RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
CAPN3-219ENST00000569136 JCADQ9P266 1359 aa13.09□□□□□ -0.31
CAPN3-219ENST00000569136 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
CAPN3-219ENST00000569136 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
CAPN3-219ENST00000569136 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-219ENST00000569136 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
CAPN3-219ENST00000569136 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-219ENST00000569136 FOXO3O43524 673 aa13.07□□□□□ -0.32
CAPN3-219ENST00000569136 SLC34A2O95436 690 aa13.07□□□□□ -0.32
CAPN3-219ENST00000569136 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
CAPN3-219ENST00000569136 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
CAPN3-219ENST00000569136 SPATA31A6Q5VVP1 1343 aa13.07□□□□□ -0.32
CAPN3-219ENST00000569136 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
CAPN3-219ENST00000569136 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
CAPN3-219ENST00000569136 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-219ENST00000569136 PSME1Q06323 249 aa13.06□□□□□ -0.32
CAPN3-219ENST00000569136 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-219ENST00000569136 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
CAPN3-219ENST00000569136 MINK1Q8N4C8 1332 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-219ENST00000569136 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
CAPN3-219ENST00000569136 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-219ENST00000569136 DLC1Q96QB1 1528 aa13.04□□□□□ -0.32
CAPN3-219ENST00000569136 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
CAPN3-219ENST00000569136 HIRIP3Q9BW71 556 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-219ENST00000569136 DDX17Q92841 729 aaKnown RBP13.03□□□□□ -0.32
CAPN3-219ENST00000569136 CDK19Q9BWU1 502 aa13.03□□□□□ -0.32
CAPN3-219ENST00000569136 ASXL1Q8IXJ9 1541 aa13.03□□□□□ -0.32
CAPN3-219ENST00000569136 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
CAPN3-219ENST00000569136 EVI5O60447 810 aa13.02□□□□□ -0.33
CAPN3-219ENST00000569136 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
CAPN3-219ENST00000569136 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
CAPN3-219ENST00000569136 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
CAPN3-219ENST00000569136 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
CAPN3-219ENST00000569136 ARIH1Q9Y4X5 557 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-219ENST00000569136 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-219ENST00000569136 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
CAPN3-219ENST00000569136 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
CAPN3-219ENST00000569136 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
CAPN3-219ENST00000569136 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
CAPN3-219ENST00000569136 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
CAPN3-219ENST00000569136 LAMC1P11047 1609 aa13.01□□□□□ -0.33
CAPN3-219ENST00000569136 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
CAPN3-219ENST00000569136 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
CAPN3-219ENST00000569136 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
CAPN3-219ENST00000569136 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
CAPN3-219ENST00000569136 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
CAPN3-219ENST00000569136 ANKARQ7Z5J8 1434 aa12.99□□□□□ -0.33
CAPN3-219ENST00000569136 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-219ENST00000569136 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-219ENST00000569136 SEMA3EO15041 775 aa12.99□□□□□ -0.33
CAPN3-219ENST00000569136 NUDT7P0C024 238 aa12.99□□□□□ -0.33
CAPN3-219ENST00000569136 PDIA6Q15084 440 aa12.99□□□□□ -0.33
CAPN3-219ENST00000569136 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-219ENST00000569136 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
CAPN3-219ENST00000569136 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
CAPN3-219ENST00000569136 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-219ENST00000569136 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
CAPN3-219ENST00000569136 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-219ENST00000569136 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
CAPN3-219ENST00000569136 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
CAPN3-219ENST00000569136 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
CAPN3-219ENST00000569136 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
CAPN3-219ENST00000569136 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-219ENST00000569136 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
CAPN3-219ENST00000569136 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
CAPN3-219ENST00000569136 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-219ENST00000569136 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
CAPN3-219ENST00000569136 PRR36Q9H6K5 1346 aa12.95□□□□□ -0.34
CAPN3-219ENST00000569136 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
CAPN3-219ENST00000569136 ILDR2Q71H61 639 aa12.94□□□□□ -0.34
CAPN3-219ENST00000569136 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
CAPN3-219ENST00000569136 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
CAPN3-219ENST00000569136 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
CAPN3-219ENST00000569136 GRXCR2A6NFK2 248 aa12.93□□□□□ -0.34
CAPN3-219ENST00000569136 TULP1O00294 542 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-219ENST00000569136 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
CAPN3-219ENST00000569136 DDX12PQ92771 950 aa12.93□□□□□ -0.34
CAPN3-219ENST00000569136 ST18O60284 1047 aa12.92□□□□□ -0.34
CAPN3-219ENST00000569136 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
CAPN3-219ENST00000569136 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-219ENST00000569136 NALCNQ8IZF0 1738 aa12.92□□□□□ -0.34
CAPN3-219ENST00000569136 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
CAPN3-219ENST00000569136 COL16A1Q07092 1604 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-219ENST00000569136 ACEP12821 1306 aa12.91□□□□□ -0.34
CAPN3-219ENST00000569136 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
CAPN3-219ENST00000569136 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
CAPN3-219ENST00000569136 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-219ENST00000569136 C8orf37Q96NL8 207 aa12.91□□□□□ -0.34
CAPN3-219ENST00000569136 CABP1Q9NZU7 370 aa12.91□□□□□ -0.34
CAPN3-219ENST00000569136 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-219ENST00000569136 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
CAPN3-219ENST00000569136 FNBP4Q8N3X1 1017 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-219ENST00000569136 PXDNQ92626 1479 aa12.9□□□□□ -0.34
CAPN3-219ENST00000569136 SOCS7O14512 581 aa12.89□□□□□ -0.35
CAPN3-219ENST00000569136 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
CAPN3-219ENST00000569136 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
CAPN3-219ENST00000569136 TULP4Q9NRJ4 1543 aa12.88□□□□□ -0.35
CAPN3-219ENST00000569136 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
CAPN3-219ENST00000569136 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-219ENST00000569136 RXRBP28702 533 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms