RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 AMPHP49418 695 aa14.84□□□□□ -0.03
LINC00562-201ENST00000566385 B4GALNT3Q6L9W6 998 aa14.84□□□□□ -0.03
LINC00562-201ENST00000566385 LMOD2Q6P5Q4 547 aa14.84□□□□□ -0.03
LINC00562-201ENST00000566385 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 FLT4P35916 1363 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 TSR2Q969E8 191 aaKnown RBP14.83□□□□□ -0.04
LINC00562-201ENST00000566385 USP54Q70EL1 1684 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 BCAR3O75815 825 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 C20orf194Q5TEA3 1177 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 PNNQ9H307 717 aaKnown RBP14.83□□□□□ -0.04
LINC00562-201ENST00000566385 PPP4R2Q9NY27 417 aa14.83□□□□□ -0.04
LINC00562-201ENST00000566385 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
LINC00562-201ENST00000566385 THUMPD2Q9BTF0 503 aaKnown RBP14.82□□□□□ -0.04
LINC00562-201ENST00000566385 HOXC9P31274 260 aa14.82□□□□□ -0.04
LINC00562-201ENST00000566385 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
LINC00562-201ENST00000566385 EXOC6Q8TAG9 804 aa14.82□□□□□ -0.04
LINC00562-201ENST00000566385 RGPD1P0DJD0 1748 aa14.82□□□□□ -0.04
LINC00562-201ENST00000566385 DLG5Q8TDM6 1919 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
LINC00562-201ENST00000566385 LTN1O94822 1766 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 NFE2L2Q16236 605 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 CADPS2Q86UW7 1296 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 EYA1Q99502 592 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 NCOA3Q9Y6Q9 1424 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 DCCP43146 1447 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 NEFMP07197 916 aa14.8□□□□□ -0.04
LINC00562-201ENST00000566385 LTV1Q96GA3 475 aaPredicted RBP14.8□□□□□ -0.04
LINC00562-201ENST00000566385 MSH6P52701 1360 aa14.79□□□□□ -0.04
LINC00562-201ENST00000566385 NFAT5O94916 1531 aa14.79□□□□□ -0.04
LINC00562-201ENST00000566385 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
LINC00562-201ENST00000566385 FANCIQ9NVI1 1328 aa14.78□□□□□ -0.04
LINC00562-201ENST00000566385 GCP02774 474 aa14.78□□□□□ -0.04
LINC00562-201ENST00000566385 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
LINC00562-201ENST00000566385 KIF1AQ12756 1690 aa14.78□□□□□ -0.04
LINC00562-201ENST00000566385 MYH16Q9H6N6 1097 aa14.76□□□□□ -0.05
LINC00562-201ENST00000566385 BCL2L13Q9BXK5 485 aa14.76□□□□□ -0.05
LINC00562-201ENST00000566385 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
LINC00562-201ENST00000566385 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
LINC00562-201ENST00000566385 CRBNQ96SW2 442 aa14.75□□□□□ -0.05
LINC00562-201ENST00000566385 LAS1LQ9Y4W2 734 aaKnown RBP14.75□□□□□ -0.05
LINC00562-201ENST00000566385 RARSP54136 660 aaKnown RBP14.75□□□□□ -0.05
LINC00562-201ENST00000566385 USHBP1Q8N6Y0 703 aa14.75□□□□□ -0.05
LINC00562-201ENST00000566385 ALS2Q96Q42 1657 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 BRINP3Q76B58 766 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 KCNH5Q8NCM2 988 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 IP6K1Q92551 441 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 KDRP35968 1356 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 CABLES1Q8TDN4 633 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
LINC00562-201ENST00000566385 ARHGEF25Q86VW2 580 aa14.73□□□□□ -0.05
LINC00562-201ENST00000566385 AXIN2Q9Y2T1 843 aa14.73□□□□□ -0.05
LINC00562-201ENST00000566385 IL16Q14005 1332 aa14.73□□□□□ -0.05
LINC00562-201ENST00000566385 MTHFSDQ2M296 383 aaKnown RBP14.73□□□□□ -0.05
LINC00562-201ENST00000566385 USP19O94966 1318 aa14.73□□□□□ -0.05
LINC00562-201ENST00000566385 SLIT3O75094 1523 aa14.73□□□□□ -0.05
LINC00562-201ENST00000566385 MED1Q15648 1581 aaPredicted RBP14.73□□□□□ -0.05
LINC00562-201ENST00000566385 ZC3H6P61129 1189 aaKnown RBP14.72□□□□□ -0.05
LINC00562-201ENST00000566385 MCM10Q7L590 875 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 SLAIN2Q9P270 581 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 NPHP3Q7Z494 1330 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 RGPD2P0DJD1 1756 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 NBPF6Q5VWK0 638 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 LRRC59Q96AG4 307 aaKnown RBP14.72□□□□□ -0.05
LINC00562-201ENST00000566385 NBPF4Q96M43 638 aa14.72□□□□□ -0.05
LINC00562-201ENST00000566385 FRAT1Q92837 279 aaPredicted RBP14.71□□□□□ -0.05
LINC00562-201ENST00000566385 TNNQ9UQP3 1299 aa14.71□□□□□ -0.05
LINC00562-201ENST00000566385 PXDNQ92626 1479 aa14.71□□□□□ -0.05
LINC00562-201ENST00000566385 RTL1A6NKG5 1358 aa14.71□□□□□ -0.05
LINC00562-201ENST00000566385 RGPD5Q99666 1765 aa14.69□□□□□ -0.06
LINC00562-201ENST00000566385 ZNF853P0CG23 659 aa14.69□□□□□ -0.06
LINC00562-201ENST00000566385 MBIPQ9NS73 344 aa14.69□□□□□ -0.06
LINC00562-201ENST00000566385 PHRF1Q9P1Y6 1649 aaKnown RBP14.69□□□□□ -0.06
LINC00562-201ENST00000566385 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
LINC00562-201ENST00000566385 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.69□□□□□ -0.06
LINC00562-201ENST00000566385 SPATA31A3Q5VYP0 1347 aa14.68□□□□□ -0.06
LINC00562-201ENST00000566385 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
LINC00562-201ENST00000566385 PANK1Q8TE04 598 aa14.68□□□□□ -0.06
LINC00562-201ENST00000566385 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
LINC00562-201ENST00000566385 SSH1Q8WYL5 1049 aa14.67□□□□□ -0.06
LINC00562-201ENST00000566385 CFAP44Q96MT7 982 aa14.67□□□□□ -0.06
LINC00562-201ENST00000566385 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
LINC00562-201ENST00000566385 TNS3Q68CZ2 1445 aa14.67□□□□□ -0.06
LINC00562-201ENST00000566385 GNAI1P63096 354 aa14.66□□□□□ -0.06
LINC00562-201ENST00000566385 RLBP1P12271 317 aa14.66□□□□□ -0.06
LINC00562-201ENST00000566385 CANXP27824 592 aaKnown RBP14.66□□□□□ -0.06
LINC00562-201ENST00000566385 ANKRD24Q8TF21 1146 aa14.66□□□□□ -0.06
LINC00562-201ENST00000566385 CLUAP1Q96AJ1 413 aa14.66□□□□□ -0.06
LINC00562-201ENST00000566385 MIS18AQ9NYP9 233 aa14.66□□□□□ -0.06
LINC00562-201ENST00000566385 CHRNA2Q15822 529 aa14.65□□□□□ -0.06
LINC00562-201ENST00000566385 KRT24Q2M2I5 525 aa14.65□□□□□ -0.06
LINC00562-201ENST00000566385 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
LINC00562-201ENST00000566385 C8orf58Q8NAV2 365 aa14.65□□□□□ -0.06
LINC00562-201ENST00000566385 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
LINC00562-201ENST00000566385 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
LINC00562-201ENST00000566385 TCERG1O14776 1098 aaKnown RBP14.64□□□□□ -0.07
LINC00562-201ENST00000566385 VAMP4O75379 141 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms