-208ENST00000574755 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
VPS33B-208ENST00000574755 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
VPS33B-208ENST00000574755 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
VPS33B-208ENST00000574755 ALDH1L2Q3SY69 923 aa17.97■□□□□ 0.47
VPS33B-208ENST00000574755 FLT4P35916 1363 aa17.97■□□□□ 0.47
VPS33B-208ENST00000574755 FAM83GA6ND36 823 aa17.97■□□□□ 0.47
VPS33B-208ENST00000574755 NLRP6P59044 892 aa17.97■□□□□ 0.47
VPS33B-208ENST00000574755 SBNO1A3KN83 1393 aa17.97■□□□□ 0.47
VPS33B-208ENST00000574755 ZNF428Q96B54 188 aa17.96■□□□□ 0.47
VPS33B-208ENST00000574755 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
VPS33B-208ENST00000574755 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
VPS33B-208ENST00000574755 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
VPS33B-208ENST00000574755 PCDHB15Q9Y5E8 787 aa17.96■□□□□ 0.47
VPS33B-208ENST00000574755 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
VPS33B-208ENST00000574755 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
VPS33B-208ENST00000574755 AMPHP49418 695 aa17.95■□□□□ 0.46
VPS33B-208ENST00000574755 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
VPS33B-208ENST00000574755 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
VPS33B-208ENST00000574755 DCTN1Q14203 1278 aa17.95■□□□□ 0.46
VPS33B-208ENST00000574755 NUTM2GQ5VZR2 741 aa17.94■□□□□ 0.46
VPS33B-208ENST00000574755 ITPRIPQ8IWB1 547 aa17.94■□□□□ 0.46
VPS33B-208ENST00000574755 NPHP4O75161 1426 aaPredicted RBP17.94■□□□□ 0.46
VPS33B-208ENST00000574755 ABTB2Q8N961 1025 aa17.94■□□□□ 0.46
VPS33B-208ENST00000574755 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
VPS33B-208ENST00000574755 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
VPS33B-208ENST00000574755 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
VPS33B-208ENST00000574755 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
VPS33B-208ENST00000574755 PHF8Q9UPP1 1060 aa17.93■□□□□ 0.46
VPS33B-208ENST00000574755 VAMP4O75379 141 aa17.93■□□□□ 0.46
VPS33B-208ENST00000574755 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
VPS33B-208ENST00000574755 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
VPS33B-208ENST00000574755 USP54Q70EL1 1684 aa17.91■□□□□ 0.46
VPS33B-208ENST00000574755 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
VPS33B-208ENST00000574755 FAM161AQ3B820 660 aa17.91■□□□□ 0.46
VPS33B-208ENST00000574755 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
VPS33B-208ENST00000574755 RWDD1Q9H446 243 aaPredicted RBP17.91■□□□□ 0.46
VPS33B-208ENST00000574755 TWISTNBQ3B726 338 aaPredicted RBP17.91■□□□□ 0.46
VPS33B-208ENST00000574755 BRPF1P55201 1214 aaPredicted RBP17.9■□□□□ 0.46
VPS33B-208ENST00000574755 TMEM57Q8N5G2 664 aa17.9■□□□□ 0.46
VPS33B-208ENST00000574755 NOP58Q9Y2X3 529 aaKnown RBP17.9■□□□□ 0.46
VPS33B-208ENST00000574755 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 ESCO1Q5FWF5 840 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 MCM10Q7L590 875 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 EYA1Q99502 592 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 KDRP35968 1356 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 KIF24Q5T7B8 1368 aa17.88■□□□□ 0.45
VPS33B-208ENST00000574755 IGSF1Q8N6C5 1336 aa17.87■□□□□ 0.45
VPS33B-208ENST00000574755 HOXC9P31274 260 aa17.87■□□□□ 0.45
VPS33B-208ENST00000574755 MRPL50Q8N5N7 158 aaKnown RBP17.87■□□□□ 0.45
VPS33B-208ENST00000574755 PSME1Q06323 249 aa17.86■□□□□ 0.45
VPS33B-208ENST00000574755 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
VPS33B-208ENST00000574755 MTHFSDQ2M296 383 aaKnown RBP17.85■□□□□ 0.45
VPS33B-208ENST00000574755 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
VPS33B-208ENST00000574755 LTN1O94822 1766 aa17.85■□□□□ 0.45
VPS33B-208ENST00000574755 ZBTB40Q9NUA8 1239 aa17.84■□□□□ 0.45
VPS33B-208ENST00000574755 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
VPS33B-208ENST00000574755 RTF1Q92541 710 aaKnown RBP17.84■□□□□ 0.45
VPS33B-208ENST00000574755 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
VPS33B-208ENST00000574755 CHL1O00533 1208 aa17.83■□□□□ 0.45
VPS33B-208ENST00000574755 FOXO3O43524 673 aa17.83■□□□□ 0.45
VPS33B-208ENST00000574755 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
VPS33B-208ENST00000574755 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
VPS33B-208ENST00000574755 HAP1P54257 671 aaPredicted RBP17.82■□□□□ 0.44
VPS33B-208ENST00000574755 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
VPS33B-208ENST00000574755 LTV1Q96GA3 475 aaPredicted RBP17.82■□□□□ 0.44
VPS33B-208ENST00000574755 RTL1A6NKG5 1358 aa17.81■□□□□ 0.44
VPS33B-208ENST00000574755 CRB1P82279 1406 aa17.81■□□□□ 0.44
VPS33B-208ENST00000574755 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
VPS33B-208ENST00000574755 ORAI2Q96SN7 254 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 287.5 ms