RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GPATCH3Q96I76 525 aa13.21□□□□□ -0.29
CARMIL3-202ENST00000559694 NSD2O96028 1365 aa13.21□□□□□ -0.29
CARMIL3-202ENST00000559694 ABCC11Q96J66 1382 aa13.21□□□□□ -0.29
CARMIL3-202ENST00000559694 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
CARMIL3-202ENST00000559694 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
CARMIL3-202ENST00000559694 METP08581 1390 aa13.2□□□□□ -0.3
CARMIL3-202ENST00000559694 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
CARMIL3-202ENST00000559694 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
CARMIL3-202ENST00000559694 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
CARMIL3-202ENST00000559694 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
CARMIL3-202ENST00000559694 BCAR3O75815 825 aa13.18□□□□□ -0.3
CARMIL3-202ENST00000559694 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
CARMIL3-202ENST00000559694 ERVK-7P63135 1459 aa13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 TMEM94Q12767 1356 aa13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 KIF6Q6ZMV9 814 aa13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 UNC13BO14795 1591 aa13.17□□□□□ -0.3
CARMIL3-202ENST00000559694 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
CARMIL3-202ENST00000559694 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
CARMIL3-202ENST00000559694 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
CARMIL3-202ENST00000559694 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
CARMIL3-202ENST00000559694 TRPM2O94759 1503 aa13.16□□□□□ -0.3
CARMIL3-202ENST00000559694 NPHP4O75161 1426 aaPredicted RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 MCCP23508 829 aa13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 PRDM15P57071 1507 aaPredicted RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 PLEKHG1Q9ULL1 1385 aa13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
CARMIL3-202ENST00000559694 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.31
CARMIL3-202ENST00000559694 KAT6BQ8WYB5 2073 aa13.15□□□□□ -0.31
CARMIL3-202ENST00000559694 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.31
CARMIL3-202ENST00000559694 ABCC3O15438 1527 aa13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 STARD3NLO95772 234 aa13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
CARMIL3-202ENST00000559694 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 PTPRTO14522 1441 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 GNAI3P08754 354 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 BRPF3Q9ULD4 1205 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 PLA2R1Q13018 1463 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 KDM5CP41229 1560 aa13.13□□□□□ -0.31
CARMIL3-202ENST00000559694 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
CARMIL3-202ENST00000559694 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
CARMIL3-202ENST00000559694 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
CARMIL3-202ENST00000559694 IFIT2P09913 472 aaKnown RBP13.12□□□□□ -0.31
CARMIL3-202ENST00000559694 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
CARMIL3-202ENST00000559694 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
CARMIL3-202ENST00000559694 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 EYA1Q99502 592 aa13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 DDB1Q16531 1140 aa13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
CARMIL3-202ENST00000559694 FLT4P35916 1363 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 IP6K1Q92551 441 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 ASXL1Q8IXJ9 1541 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 HOXC9P31274 260 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
CARMIL3-202ENST00000559694 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
CARMIL3-202ENST00000559694 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
CARMIL3-202ENST00000559694 ACSBG1Q96GR2 724 aa13.09□□□□□ -0.31
CARMIL3-202ENST00000559694 LNPKQ9C0E8 428 aa13.09□□□□□ -0.31
CARMIL3-202ENST00000559694 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
CARMIL3-202ENST00000559694 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
CARMIL3-202ENST00000559694 IL2RBP14784 551 aa13.08□□□□□ -0.32
CARMIL3-202ENST00000559694 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
CARMIL3-202ENST00000559694 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
CARMIL3-202ENST00000559694 COL17A1Q9UMD9 1497 aaPredicted RBP13.08□□□□□ -0.32
CARMIL3-202ENST00000559694 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
CARMIL3-202ENST00000559694 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
CARMIL3-202ENST00000559694 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
CARMIL3-202ENST00000559694 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
CARMIL3-202ENST00000559694 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
CARMIL3-202ENST00000559694 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
CARMIL3-202ENST00000559694 SLC39A6Q13433 755 aa13.06□□□□□ -0.32
CARMIL3-202ENST00000559694 GNAI2P04899 355 aa13.06□□□□□ -0.32
CARMIL3-202ENST00000559694 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
CARMIL3-202ENST00000559694 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms