RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.32
EFCAB11-209ENST00000556005 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
EFCAB11-209ENST00000556005 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
EFCAB11-209ENST00000556005 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 AMPHP49418 695 aa13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 FLT4P35916 1363 aa13.01□□□□□ -0.33
EFCAB11-209ENST00000556005 KIF24Q5T7B8 1368 aa13□□□□□ -0.33
EFCAB11-209ENST00000556005 GNAI1P63096 354 aa12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 AAMPQ13685 434 aa12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 MS4A1P11836 297 aa12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 PSME1Q06323 249 aa12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 PIK3C2AO00443 1686 aa12.99□□□□□ -0.33
EFCAB11-209ENST00000556005 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
EFCAB11-209ENST00000556005 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
EFCAB11-209ENST00000556005 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 AEBP1Q8IUX7 1158 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
EFCAB11-209ENST00000556005 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.33
EFCAB11-209ENST00000556005 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
EFCAB11-209ENST00000556005 C19orf44Q9H6X5 657 aa12.96□□□□□ -0.33
EFCAB11-209ENST00000556005 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
EFCAB11-209ENST00000556005 HOXC9P31274 260 aa12.95□□□□□ -0.34
EFCAB11-209ENST00000556005 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
EFCAB11-209ENST00000556005 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
EFCAB11-209ENST00000556005 THUMPD2Q9BTF0 503 aaKnown RBP12.95□□□□□ -0.34
EFCAB11-209ENST00000556005 USP54Q70EL1 1684 aa12.95□□□□□ -0.34
EFCAB11-209ENST00000556005 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
EFCAB11-209ENST00000556005 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
EFCAB11-209ENST00000556005 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
EFCAB11-209ENST00000556005 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
EFCAB11-209ENST00000556005 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
EFCAB11-209ENST00000556005 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
EFCAB11-209ENST00000556005 ORAI2Q96SN7 254 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 EYA1Q99502 592 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 KDRP35968 1356 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 FAM83GA6ND36 823 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 RLBP1P12271 317 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
EFCAB11-209ENST00000556005 FOXO3O43524 673 aa12.92□□□□□ -0.34
EFCAB11-209ENST00000556005 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
EFCAB11-209ENST00000556005 MVPQ14764 893 aaKnown RBP12.92□□□□□ -0.34
EFCAB11-209ENST00000556005 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
EFCAB11-209ENST00000556005 NOB1Q9ULX3 412 aaKnown RBP12.92□□□□□ -0.34
EFCAB11-209ENST00000556005 VAMP4O75379 141 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 NCOA3Q9Y6Q9 1424 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 TRIM27P14373 513 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 ATF3P18847 181 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 IP6K1Q92551 441 aa12.91□□□□□ -0.34
EFCAB11-209ENST00000556005 MARF1Q9Y4F3 1742 aaKnown RBP12.9□□□□□ -0.34
EFCAB11-209ENST00000556005 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
EFCAB11-209ENST00000556005 RTF1Q92541 710 aaKnown RBP12.9□□□□□ -0.34
EFCAB11-209ENST00000556005 TNNQ9UQP3 1299 aa12.9□□□□□ -0.34
EFCAB11-209ENST00000556005 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
EFCAB11-209ENST00000556005 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
EFCAB11-209ENST00000556005 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
EFCAB11-209ENST00000556005 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
EFCAB11-209ENST00000556005 MCM10Q7L590 875 aa12.89□□□□□ -0.35
EFCAB11-209ENST00000556005 KRT28Q7Z3Y7 464 aa12.89□□□□□ -0.35
EFCAB11-209ENST00000556005 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
EFCAB11-209ENST00000556005 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
EFCAB11-209ENST00000556005 CHL1O00533 1208 aa12.88□□□□□ -0.35
EFCAB11-209ENST00000556005 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
EFCAB11-209ENST00000556005 IGHDP01880 384 aa12.88□□□□□ -0.35
EFCAB11-209ENST00000556005 ARHGAP45Q92619 1136 aa12.88□□□□□ -0.35
EFCAB11-209ENST00000556005 DCCP43146 1447 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 HSPA2P54652 639 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 GCP02774 474 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
EFCAB11-209ENST00000556005 NFAT5O94916 1531 aa12.86□□□□□ -0.35
EFCAB11-209ENST00000556005 PDE4AP27815 886 aa12.86□□□□□ -0.35
EFCAB11-209ENST00000556005 RWDD1Q9H446 243 aaPredicted RBP12.86□□□□□ -0.35
EFCAB11-209ENST00000556005 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms