RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RLBP1P12271 317 aa24.68■■□□□ 1.54
SMPD3-203ENST00000563226 HSP90AB2PQ58FF8 381 aa24.68■■□□□ 1.54
SMPD3-203ENST00000563226 RGPD1P0DJD0 1748 aa24.68■■□□□ 1.54
SMPD3-203ENST00000563226 AEBP1Q8IUX7 1158 aa24.68■■□□□ 1.54
SMPD3-203ENST00000563226 NPHP4O75161 1426 aaPredicted RBP24.67■■□□□ 1.54
SMPD3-203ENST00000563226 CT47B1P0C2W7 299 aaPredicted RBP24.67■■□□□ 1.54
SMPD3-203ENST00000563226 CENPQQ7L2Z9 268 aaPredicted RBP24.67■■□□□ 1.54
SMPD3-203ENST00000563226 TCERG1O14776 1098 aaKnown RBP24.66■■□□□ 1.54
SMPD3-203ENST00000563226 MAP3K19Q56UN5 1328 aa24.66■■□□□ 1.54
SMPD3-203ENST00000563226 SULT6B1Q6IMI4 303 aa24.63■■□□□ 1.53
SMPD3-203ENST00000563226 SSH1Q8WYL5 1049 aa24.63■■□□□ 1.53
SMPD3-203ENST00000563226 LAS1LQ9Y4W2 734 aaKnown RBP24.63■■□□□ 1.53
SMPD3-203ENST00000563226 CLUAP1Q96AJ1 413 aa24.63■■□□□ 1.53
SMPD3-203ENST00000563226 SMC4Q9NTJ3 1288 aa24.62■■□□□ 1.53
SMPD3-203ENST00000563226 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
SMPD3-203ENST00000563226 NUTM2GQ5VZR2 741 aa24.61■■□□□ 1.53
SMPD3-203ENST00000563226 USP54Q70EL1 1684 aa24.61■■□□□ 1.53
SMPD3-203ENST00000563226 NLRP6P59044 892 aa24.6■■□□□ 1.53
SMPD3-203ENST00000563226 SBNO1A3KN83 1393 aa24.6■■□□□ 1.53
SMPD3-203ENST00000563226 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
SMPD3-203ENST00000563226 PHF8Q9UPP1 1060 aa24.59■■□□□ 1.53
SMPD3-203ENST00000563226 FLT4P35916 1363 aa24.59■■□□□ 1.53
SMPD3-203ENST00000563226 IGHDP01880 384 aa24.58■■□□□ 1.53
SMPD3-203ENST00000563226 ZKSCAN2Q63HK3 967 aa24.58■■□□□ 1.53
SMPD3-203ENST00000563226 MSH5O43196 834 aa24.58■■□□□ 1.53
SMPD3-203ENST00000563226 MS4A1P11836 297 aa24.57■■□□□ 1.52
SMPD3-203ENST00000563226 DCTN1Q14203 1278 aa24.57■■□□□ 1.52
SMPD3-203ENST00000563226 ZNF853P0CG23 659 aa24.57■■□□□ 1.52
SMPD3-203ENST00000563226 PAK3O75914 559 aaPredicted RBP24.56■■□□□ 1.52
SMPD3-203ENST00000563226 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
SMPD3-203ENST00000563226 NWD1Q149M9 1564 aa24.56■■□□□ 1.52
SMPD3-203ENST00000563226 CALD1Q05682 793 aaKnown RBP24.55■■□□□ 1.52
SMPD3-203ENST00000563226 LMOD3Q0VAK6 560 aa24.55■■□□□ 1.52
SMPD3-203ENST00000563226 ABTB2Q8N961 1025 aa24.55■■□□□ 1.52
SMPD3-203ENST00000563226 MBIPQ9NS73 344 aa24.55■■□□□ 1.52
SMPD3-203ENST00000563226 ARHGEF10O15013 1369 aa24.55■■□□□ 1.52
SMPD3-203ENST00000563226 TRIM27P14373 513 aa24.54■■□□□ 1.52
SMPD3-203ENST00000563226 PDE4AP27815 886 aa24.54■■□□□ 1.52
SMPD3-203ENST00000563226 AMPHP49418 695 aa24.54■■□□□ 1.52
SMPD3-203ENST00000563226 GNAI1P63096 354 aa24.54■■□□□ 1.52
SMPD3-203ENST00000563226 DZIP1LQ8IYY4 767 aaKnown RBP24.54■■□□□ 1.52
SMPD3-203ENST00000563226 NOB1Q9ULX3 412 aaKnown RBP24.54■■□□□ 1.52
SMPD3-203ENST00000563226 MVPQ14764 893 aaKnown RBP24.53■■□□□ 1.52
SMPD3-203ENST00000563226 FTSJ3Q8IY81 847 aaKnown RBP24.52■■□□□ 1.52
SMPD3-203ENST00000563226 TSPYL6Q8N831 410 aa24.52■■□□□ 1.52
SMPD3-203ENST00000563226 PCDHB15Q9Y5E8 787 aa24.52■■□□□ 1.52
SMPD3-203ENST00000563226 ESCO1Q5FWF5 840 aa24.51■■□□□ 1.51
SMPD3-203ENST00000563226 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
SMPD3-203ENST00000563226 ATF7IPQ6VMQ6 1270 aa24.5■■□□□ 1.51
SMPD3-203ENST00000563226 C14orf37Q86TY3 774 aa24.5■■□□□ 1.51
SMPD3-203ENST00000563226 CFAP44Q96MT7 982 aa24.5■■□□□ 1.51
SMPD3-203ENST00000563226 BACH2Q9BYV9 841 aa24.5■■□□□ 1.51
SMPD3-203ENST00000563226 VAMP4O75379 141 aa24.49■■□□□ 1.51
SMPD3-203ENST00000563226 EYA1Q99502 592 aa24.49■■□□□ 1.51
SMPD3-203ENST00000563226 LTN1O94822 1766 aa24.49■■□□□ 1.51
SMPD3-203ENST00000563226 HOXC9P31274 260 aa24.48■■□□□ 1.51
SMPD3-203ENST00000563226 IGSF1Q8N6C5 1336 aa24.48■■□□□ 1.51
SMPD3-203ENST00000563226 KDRP35968 1356 aa24.48■■□□□ 1.51
SMPD3-203ENST00000563226 ELL2O00472 640 aaPredicted RBP24.47■■□□□ 1.51
SMPD3-203ENST00000563226 AAMPQ13685 434 aa24.47■■□□□ 1.51
SMPD3-203ENST00000563226 KIF16BQ96L93 1317 aa24.47■■□□□ 1.51
SMPD3-203ENST00000563226 MCM10Q7L590 875 aa24.47■■□□□ 1.51
SMPD3-203ENST00000563226 RGS3P49796 1198 aa24.46■■□□□ 1.51
SMPD3-203ENST00000563226 C8orf58Q8NAV2 365 aa24.46■■□□□ 1.51
SMPD3-203ENST00000563226 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
SMPD3-203ENST00000563226 FOXO3O43524 673 aa24.45■■□□□ 1.5
SMPD3-203ENST00000563226 NFAT5O94916 1531 aa24.44■■□□□ 1.5
SMPD3-203ENST00000563226 PSME1Q06323 249 aa24.44■■□□□ 1.5
SMPD3-203ENST00000563226 KIF24Q5T7B8 1368 aa24.44■■□□□ 1.5
SMPD3-203ENST00000563226 TMEM57Q8N5G2 664 aa24.44■■□□□ 1.5
SMPD3-203ENST00000563226 ZNF428Q96B54 188 aa24.44■■□□□ 1.5
SMPD3-203ENST00000563226 MTHFSDQ2M296 383 aaKnown RBP24.44■■□□□ 1.5
SMPD3-203ENST00000563226 ITPRIPQ8IWB1 547 aa24.44■■□□□ 1.5
SMPD3-203ENST00000563226 MRPL50Q8N5N7 158 aaKnown RBP24.44■■□□□ 1.5
SMPD3-203ENST00000563226 TWISTNBQ3B726 338 aaPredicted RBP24.43■■□□□ 1.5
SMPD3-203ENST00000563226 BRPF1P55201 1214 aaPredicted RBP24.42■■□□□ 1.5
SMPD3-203ENST00000563226 PROSER2Q86WR7 435 aaPredicted RBP24.42■■□□□ 1.5
SMPD3-203ENST00000563226 IPO8O15397 1037 aaKnown RBP24.41■■□□□ 1.5
SMPD3-203ENST00000563226 XPCQ01831 940 aaPredicted RBP24.41■■□□□ 1.5
SMPD3-203ENST00000563226 LTV1Q96GA3 475 aaPredicted RBP24.41■■□□□ 1.5
SMPD3-203ENST00000563226 STRCP1A6NGW2 1772 aa24.4■■□□□ 1.5
SMPD3-203ENST00000563226 CRB1P82279 1406 aa24.4■■□□□ 1.5
SMPD3-203ENST00000563226 DDX19BQ9UMR2 479 aa24.39■■□□□ 1.5
SMPD3-203ENST00000563226 KRT24Q2M2I5 525 aa24.39■■□□□ 1.49
SMPD3-203ENST00000563226 CHL1O00533 1208 aa24.38■■□□□ 1.49
SMPD3-203ENST00000563226 RTL1A6NKG5 1358 aa24.38■■□□□ 1.49
SMPD3-203ENST00000563226 TRPM3Q9HCF6 1732 aaPredicted RBP24.37■■□□□ 1.49
SMPD3-203ENST00000563226 ANP32AP39687 249 aaKnown RBP24.36■■□□□ 1.49
SMPD3-203ENST00000563226 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
SMPD3-203ENST00000563226 C1orf167Q5SNV9 1468 aa24.35■■□□□ 1.49
SMPD3-203ENST00000563226 C8orf34Q49A92 452 aa24.35■■□□□ 1.49
SMPD3-203ENST00000563226 RWDD1Q9H446 243 aaPredicted RBP24.35■■□□□ 1.49
SMPD3-203ENST00000563226 USHBP1Q8N6Y0 703 aa24.34■■□□□ 1.49
SMPD3-203ENST00000563226 IP6K1Q92551 441 aa24.34■■□□□ 1.49
SMPD3-203ENST00000563226 ZBTB40Q9NUA8 1239 aa24.34■■□□□ 1.49
SMPD3-203ENST00000563226 RGPD2P0DJD1 1756 aa24.33■■□□□ 1.49
SMPD3-203ENST00000563226 GAS2L2Q8NHY3 880 aa24.33■■□□□ 1.49
SMPD3-203ENST00000563226 MIS18AQ9NYP9 233 aa24.33■■□□□ 1.49
SMPD3-203ENST00000563226 LRRC37A3O60309 1634 aa24.33■■□□□ 1.48
SMPD3-203ENST00000563226 PHRF1Q9P1Y6 1649 aaKnown RBP24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms