RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RBM25P49756 843 aaKnown RBP20.33■□□□□ 0.85
TUBB3-209ENST00000555609 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
TUBB3-209ENST00000555609 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.85
TUBB3-209ENST00000555609 IL13P35225 146 aa20.33■□□□□ 0.84
TUBB3-209ENST00000555609 CHD1LQ86WJ1 897 aa20.33■□□□□ 0.84
TUBB3-209ENST00000555609 SNX21Q969T3 373 aa20.33■□□□□ 0.84
TUBB3-209ENST00000555609 WASLO00401 505 aaPredicted RBP20.32■□□□□ 0.84
TUBB3-209ENST00000555609 RIMS1Q86UR5 1692 aaKnown RBP20.32■□□□□ 0.84
TUBB3-209ENST00000555609 ZBTB7BO15156 539 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-209ENST00000555609 MFAP1P55081 439 aaKnown RBP20.31■□□□□ 0.84
TUBB3-209ENST00000555609 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
TUBB3-209ENST00000555609 FER1L4A9Z1Z3 1794 aa20.31■□□□□ 0.84
TUBB3-209ENST00000555609 HSCBQ8IWL3 235 aa20.3■□□□□ 0.84
TUBB3-209ENST00000555609 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
TUBB3-209ENST00000555609 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
TUBB3-209ENST00000555609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
TUBB3-209ENST00000555609 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
TUBB3-209ENST00000555609 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 API5Q9BZZ5 524 aaKnown RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 TECPR2O15040 1411 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 ABCC4O15439 1325 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 KNDC1Q76NI1 1749 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 MCM4P33991 863 aa20.27■□□□□ 0.84
TUBB3-209ENST00000555609 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
TUBB3-209ENST00000555609 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
TUBB3-209ENST00000555609 COG3Q96JB2 828 aa20.26■□□□□ 0.83
TUBB3-209ENST00000555609 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-209ENST00000555609 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
TUBB3-209ENST00000555609 CEBPAP49715 358 aaPredicted RBP20.24■□□□□ 0.83
TUBB3-209ENST00000555609 MON2Q7Z3U7 1717 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 FAM43AQ8N2R8 423 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 LNPKQ9C0E8 428 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 PRKCSHP14314 528 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-209ENST00000555609 NUDT16Q96DE0 195 aaKnown RBP20.23■□□□□ 0.83
TUBB3-209ENST00000555609 HMOX1P09601 288 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
TUBB3-209ENST00000555609 EMILIN1Q9Y6C2 1016 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 PTMSP20962 102 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
TUBB3-209ENST00000555609 CPS1P31327 1500 aa20.21■□□□□ 0.83
TUBB3-209ENST00000555609 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
TUBB3-209ENST00000555609 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
TUBB3-209ENST00000555609 DDIT3P35638 169 aa20.2■□□□□ 0.82
TUBB3-209ENST00000555609 NME9Q86XW9 330 aa20.2■□□□□ 0.82
TUBB3-209ENST00000555609 ISY1Q9ULR0 285 aaKnown RBP20.2■□□□□ 0.82
TUBB3-209ENST00000555609 AKAP12Q02952 1782 aa20.2■□□□□ 0.82
TUBB3-209ENST00000555609 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-209ENST00000555609 C3P01024 1663 aa20.19■□□□□ 0.82
TUBB3-209ENST00000555609 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
TUBB3-209ENST00000555609 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
TUBB3-209ENST00000555609 METP08581 1390 aa20.18■□□□□ 0.82
TUBB3-209ENST00000555609 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
TUBB3-209ENST00000555609 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
TUBB3-209ENST00000555609 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
TUBB3-209ENST00000555609 GOLGA6L3A6NEY3 463 aa20.16■□□□□ 0.82
TUBB3-209ENST00000555609 FBLN1P23142 703 aa20.16■□□□□ 0.82
TUBB3-209ENST00000555609 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
TUBB3-209ENST00000555609 ITSN1Q15811 1721 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 KIAA0232Q92628 1395 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 SIRT2Q8IXJ6 389 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 TRAK2O60296 914 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 CDC45O75419 566 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 DCTPP1Q9H773 170 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
TUBB3-209ENST00000555609 RPAP2Q8IXW5 612 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-209ENST00000555609 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
TUBB3-209ENST00000555609 TBC1D9Q6ZT07 1266 aa20.12■□□□□ 0.81
TUBB3-209ENST00000555609 GBP4Q96PP9 640 aa20.12■□□□□ 0.81
TUBB3-209ENST00000555609 PTPRCP08575 1304 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 SKOR2Q2VWA4 1001 aaPredicted RBP20.11■□□□□ 0.81
TUBB3-209ENST00000555609 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 CHL1O00533 1208 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 KIF2CQ99661 725 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 ANKRD44Q8N8A2 993 aa20.1■□□□□ 0.81
TUBB3-209ENST00000555609 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
TUBB3-209ENST00000555609 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
TUBB3-209ENST00000555609 C1orf115Q9H7X2 142 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 K7ELQ4 463 aaPredicted RBP20.09■□□□□ 0.81
TUBB3-209ENST00000555609 MRE11P49959 708 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
TUBB3-209ENST00000555609 OVOS2A0A0J9YW53 1432 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 OVOS2Q6IE36 1432 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 USP31Q70CQ4 1352 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 TNRQ92752 1358 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 TMEM2Q9UHN6 1383 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
TUBB3-209ENST00000555609 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
TUBB3-209ENST00000555609 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
TUBB3-209ENST00000555609 CLEC17AQ6ZS10 378 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms