RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
PDXDC1-214ENST00000566633 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.16
PDXDC1-214ENST00000566633 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.16
PDXDC1-214ENST00000566633 USP31Q70CQ4 1352 aa14.02□□□□□ -0.16
PDXDC1-214ENST00000566633 MS4A1P11836 297 aa14.02□□□□□ -0.17
PDXDC1-214ENST00000566633 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
PDXDC1-214ENST00000566633 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.17
PDXDC1-214ENST00000566633 MAPK8IP3Q9UPT6 1336 aa14.02□□□□□ -0.17
PDXDC1-214ENST00000566633 MSH6P52701 1360 aa14.01□□□□□ -0.17
PDXDC1-214ENST00000566633 TMPOP42166 694 aaKnown RBP14.01□□□□□ -0.17
PDXDC1-214ENST00000566633 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-214ENST00000566633 MST1RQ04912 1400 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 KDM2BQ8NHM5 1336 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 FCHSD2O94868 740 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 PIK3C2AO00443 1686 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 BCAR3O75815 825 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 RIPK4P57078 832 aa14□□□□□ -0.17
PDXDC1-214ENST00000566633 ERICH6Q7L0X2 663 aa13.99□□□□□ -0.17
PDXDC1-214ENST00000566633 PDE4AP27815 886 aa13.99□□□□□ -0.17
PDXDC1-214ENST00000566633 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
PDXDC1-214ENST00000566633 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
PDXDC1-214ENST00000566633 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
PDXDC1-214ENST00000566633 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
PDXDC1-214ENST00000566633 ANP32AP39687 249 aaKnown RBP13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 WDR63Q8IWG1 891 aa13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 CABLES1Q8TDN4 633 aa13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 BACH2Q9BYV9 841 aa13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 GCP02774 474 aa13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 HOXC9P31274 260 aa13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
PDXDC1-214ENST00000566633 BRINP3Q76B58 766 aa13.96□□□□□ -0.17
PDXDC1-214ENST00000566633 SLAIN2Q9P270 581 aa13.96□□□□□ -0.17
PDXDC1-214ENST00000566633 ZC3H6P61129 1189 aaKnown RBP13.96□□□□□ -0.17
PDXDC1-214ENST00000566633 IPO9Q96P70 1041 aaKnown RBP13.96□□□□□ -0.17
PDXDC1-214ENST00000566633 NEFMP07197 916 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 EYA1Q99502 592 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 SBNO1A3KN83 1393 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 FLT4P35916 1363 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 USHBP1Q8N6Y0 703 aa13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
PDXDC1-214ENST00000566633 FAM83GA6ND36 823 aa13.94□□□□□ -0.18
PDXDC1-214ENST00000566633 PNNQ9H307 717 aaKnown RBP13.94□□□□□ -0.18
PDXDC1-214ENST00000566633 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
PDXDC1-214ENST00000566633 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
PDXDC1-214ENST00000566633 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
PDXDC1-214ENST00000566633 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-214ENST00000566633 DCCP43146 1447 aa13.92□□□□□ -0.18
PDXDC1-214ENST00000566633 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
PDXDC1-214ENST00000566633 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
PDXDC1-214ENST00000566633 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
PDXDC1-214ENST00000566633 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-214ENST00000566633 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
PDXDC1-214ENST00000566633 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-214ENST00000566633 IP6K1Q92551 441 aa13.9□□□□□ -0.18
PDXDC1-214ENST00000566633 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
PDXDC1-214ENST00000566633 ARHGEF25Q86VW2 580 aa13.9□□□□□ -0.18
PDXDC1-214ENST00000566633 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
PDXDC1-214ENST00000566633 MARF1Q9Y4F3 1742 aaKnown RBP13.89□□□□□ -0.19
PDXDC1-214ENST00000566633 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
PDXDC1-214ENST00000566633 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
PDXDC1-214ENST00000566633 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 MYH16Q9H6N6 1097 aa13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 MCM10Q7L590 875 aa13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 PANK1Q8TE04 598 aa13.88□□□□□ -0.19
PDXDC1-214ENST00000566633 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-214ENST00000566633 SPATA31A3Q5VYP0 1347 aa13.87□□□□□ -0.19
PDXDC1-214ENST00000566633 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
PDXDC1-214ENST00000566633 EXOSC9Q06265 439 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-214ENST00000566633 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-214ENST00000566633 USP19O94966 1318 aa13.87□□□□□ -0.19
PDXDC1-214ENST00000566633 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
PDXDC1-214ENST00000566633 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
PDXDC1-214ENST00000566633 NFAT5O94916 1531 aa13.86□□□□□ -0.19
PDXDC1-214ENST00000566633 IGHDP01880 384 aa13.86□□□□□ -0.19
PDXDC1-214ENST00000566633 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
PDXDC1-214ENST00000566633 ELL2O00472 640 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-214ENST00000566633 ANKRD24Q8TF21 1146 aa13.85□□□□□ -0.19
PDXDC1-214ENST00000566633 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
PDXDC1-214ENST00000566633 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-214ENST00000566633 PXDNQ92626 1479 aa13.84□□□□□ -0.19
PDXDC1-214ENST00000566633 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
PDXDC1-214ENST00000566633 AAMPQ13685 434 aa13.83□□□□□ -0.19
PDXDC1-214ENST00000566633 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.19
PDXDC1-214ENST00000566633 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
PDXDC1-214ENST00000566633 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
PDXDC1-214ENST00000566633 KIF24Q5T7B8 1368 aa13.83□□□□□ -0.2
PDXDC1-214ENST00000566633 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
PDXDC1-214ENST00000566633 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.2
PDXDC1-214ENST00000566633 RLBP1P12271 317 aa13.82□□□□□ -0.2
PDXDC1-214ENST00000566633 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms