RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 DHX57Q6P158 1386 aaKnown RBP7.84□□□□□ -1.15
ATXN3-244ENST00000556898 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
ATXN3-244ENST00000556898 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-244ENST00000556898 DUOX2Q9NRD8 1548 aa7.84□□□□□ -1.15
ATXN3-244ENST00000556898 A2ML1A8K2U0 1454 aa7.84□□□□□ -1.15
ATXN3-244ENST00000556898 TRAF7Q6Q0C0 670 aa7.84□□□□□ -1.15
ATXN3-244ENST00000556898 EYA1Q99502 592 aa7.84□□□□□ -1.15
ATXN3-244ENST00000556898 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.84□□□□□ -1.15
ATXN3-244ENST00000556898 TNRQ92752 1358 aa7.84□□□□□ -1.16
ATXN3-244ENST00000556898 KIF3BO15066 747 aa7.83□□□□□ -1.16
ATXN3-244ENST00000556898 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-244ENST00000556898 COPS2P61201 443 aa7.83□□□□□ -1.16
ATXN3-244ENST00000556898 LAPTM4AQ15012 233 aa7.83□□□□□ -1.16
ATXN3-244ENST00000556898 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-244ENST00000556898 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-244ENST00000556898 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
ATXN3-244ENST00000556898 ERBINQ96RT1 1412 aa7.82□□□□□ -1.16
ATXN3-244ENST00000556898 PZPP20742 1482 aa7.81□□□□□ -1.16
ATXN3-244ENST00000556898 HRCP23327 699 aa7.81□□□□□ -1.16
ATXN3-244ENST00000556898 HDGFP51858 240 aaKnown RBP7.81□□□□□ -1.16
ATXN3-244ENST00000556898 CCER1Q8TC90 406 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-244ENST00000556898 V9GY48 417 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-244ENST00000556898 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-244ENST00000556898 NUP155O75694 1391 aa7.81□□□□□ -1.16
ATXN3-244ENST00000556898 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-244ENST00000556898 MPHOSPH9Q99550 1183 aa7.8□□□□□ -1.16
ATXN3-244ENST00000556898 MROH1Q8NDA8 1641 aa7.8□□□□□ -1.16
ATXN3-244ENST00000556898 UNC13BO14795 1591 aa7.8□□□□□ -1.16
ATXN3-244ENST00000556898 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-244ENST00000556898 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 EMID1Q96A84 441 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-244ENST00000556898 SIN3AQ96ST3 1273 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 EIF2AK4Q9P2K8 1649 aaKnown RBP7.78□□□□□ -1.16
ATXN3-244ENST00000556898 KDM5DQ9BY66 1539 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 FAM135AQ9P2D6 1515 aa7.78□□□□□ -1.16
ATXN3-244ENST00000556898 ZPR1O75312 459 aa7.77□□□□□ -1.17
ATXN3-244ENST00000556898 DEPDC5O75140 1603 aa7.77□□□□□ -1.17
ATXN3-244ENST00000556898 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-244ENST00000556898 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-244ENST00000556898 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
ATXN3-244ENST00000556898 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-244ENST00000556898 BCANQ96GW7 911 aa7.76□□□□□ -1.17
ATXN3-244ENST00000556898 RNF17Q9BXT8 1623 aaKnown RBP7.76□□□□□ -1.17
ATXN3-244ENST00000556898 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-244ENST00000556898 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-244ENST00000556898 IQGAP3Q86VI3 1631 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 PRDM15P57071 1507 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-244ENST00000556898 PTGDRQ13258 359 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 FAM161AQ3B820 660 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 CEP152O94986 1710 aa7.75□□□□□ -1.17
ATXN3-244ENST00000556898 ABCC3O15438 1527 aa7.74□□□□□ -1.17
ATXN3-244ENST00000556898 NEUROD1Q13562 356 aa7.74□□□□□ -1.17
ATXN3-244ENST00000556898 BLOC1S3Q6QNY0 202 aa7.74□□□□□ -1.17
ATXN3-244ENST00000556898 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-244ENST00000556898 KANK1Q14678 1352 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 TRIM67Q6ZTA4 783 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 PCDHB3Q9Y5E6 796 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 ADGRG1Q9Y653 693 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-244ENST00000556898 ANKRD30BQ9BXX2 1392 aa7.72□□□□□ -1.17
ATXN3-244ENST00000556898 TESPA1A2RU30 521 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-244ENST00000556898 RNF223E7ERA6 249 aa7.72□□□□□ -1.17
ATXN3-244ENST00000556898 TLL1O43897 1013 aa7.72□□□□□ -1.17
ATXN3-244ENST00000556898 E9PCH4 1651 aa7.72□□□□□ -1.17
ATXN3-244ENST00000556898 LMTK2Q8IWU2 1503 aa7.72□□□□□ -1.17
ATXN3-244ENST00000556898 TET3O43151 1660 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-244ENST00000556898 SEMA3EO15041 775 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 DNAJB2P25686 324 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 GGCXP38435 758 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-244ENST00000556898 NECTIN2Q92692 538 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 EFCAB6Q5THR3 1501 aa7.71□□□□□ -1.18
ATXN3-244ENST00000556898 RCCD1A6NED2 376 aa7.7□□□□□ -1.18
ATXN3-244ENST00000556898 SLC10A3P09131 477 aa7.69□□□□□ -1.18
ATXN3-244ENST00000556898 ACIN1Q9UKV3 1341 aaKnown RBP7.69□□□□□ -1.18
ATXN3-244ENST00000556898 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-244ENST00000556898 ACTN4O43707 911 aaKnown RBP7.68□□□□□ -1.18
ATXN3-244ENST00000556898 SLC19A1P41440 591 aa7.68□□□□□ -1.18
ATXN3-244ENST00000556898 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-244ENST00000556898 ZNF787Q6DD87 383 aa7.68□□□□□ -1.18
ATXN3-244ENST00000556898 RBM46Q8TBY0 533 aaKnown RBP7.68□□□□□ -1.18
ATXN3-244ENST00000556898 SLAIN2Q9P270 581 aa7.68□□□□□ -1.18
ATXN3-244ENST00000556898 SCAF11Q99590 1463 aaKnown RBP7.68□□□□□ -1.18
ATXN3-244ENST00000556898 ZC3H13Q5T200 1668 aaKnown RBP7.67□□□□□ -1.18
ATXN3-244ENST00000556898 NUTM2FA1L443 756 aa7.67□□□□□ -1.18
ATXN3-244ENST00000556898 S1PR4O95977 384 aa7.67□□□□□ -1.18
ATXN3-244ENST00000556898 LIAT1Q6ZQX7 453 aa7.67□□□□□ -1.18
ATXN3-244ENST00000556898 JCADQ9P266 1359 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms