RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
TPM1-210ENST00000558264 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
TPM1-210ENST00000558264 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
TPM1-210ENST00000558264 DZIP1LQ8IYY4 767 aaKnown RBP13.55□□□□□ -0.24
TPM1-210ENST00000558264 SLIT1O75093 1534 aa13.55□□□□□ -0.24
TPM1-210ENST00000558264 USP6P35125 1406 aa13.54□□□□□ -0.24
TPM1-210ENST00000558264 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
TPM1-210ENST00000558264 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
TPM1-210ENST00000558264 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
TPM1-210ENST00000558264 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
TPM1-210ENST00000558264 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
TPM1-210ENST00000558264 IL16Q14005 1332 aa13.53□□□□□ -0.24
TPM1-210ENST00000558264 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
TPM1-210ENST00000558264 C8orf34Q49A92 452 aa13.52□□□□□ -0.24
TPM1-210ENST00000558264 ATF7IPQ6VMQ6 1270 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
TPM1-210ENST00000558264 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 NBR1Q14596 966 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 TMEM57Q8N5G2 664 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
TPM1-210ENST00000558264 NRKQ7Z2Y5 1582 aa13.5□□□□□ -0.25
TPM1-210ENST00000558264 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
TPM1-210ENST00000558264 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
TPM1-210ENST00000558264 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
TPM1-210ENST00000558264 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
TPM1-210ENST00000558264 RIMS1Q86UR5 1692 aaKnown RBP13.5□□□□□ -0.25
TPM1-210ENST00000558264 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
TPM1-210ENST00000558264 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
TPM1-210ENST00000558264 MCM10Q7L590 875 aa13.49□□□□□ -0.25
TPM1-210ENST00000558264 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
TPM1-210ENST00000558264 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
TPM1-210ENST00000558264 NLRP6P59044 892 aa13.48□□□□□ -0.25
TPM1-210ENST00000558264 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
TPM1-210ENST00000558264 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
TPM1-210ENST00000558264 PEAK1Q9H792 1746 aa13.48□□□□□ -0.25
TPM1-210ENST00000558264 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
TPM1-210ENST00000558264 FOXO3O43524 673 aa13.47□□□□□ -0.25
TPM1-210ENST00000558264 VAMP4O75379 141 aa13.47□□□□□ -0.25
TPM1-210ENST00000558264 GNAI1P63096 354 aa13.47□□□□□ -0.25
TPM1-210ENST00000558264 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
TPM1-210ENST00000558264 SSH2Q76I76 1423 aa13.46□□□□□ -0.25
TPM1-210ENST00000558264 AMPHP49418 695 aa13.46□□□□□ -0.25
TPM1-210ENST00000558264 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.26
TPM1-210ENST00000558264 KIF16BQ96L93 1317 aa13.46□□□□□ -0.26
TPM1-210ENST00000558264 TWISTNBQ3B726 338 aaPredicted RBP13.46□□□□□ -0.26
TPM1-210ENST00000558264 LTV1Q96GA3 475 aaPredicted RBP13.46□□□□□ -0.26
TPM1-210ENST00000558264 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.26
TPM1-210ENST00000558264 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
TPM1-210ENST00000558264 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
TPM1-210ENST00000558264 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
TPM1-210ENST00000558264 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
TPM1-210ENST00000558264 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
TPM1-210ENST00000558264 C1orf115Q9H7X2 142 aa13.45□□□□□ -0.26
TPM1-210ENST00000558264 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
TPM1-210ENST00000558264 SEC24BO95487 1268 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
TPM1-210ENST00000558264 TTC21AQ8NDW8 1320 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
TPM1-210ENST00000558264 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
TPM1-210ENST00000558264 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
TPM1-210ENST00000558264 XPCQ01831 940 aaPredicted RBP13.42□□□□□ -0.26
TPM1-210ENST00000558264 EYA1Q99502 592 aa13.42□□□□□ -0.26
TPM1-210ENST00000558264 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
TPM1-210ENST00000558264 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
TPM1-210ENST00000558264 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
TPM1-210ENST00000558264 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
TPM1-210ENST00000558264 NALCNQ8IZF0 1738 aa13.41□□□□□ -0.26
TPM1-210ENST00000558264 AAMPQ13685 434 aa13.41□□□□□ -0.26
TPM1-210ENST00000558264 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
TPM1-210ENST00000558264 FLT4P35916 1363 aa13.41□□□□□ -0.26
TPM1-210ENST00000558264 ESCO1Q5FWF5 840 aa13.4□□□□□ -0.26
TPM1-210ENST00000558264 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
TPM1-210ENST00000558264 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
TPM1-210ENST00000558264 HOXC9P31274 260 aa13.38□□□□□ -0.27
TPM1-210ENST00000558264 ANKARQ7Z5J8 1434 aa13.37□□□□□ -0.27
TPM1-210ENST00000558264 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
TPM1-210ENST00000558264 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
TPM1-210ENST00000558264 PIK3R4Q99570 1358 aa13.37□□□□□ -0.27
TPM1-210ENST00000558264 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
TPM1-210ENST00000558264 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
TPM1-210ENST00000558264 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
TPM1-210ENST00000558264 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 CHL1O00533 1208 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 PSME1Q06323 249 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 USP19O94966 1318 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
TPM1-210ENST00000558264 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
TPM1-210ENST00000558264 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms