RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 SMAPO00193 183 aa11.22□□□□□ -0.61
SUPT16H-204ENST00000555943 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
SUPT16H-204ENST00000555943 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
SUPT16H-204ENST00000555943 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-204ENST00000555943 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-204ENST00000555943 WASHC2CQ9Y4E1 1318 aa11.22□□□□□ -0.61
SUPT16H-204ENST00000555943 RAB3GAP2Q9H2M9 1393 aa11.21□□□□□ -0.61
SUPT16H-204ENST00000555943 HRCP23327 699 aa11.21□□□□□ -0.61
SUPT16H-204ENST00000555943 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
SUPT16H-204ENST00000555943 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
SUPT16H-204ENST00000555943 TNRQ92752 1358 aa11.2□□□□□ -0.62
SUPT16H-204ENST00000555943 SSTR3P32745 418 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-204ENST00000555943 FAM217BQ9NTX9 383 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-204ENST00000555943 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
SUPT16H-204ENST00000555943 POLR1AO95602 1720 aaPredicted RBP11.19□□□□□ -0.62
SUPT16H-204ENST00000555943 RABGEF1Q9UJ41 708 aa11.19□□□□□ -0.62
SUPT16H-204ENST00000555943 KANK1Q14678 1352 aa11.18□□□□□ -0.62
SUPT16H-204ENST00000555943 DNAJB2P25686 324 aa11.18□□□□□ -0.62
SUPT16H-204ENST00000555943 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
SUPT16H-204ENST00000555943 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
SUPT16H-204ENST00000555943 NUP155O75694 1391 aa11.16□□□□□ -0.62
SUPT16H-204ENST00000555943 ABCC3O15438 1527 aa11.16□□□□□ -0.62
SUPT16H-204ENST00000555943 THEMISQ8N1K5 641 aaPredicted RBP11.16□□□□□ -0.62
SUPT16H-204ENST00000555943 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
SUPT16H-204ENST00000555943 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
SUPT16H-204ENST00000555943 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-204ENST00000555943 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
SUPT16H-204ENST00000555943 SEPT9Q9UHD8 586 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-204ENST00000555943 ZNF335Q9H4Z2 1342 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-204ENST00000555943 DEPDC5O75140 1603 aa11.14□□□□□ -0.63
SUPT16H-204ENST00000555943 ANKLE2Q86XL3 938 aa11.14□□□□□ -0.63
SUPT16H-204ENST00000555943 BEGAINQ9BUH8 593 aa11.14□□□□□ -0.63
SUPT16H-204ENST00000555943 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-204ENST00000555943 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
SUPT16H-204ENST00000555943 CPS1P31327 1500 aa11.13□□□□□ -0.63
SUPT16H-204ENST00000555943 MED14O60244 1454 aa11.12□□□□□ -0.63
SUPT16H-204ENST00000555943 CEP152O94986 1710 aa11.12□□□□□ -0.63
SUPT16H-204ENST00000555943 NEURL4Q96JN8 1562 aa11.12□□□□□ -0.63
SUPT16H-204ENST00000555943 ARHGAP31Q2M1Z3 1444 aa11.12□□□□□ -0.63
SUPT16H-204ENST00000555943 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
SUPT16H-204ENST00000555943 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
SUPT16H-204ENST00000555943 TK2O00142 265 aa11.11□□□□□ -0.63
SUPT16H-204ENST00000555943 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
SUPT16H-204ENST00000555943 IQGAP1P46940 1657 aa11.09□□□□□ -0.63
SUPT16H-204ENST00000555943 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
SUPT16H-204ENST00000555943 BHMG1C9JSJ3 638 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-204ENST00000555943 CCER1Q8TC90 406 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-204ENST00000555943 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-204ENST00000555943 UNC13BO14795 1591 aa11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 MED1Q15648 1581 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 CFAP65Q6ZU64 1925 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 CD46P15529 392 aa11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 UBR1Q8IWV7 1749 aa11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 KDM5AP29375 1690 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-204ENST00000555943 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
SUPT16H-204ENST00000555943 GOPCQ9HD26 462 aa11.07□□□□□ -0.64
SUPT16H-204ENST00000555943 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
SUPT16H-204ENST00000555943 SH3D19Q5HYK7 790 aa11.06□□□□□ -0.64
SUPT16H-204ENST00000555943 LAPTM4BQ86VI4 370 aa11.06□□□□□ -0.64
SUPT16H-204ENST00000555943 VWDEQ8N2E2 1590 aa11.06□□□□□ -0.64
SUPT16H-204ENST00000555943 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-204ENST00000555943 SLIT1O75093 1534 aa11.05□□□□□ -0.64
SUPT16H-204ENST00000555943 TOM1O60784 492 aa11.05□□□□□ -0.64
SUPT16H-204ENST00000555943 IQGAP3Q86VI3 1631 aa11.05□□□□□ -0.64
SUPT16H-204ENST00000555943 SYNMO15061 1565 aa11.04□□□□□ -0.64
SUPT16H-204ENST00000555943 HSPA1LP34931 641 aa11.04□□□□□ -0.64
SUPT16H-204ENST00000555943 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
SUPT16H-204ENST00000555943 SCAF11Q99590 1463 aaKnown RBP11.04□□□□□ -0.64
SUPT16H-204ENST00000555943 ARHGAP23Q9P227 1491 aa11.04□□□□□ -0.64
SUPT16H-204ENST00000555943 HRO43593 1189 aa11.03□□□□□ -0.64
SUPT16H-204ENST00000555943 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
SUPT16H-204ENST00000555943 SAMD7Q7Z3H4 446 aa11.03□□□□□ -0.64
SUPT16H-204ENST00000555943 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
SUPT16H-204ENST00000555943 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
SUPT16H-204ENST00000555943 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 SKIV2LQ15477 1246 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 SPIRE2Q8WWL2 714 aa11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 ZFRQ96KR1 1074 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 EID1Q9Y6B2 187 aa11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 EFCAB6Q5THR3 1501 aa11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
SUPT16H-204ENST00000555943 TET3O43151 1660 aa11.01□□□□□ -0.65
SUPT16H-204ENST00000555943 SLC10A3P09131 477 aa11.01□□□□□ -0.65
SUPT16H-204ENST00000555943 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-204ENST00000555943 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
SUPT16H-204ENST00000555943 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
SUPT16H-204ENST00000555943 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
SUPT16H-204ENST00000555943 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
SUPT16H-204ENST00000555943 CLSPNQ9HAW4 1339 aa11□□□□□ -0.65
SUPT16H-204ENST00000555943 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
SUPT16H-204ENST00000555943 NOS1P29475 1434 aa11□□□□□ -0.65
SUPT16H-204ENST00000555943 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms