RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
CPNE6-210ENST00000558995 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
CPNE6-210ENST00000558995 SLIT1O75093 1534 aa17.03■□□□□ 0.32
CPNE6-210ENST00000558995 RIPK4P57078 832 aa17.03■□□□□ 0.32
CPNE6-210ENST00000558995 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
CPNE6-210ENST00000558995 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
CPNE6-210ENST00000558995 VIRMAQ69YN4 1812 aaKnown RBP17.02■□□□□ 0.32
CPNE6-210ENST00000558995 KIF20BQ96Q89 1820 aa17.02■□□□□ 0.32
CPNE6-210ENST00000558995 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.02■□□□□ 0.31
CPNE6-210ENST00000558995 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
CPNE6-210ENST00000558995 FCHSD2O94868 740 aa17.01■□□□□ 0.31
CPNE6-210ENST00000558995 TRIM27P14373 513 aa17.01■□□□□ 0.31
CPNE6-210ENST00000558995 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
CPNE6-210ENST00000558995 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
CPNE6-210ENST00000558995 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
CPNE6-210ENST00000558995 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
CPNE6-210ENST00000558995 CDC42BPGQ6DT37 1551 aa16.99■□□□□ 0.31
CPNE6-210ENST00000558995 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
CPNE6-210ENST00000558995 BECN1Q14457 450 aa16.99■□□□□ 0.31
CPNE6-210ENST00000558995 TBX22Q9Y458 520 aa16.99■□□□□ 0.31
CPNE6-210ENST00000558995 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
CPNE6-210ENST00000558995 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
CPNE6-210ENST00000558995 GSE1Q14687 1217 aa16.97■□□□□ 0.31
CPNE6-210ENST00000558995 ACEP12821 1306 aa16.96■□□□□ 0.31
CPNE6-210ENST00000558995 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
CPNE6-210ENST00000558995 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
CPNE6-210ENST00000558995 ITPRIPQ8IWB1 547 aa16.96■□□□□ 0.31
CPNE6-210ENST00000558995 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
CPNE6-210ENST00000558995 COG3Q96JB2 828 aa16.96■□□□□ 0.31
CPNE6-210ENST00000558995 TBC1D32Q96NH3 1257 aa16.96■□□□□ 0.31
CPNE6-210ENST00000558995 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
CPNE6-210ENST00000558995 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
CPNE6-210ENST00000558995 PRKAR2BP31323 418 aa16.94■□□□□ 0.3
CPNE6-210ENST00000558995 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
CPNE6-210ENST00000558995 MON2Q7Z3U7 1717 aa16.94■□□□□ 0.3
CPNE6-210ENST00000558995 KCNA6P17658 529 aa16.94■□□□□ 0.3
CPNE6-210ENST00000558995 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
CPNE6-210ENST00000558995 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
CPNE6-210ENST00000558995 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
CPNE6-210ENST00000558995 HMOX1P09601 288 aa16.93■□□□□ 0.3
CPNE6-210ENST00000558995 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
CPNE6-210ENST00000558995 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
CPNE6-210ENST00000558995 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
CPNE6-210ENST00000558995 SMC5Q8IY18 1101 aa16.92■□□□□ 0.3
CPNE6-210ENST00000558995 LRRC7Q96NW7 1537 aa16.92■□□□□ 0.3
CPNE6-210ENST00000558995 PLEKHG3A1L390 1219 aa16.92■□□□□ 0.3
CPNE6-210ENST00000558995 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
CPNE6-210ENST00000558995 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
CPNE6-210ENST00000558995 PTCH1Q13635 1447 aa16.91■□□□□ 0.3
CPNE6-210ENST00000558995 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
CPNE6-210ENST00000558995 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
CPNE6-210ENST00000558995 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
CPNE6-210ENST00000558995 BRPF3Q9ULD4 1205 aa16.9■□□□□ 0.3
CPNE6-210ENST00000558995 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
CPNE6-210ENST00000558995 IL13P35225 146 aa16.89■□□□□ 0.3
CPNE6-210ENST00000558995 RBM33Q96EV2 1170 aaKnown RBP16.89■□□□□ 0.29
CPNE6-210ENST00000558995 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
CPNE6-210ENST00000558995 USP6P35125 1406 aa16.89■□□□□ 0.29
CPNE6-210ENST00000558995 SOX12O15370 315 aa16.89■□□□□ 0.29
CPNE6-210ENST00000558995 TOPAZ1Q8N9V7 1692 aa16.88■□□□□ 0.29
CPNE6-210ENST00000558995 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
CPNE6-210ENST00000558995 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
CPNE6-210ENST00000558995 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
CPNE6-210ENST00000558995 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 ARHGAP45Q92619 1136 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 TBC1D2Q9BYX2 928 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 VAMP4O75379 141 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 GNAI1P63096 354 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 ANTXR1Q9H6X2 564 aa16.86■□□□□ 0.29
CPNE6-210ENST00000558995 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
CPNE6-210ENST00000558995 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
CPNE6-210ENST00000558995 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
CPNE6-210ENST00000558995 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
CPNE6-210ENST00000558995 NUCB1Q02818 461 aa16.85■□□□□ 0.29
CPNE6-210ENST00000558995 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
CPNE6-210ENST00000558995 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
CPNE6-210ENST00000558995 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
CPNE6-210ENST00000558995 C22orf23Q9BZE7 217 aa16.84■□□□□ 0.29
CPNE6-210ENST00000558995 SLKQ9H2G2 1235 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-210ENST00000558995 MRPL50Q8N5N7 158 aaKnown RBP16.84■□□□□ 0.29
CPNE6-210ENST00000558995 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
CPNE6-210ENST00000558995 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.29
CPNE6-210ENST00000558995 THUMPD2Q9BTF0 503 aaKnown RBP16.83■□□□□ 0.29
CPNE6-210ENST00000558995 SSH2Q76I76 1423 aa16.83■□□□□ 0.29
CPNE6-210ENST00000558995 ADAMTSL3P82987 1691 aa16.83■□□□□ 0.28
CPNE6-210ENST00000558995 RGPD8O14715 1765 aaPredicted RBP16.83■□□□□ 0.28
CPNE6-210ENST00000558995 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
CPNE6-210ENST00000558995 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
CPNE6-210ENST00000558995 MFAP1P55081 439 aaKnown RBP16.82■□□□□ 0.28
CPNE6-210ENST00000558995 EIF4A2Q14240 407 aaKnown RBP16.81■□□□□ 0.28
CPNE6-210ENST00000558995 HSP90AB2PQ58FF8 381 aa16.81■□□□□ 0.28
CPNE6-210ENST00000558995 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
CPNE6-210ENST00000558995 TSPYL6Q8N831 410 aa16.81■□□□□ 0.28
CPNE6-210ENST00000558995 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
CPNE6-210ENST00000558995 CHD1LQ86WJ1 897 aa16.81■□□□□ 0.28
CPNE6-210ENST00000558995 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
CPNE6-210ENST00000558995 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
CPNE6-210ENST00000558995 GCC1Q96CN9 775 aa16.79■□□□□ 0.28
CPNE6-210ENST00000558995 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms