RNA–Protein interactions for RNA: ENST00000564448.5

CNGB1-204, Transcript of cyclic nucleotide gated channel beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGB1, Length 4,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGB1-204ENST00000564448 PDCL3Q9H2J4 239 aa13.82□□□□□ -0.2
CNGB1-204ENST00000564448 KIF3AQ9Y496 699 aa13.82□□□□□ -0.2
CNGB1-204ENST00000564448 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
CNGB1-204ENST00000564448 ZC3H6P61129 1189 aaKnown RBP13.82□□□□□ -0.2
CNGB1-204ENST00000564448 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
CNGB1-204ENST00000564448 MVPQ14764 893 aaKnown RBP13.82□□□□□ -0.2
CNGB1-204ENST00000564448 NOS1P29475 1434 aa13.81□□□□□ -0.2
CNGB1-204ENST00000564448 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
CNGB1-204ENST00000564448 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
CNGB1-204ENST00000564448 IGHDP01880 384 aa13.8□□□□□ -0.2
CNGB1-204ENST00000564448 TNPO1Q92973 898 aaKnown RBP13.8□□□□□ -0.2
CNGB1-204ENST00000564448 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
CNGB1-204ENST00000564448 SAMD9Q5K651 1589 aa13.8□□□□□ -0.2
CNGB1-204ENST00000564448 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
CNGB1-204ENST00000564448 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
CNGB1-204ENST00000564448 GPS2Q13227 327 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 SSFA2P28290 1259 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
CNGB1-204ENST00000564448 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
CNGB1-204ENST00000564448 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 PDE4CQ08493 712 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 NGLY1Q96IV0 654 aa13.79□□□□□ -0.2
CNGB1-204ENST00000564448 GNAI1P63096 354 aa13.78□□□□□ -0.2
CNGB1-204ENST00000564448 RASSF8Q8NHQ8 419 aa13.78□□□□□ -0.2
CNGB1-204ENST00000564448 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
CNGB1-204ENST00000564448 RRS1Q15050 365 aaKnown RBP13.78□□□□□ -0.2
CNGB1-204ENST00000564448 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
CNGB1-204ENST00000564448 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
CNGB1-204ENST00000564448 SDF4Q9BRK5 362 aa13.78□□□□□ -0.2
CNGB1-204ENST00000564448 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.2
CNGB1-204ENST00000564448 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.2
CNGB1-204ENST00000564448 ABCA8O94911 1581 aa13.77□□□□□ -0.2
CNGB1-204ENST00000564448 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.2
CNGB1-204ENST00000564448 CLCN1P35523 988 aa13.77□□□□□ -0.21
CNGB1-204ENST00000564448 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.21
CNGB1-204ENST00000564448 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
CNGB1-204ENST00000564448 RIMS2Q9UQ26 1411 aa13.77□□□□□ -0.21
CNGB1-204ENST00000564448 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.21
CNGB1-204ENST00000564448 CCDC66A2RUB6 948 aa13.76□□□□□ -0.21
CNGB1-204ENST00000564448 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
CNGB1-204ENST00000564448 CEBPZQ03701 1054 aaKnown RBP13.76□□□□□ -0.21
CNGB1-204ENST00000564448 TATP17735 454 aaPredicted RBP13.76□□□□□ -0.21
CNGB1-204ENST00000564448 C9orf78Q9NZ63 289 aaPredicted RBP13.76□□□□□ -0.21
CNGB1-204ENST00000564448 ERICH4A6NGS2 130 aa13.76□□□□□ -0.21
CNGB1-204ENST00000564448 DUSP27Q5VZP5 1158 aa13.76□□□□□ -0.21
CNGB1-204ENST00000564448 CCDC73Q6ZRK6 1079 aa13.76□□□□□ -0.21
CNGB1-204ENST00000564448 ARGLU1Q9NWB6 273 aaPredicted RBP13.76□□□□□ -0.21
CNGB1-204ENST00000564448 PDCL2Q8N4E4 241 aa13.76□□□□□ -0.21
CNGB1-204ENST00000564448 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
CNGB1-204ENST00000564448 ATP7AQ04656 1500 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 C19orf44Q9H6X5 657 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 FBLN1P23142 703 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 CCDC112Q8NEF3 446 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 CWC22Q9HCG8 908 aaKnown RBP13.75□□□□□ -0.21
CNGB1-204ENST00000564448 YEATS2Q9ULM3 1422 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 ZFYVE16Q7Z3T8 1539 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 TMEM57Q8N5G2 664 aa13.75□□□□□ -0.21
CNGB1-204ENST00000564448 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
CNGB1-204ENST00000564448 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
CNGB1-204ENST00000564448 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
CNGB1-204ENST00000564448 RRAGDQ9NQL2 400 aaPredicted RBP13.74□□□□□ -0.21
CNGB1-204ENST00000564448 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
CNGB1-204ENST00000564448 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.74□□□□□ -0.21
CNGB1-204ENST00000564448 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
CNGB1-204ENST00000564448 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
CNGB1-204ENST00000564448 TWISTNBQ3B726 338 aaPredicted RBP13.73□□□□□ -0.21
CNGB1-204ENST00000564448 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
CNGB1-204ENST00000564448 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
CNGB1-204ENST00000564448 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
CNGB1-204ENST00000564448 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
CNGB1-204ENST00000564448 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
CNGB1-204ENST00000564448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
CNGB1-204ENST00000564448 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 CPLX1O14810 134 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 TBC1D32Q96NH3 1257 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 TSPYL4Q9UJ04 414 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 ERC2O15083 957 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 FILIP1Q7Z7B0 1213 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
CNGB1-204ENST00000564448 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
CNGB1-204ENST00000564448 RNF20Q5VTR2 975 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 NPHP3Q7Z494 1330 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 KCNA6P17658 529 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 PDILTQ8N807 584 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 TSPOAP1O95153 1857 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
CNGB1-204ENST00000564448 SEC24BO95487 1268 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 MCM2P49736 904 aa13.71□□□□□ -0.21
CNGB1-204ENST00000564448 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.21
CNGB1-204ENST00000564448 CCDC192P0DO97 292 aa13.71□□□□□ -0.22
CNGB1-204ENST00000564448 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.22
CNGB1-204ENST00000564448 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
CNGB1-204ENST00000564448 WDR63Q8IWG1 891 aa13.7□□□□□ -0.22
CNGB1-204ENST00000564448 USP25Q9UHP3 1055 aa13.7□□□□□ -0.22
CNGB1-204ENST00000564448 LETM1O95202 739 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms