RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 MARF1Q9Y4F3 1742 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 AMPHP49418 695 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 NUTM2GQ5VZR2 741 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 RSPH6AQ9H0K4 717 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 FLT4P35916 1363 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 PEAK1Q9H792 1746 aa14.21□□□□□ -0.13
VPS9D1-206ENST00000567379 MAP3K19Q56UN5 1328 aa14.21□□□□□ -0.13
VPS9D1-206ENST00000567379 FOXO3O43524 673 aa14.21□□□□□ -0.13
VPS9D1-206ENST00000567379 TMPOP42166 694 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-206ENST00000567379 KRT28Q7Z3Y7 464 aa14.21□□□□□ -0.13
VPS9D1-206ENST00000567379 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-206ENST00000567379 SRCAPQ6ZRS2 3230 aa14.2□□□□□ -0.14
VPS9D1-206ENST00000567379 XIRP1Q702N8 1843 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-206ENST00000567379 PRKAR2BP31323 418 aa14.2□□□□□ -0.14
VPS9D1-206ENST00000567379 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-206ENST00000567379 HMOX1P09601 288 aa14.19□□□□□ -0.14
VPS9D1-206ENST00000567379 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-206ENST00000567379 KCNH5Q8NCM2 988 aa14.19□□□□□ -0.14
VPS9D1-206ENST00000567379 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-206ENST00000567379 RIPK4P57078 832 aa14.18□□□□□ -0.14
VPS9D1-206ENST00000567379 HSP90AB2PQ58FF8 381 aa14.18□□□□□ -0.14
VPS9D1-206ENST00000567379 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-206ENST00000567379 NFE2L2Q16236 605 aa14.17□□□□□ -0.14
VPS9D1-206ENST00000567379 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
VPS9D1-206ENST00000567379 NPHP3Q7Z494 1330 aa14.16□□□□□ -0.14
VPS9D1-206ENST00000567379 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-206ENST00000567379 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
VPS9D1-206ENST00000567379 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
VPS9D1-206ENST00000567379 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-206ENST00000567379 ARHGEF10O15013 1369 aa14.16□□□□□ -0.14
VPS9D1-206ENST00000567379 IL16Q14005 1332 aa14.15□□□□□ -0.14
VPS9D1-206ENST00000567379 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
VPS9D1-206ENST00000567379 HOXC9P31274 260 aa14.15□□□□□ -0.14
VPS9D1-206ENST00000567379 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
VPS9D1-206ENST00000567379 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
VPS9D1-206ENST00000567379 NFAT5O94916 1531 aa14.15□□□□□ -0.14
VPS9D1-206ENST00000567379 LTN1O94822 1766 aa14.14□□□□□ -0.15
VPS9D1-206ENST00000567379 LMOD3Q0VAK6 560 aa14.14□□□□□ -0.15
VPS9D1-206ENST00000567379 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
VPS9D1-206ENST00000567379 SLIT3O75094 1523 aa14.14□□□□□ -0.15
VPS9D1-206ENST00000567379 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
VPS9D1-206ENST00000567379 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 IP6K1Q92551 441 aa14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 PHACTR3Q96KR7 559 aa14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 ALS2Q96Q42 1657 aa14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 USP19O94966 1318 aa14.13□□□□□ -0.15
VPS9D1-206ENST00000567379 GCP02774 474 aa14.11□□□□□ -0.15
VPS9D1-206ENST00000567379 ZNF772Q68DY9 489 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-206ENST00000567379 AEBP1Q8IUX7 1158 aa14.11□□□□□ -0.15
VPS9D1-206ENST00000567379 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-206ENST00000567379 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
VPS9D1-206ENST00000567379 JCADQ9P266 1359 aa14.1□□□□□ -0.15
VPS9D1-206ENST00000567379 TNS3Q68CZ2 1445 aa14.1□□□□□ -0.15
VPS9D1-206ENST00000567379 ZBTB7CA1YPR0 619 aa14.1□□□□□ -0.15
VPS9D1-206ENST00000567379 EYA1Q99502 592 aa14.1□□□□□ -0.15
VPS9D1-206ENST00000567379 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
VPS9D1-206ENST00000567379 DLG5Q8TDM6 1919 aa14.09□□□□□ -0.15
VPS9D1-206ENST00000567379 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
VPS9D1-206ENST00000567379 ARHGEF25Q86VW2 580 aa14.09□□□□□ -0.15
VPS9D1-206ENST00000567379 PXDNQ92626 1479 aa14.09□□□□□ -0.15
VPS9D1-206ENST00000567379 KDRP35968 1356 aa14.09□□□□□ -0.15
VPS9D1-206ENST00000567379 CT47B1P0C2W7 299 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-206ENST00000567379 DDX17Q92841 729 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-206ENST00000567379 LTV1Q96GA3 475 aaPredicted RBP14.08□□□□□ -0.16
VPS9D1-206ENST00000567379 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
VPS9D1-206ENST00000567379 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
VPS9D1-206ENST00000567379 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
VPS9D1-206ENST00000567379 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
VPS9D1-206ENST00000567379 GNAI1P63096 354 aa14.06□□□□□ -0.16
VPS9D1-206ENST00000567379 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
VPS9D1-206ENST00000567379 PLIN1O60240 522 aa14.05□□□□□ -0.16
VPS9D1-206ENST00000567379 TSR2Q969E8 191 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-206ENST00000567379 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
VPS9D1-206ENST00000567379 RXRBP28702 533 aa14.04□□□□□ -0.16
VPS9D1-206ENST00000567379 EXOSC9Q06265 439 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-206ENST00000567379 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-206ENST00000567379 LAS1LQ9Y4W2 734 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-206ENST00000567379 RARSP54136 660 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-206ENST00000567379 SOS2Q07890 1332 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-206ENST00000567379 SPATA31A6Q5VVP1 1343 aa14.03□□□□□ -0.16
VPS9D1-206ENST00000567379 LRP6O75581 1613 aa14.03□□□□□ -0.16
VPS9D1-206ENST00000567379 HTATSF1O43719 755 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 BCAR3O75815 825 aa14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 MTHFSDQ2M296 383 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 RTF1Q92541 710 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-206ENST00000567379 ABCC6O95255 1503 aa14.01□□□□□ -0.17
VPS9D1-206ENST00000567379 ZNF853P0CG23 659 aa14.01□□□□□ -0.17
VPS9D1-206ENST00000567379 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
VPS9D1-206ENST00000567379 CCDC136Q96JN2 1154 aa14.01□□□□□ -0.17
VPS9D1-206ENST00000567379 CFAP44Q96MT7 982 aa14.01□□□□□ -0.17
VPS9D1-206ENST00000567379 CRYBG1Q9Y4K1 1723 aa14.01□□□□□ -0.17
VPS9D1-206ENST00000567379 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms