RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RBM25P49756 843 aaKnown RBP20.33■□□□□ 0.85
TUBB3-209ENST00000555609 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
TUBB3-209ENST00000555609 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.85
TUBB3-209ENST00000555609 IL13P35225 146 aa20.33■□□□□ 0.84
TUBB3-209ENST00000555609 CHD1LQ86WJ1 897 aa20.33■□□□□ 0.84
TUBB3-209ENST00000555609 SNX21Q969T3 373 aa20.33■□□□□ 0.84
TUBB3-209ENST00000555609 WASLO00401 505 aaPredicted RBP20.32■□□□□ 0.84
TUBB3-209ENST00000555609 RIMS1Q86UR5 1692 aaKnown RBP20.32■□□□□ 0.84
TUBB3-209ENST00000555609 ZBTB7BO15156 539 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-209ENST00000555609 MFAP1P55081 439 aaKnown RBP20.31■□□□□ 0.84
TUBB3-209ENST00000555609 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
TUBB3-209ENST00000555609 FER1L4A9Z1Z3 1794 aa20.31■□□□□ 0.84
TUBB3-209ENST00000555609 HSCBQ8IWL3 235 aa20.3■□□□□ 0.84
TUBB3-209ENST00000555609 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
TUBB3-209ENST00000555609 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
TUBB3-209ENST00000555609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
TUBB3-209ENST00000555609 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
TUBB3-209ENST00000555609 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 API5Q9BZZ5 524 aaKnown RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 TECPR2O15040 1411 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 ABCC4O15439 1325 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
TUBB3-209ENST00000555609 KNDC1Q76NI1 1749 aa20.28■□□□□ 0.84
TUBB3-209ENST00000555609 MCM4P33991 863 aa20.27■□□□□ 0.84
TUBB3-209ENST00000555609 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
TUBB3-209ENST00000555609 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
TUBB3-209ENST00000555609 COG3Q96JB2 828 aa20.26■□□□□ 0.83
TUBB3-209ENST00000555609 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-209ENST00000555609 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
TUBB3-209ENST00000555609 CEBPAP49715 358 aaPredicted RBP20.24■□□□□ 0.83
TUBB3-209ENST00000555609 MON2Q7Z3U7 1717 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 FAM43AQ8N2R8 423 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 LNPKQ9C0E8 428 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
TUBB3-209ENST00000555609 PRKCSHP14314 528 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-209ENST00000555609 NUDT16Q96DE0 195 aaKnown RBP20.23■□□□□ 0.83
TUBB3-209ENST00000555609 HMOX1P09601 288 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
TUBB3-209ENST00000555609 EMILIN1Q9Y6C2 1016 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 PTMSP20962 102 aa20.22■□□□□ 0.83
TUBB3-209ENST00000555609 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
TUBB3-209ENST00000555609 CPS1P31327 1500 aa20.21■□□□□ 0.83
TUBB3-209ENST00000555609 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
TUBB3-209ENST00000555609 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
TUBB3-209ENST00000555609 DDIT3P35638 169 aa20.2■□□□□ 0.82
TUBB3-209ENST00000555609 NME9Q86XW9 330 aa20.2■□□□□ 0.82
TUBB3-209ENST00000555609 ISY1Q9ULR0 285 aaKnown RBP20.2■□□□□ 0.82
TUBB3-209ENST00000555609 AKAP12Q02952 1782 aa20.2■□□□□ 0.82
TUBB3-209ENST00000555609 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-209ENST00000555609 C3P01024 1663 aa20.19■□□□□ 0.82
TUBB3-209ENST00000555609 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
TUBB3-209ENST00000555609 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
TUBB3-209ENST00000555609 METP08581 1390 aa20.18■□□□□ 0.82
TUBB3-209ENST00000555609 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
TUBB3-209ENST00000555609 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
TUBB3-209ENST00000555609 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
TUBB3-209ENST00000555609 GOLGA6L3A6NEY3 463 aa20.16■□□□□ 0.82
TUBB3-209ENST00000555609 FBLN1P23142 703 aa20.16■□□□□ 0.82
TUBB3-209ENST00000555609 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
TUBB3-209ENST00000555609 ITSN1Q15811 1721 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 KIAA0232Q92628 1395 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 SIRT2Q8IXJ6 389 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
TUBB3-209ENST00000555609 TRAK2O60296 914 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 CDC45O75419 566 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 DCTPP1Q9H773 170 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
TUBB3-209ENST00000555609 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
TUBB3-209ENST00000555609 RPAP2Q8IXW5 612 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-209ENST00000555609 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
TUBB3-209ENST00000555609 TBC1D9Q6ZT07 1266 aa20.12■□□□□ 0.81
TUBB3-209ENST00000555609 GBP4Q96PP9 640 aa20.12■□□□□ 0.81
TUBB3-209ENST00000555609 PTPRCP08575 1304 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 SKOR2Q2VWA4 1001 aaPredicted RBP20.11■□□□□ 0.81
TUBB3-209ENST00000555609 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 CHL1O00533 1208 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 KIF2CQ99661 725 aa20.11■□□□□ 0.81
TUBB3-209ENST00000555609 ANKRD44Q8N8A2 993 aa20.1■□□□□ 0.81
TUBB3-209ENST00000555609 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
TUBB3-209ENST00000555609 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
TUBB3-209ENST00000555609 C1orf115Q9H7X2 142 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 K7ELQ4 463 aaPredicted RBP20.09■□□□□ 0.81
TUBB3-209ENST00000555609 MRE11P49959 708 aa20.09■□□□□ 0.81
TUBB3-209ENST00000555609 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
TUBB3-209ENST00000555609 OVOS2A0A0J9YW53 1432 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 OVOS2Q6IE36 1432 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 USP31Q70CQ4 1352 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 TNRQ92752 1358 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 TMEM2Q9UHN6 1383 aa20.08■□□□□ 0.8
TUBB3-209ENST00000555609 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
TUBB3-209ENST00000555609 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
TUBB3-209ENST00000555609 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
TUBB3-209ENST00000555609 CLEC17AQ6ZS10 378 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 472.2 ms