RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
RPGRIP1-208ENST00000555489 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
RPGRIP1-208ENST00000555489 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
RPGRIP1-208ENST00000555489 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
RPGRIP1-208ENST00000555489 HMOX1P09601 288 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 NME9Q86XW9 330 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 TNRQ92752 1358 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 TXNDC2Q86VQ3 553 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 TMEM2Q9UHN6 1383 aa12.55□□□□□ -0.4
RPGRIP1-208ENST00000555489 VAMP4O75379 141 aa12.54□□□□□ -0.4
RPGRIP1-208ENST00000555489 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
RPGRIP1-208ENST00000555489 NRKQ7Z2Y5 1582 aa12.54□□□□□ -0.4
RPGRIP1-208ENST00000555489 HAP1P54257 671 aaPredicted RBP12.53□□□□□ -0.4
RPGRIP1-208ENST00000555489 NUCB1Q02818 461 aa12.53□□□□□ -0.4
RPGRIP1-208ENST00000555489 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
RPGRIP1-208ENST00000555489 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
RPGRIP1-208ENST00000555489 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
RPGRIP1-208ENST00000555489 UBR1Q8IWV7 1749 aa12.52□□□□□ -0.4
RPGRIP1-208ENST00000555489 FBLN1P23142 703 aa12.52□□□□□ -0.4
RPGRIP1-208ENST00000555489 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
RPGRIP1-208ENST00000555489 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
RPGRIP1-208ENST00000555489 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
RPGRIP1-208ENST00000555489 ABCC4O15439 1325 aa12.51□□□□□ -0.41
RPGRIP1-208ENST00000555489 ZBTB7BO15156 539 aaPredicted RBP12.51□□□□□ -0.41
RPGRIP1-208ENST00000555489 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
RPGRIP1-208ENST00000555489 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
RPGRIP1-208ENST00000555489 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
RPGRIP1-208ENST00000555489 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
RPGRIP1-208ENST00000555489 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
RPGRIP1-208ENST00000555489 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
RPGRIP1-208ENST00000555489 ANTXR1Q9H6X2 564 aa12.5□□□□□ -0.41
RPGRIP1-208ENST00000555489 PLEKHG1Q9ULL1 1385 aa12.5□□□□□ -0.41
RPGRIP1-208ENST00000555489 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
RPGRIP1-208ENST00000555489 RRS1Q15050 365 aaKnown RBP12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 ROBO2Q9HCK4 1378 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 PRR36Q9H6K5 1346 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
RPGRIP1-208ENST00000555489 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
RPGRIP1-208ENST00000555489 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
RPGRIP1-208ENST00000555489 TTC21BQ7Z4L5 1316 aa12.48□□□□□ -0.41
RPGRIP1-208ENST00000555489 EIF5BO60841 1220 aaKnown RBP12.47□□□□□ -0.41
RPGRIP1-208ENST00000555489 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
RPGRIP1-208ENST00000555489 USP6P35125 1406 aa12.47□□□□□ -0.41
RPGRIP1-208ENST00000555489 NALCNQ8IZF0 1738 aa12.47□□□□□ -0.41
RPGRIP1-208ENST00000555489 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
RPGRIP1-208ENST00000555489 LNPKQ9C0E8 428 aa12.47□□□□□ -0.41
RPGRIP1-208ENST00000555489 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.42
RPGRIP1-208ENST00000555489 USP31Q70CQ4 1352 aa12.46□□□□□ -0.42
RPGRIP1-208ENST00000555489 KIAA0232Q92628 1395 aa12.46□□□□□ -0.42
RPGRIP1-208ENST00000555489 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.42
RPGRIP1-208ENST00000555489 ACEP12821 1306 aa12.45□□□□□ -0.42
RPGRIP1-208ENST00000555489 HSCBQ8IWL3 235 aa12.45□□□□□ -0.42
RPGRIP1-208ENST00000555489 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
RPGRIP1-208ENST00000555489 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
RPGRIP1-208ENST00000555489 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
RPGRIP1-208ENST00000555489 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
RPGRIP1-208ENST00000555489 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
RPGRIP1-208ENST00000555489 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
RPGRIP1-208ENST00000555489 CHMP5Q9NZZ3 219 aa12.44□□□□□ -0.42
RPGRIP1-208ENST00000555489 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 SNX21Q969T3 373 aa12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 CHL1O00533 1208 aa12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 INTS3Q68E01 1043 aaKnown RBP12.43□□□□□ -0.42
RPGRIP1-208ENST00000555489 PTPRCP08575 1304 aa12.42□□□□□ -0.42
RPGRIP1-208ENST00000555489 SLIT1O75093 1534 aa12.42□□□□□ -0.42
RPGRIP1-208ENST00000555489 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 DIP2AQ14689 1571 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 LTKP29376 864 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 DCTN1Q14203 1278 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 AEBP1Q8IUX7 1158 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 C1orf115Q9H7X2 142 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 ARHGAP23Q9P227 1491 aa12.41□□□□□ -0.42
RPGRIP1-208ENST00000555489 PEAK1Q9H792 1746 aa12.4□□□□□ -0.42
RPGRIP1-208ENST00000555489 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.43
RPGRIP1-208ENST00000555489 SBNO1A3KN83 1393 aa12.4□□□□□ -0.43
RPGRIP1-208ENST00000555489 FLT4P35916 1363 aa12.4□□□□□ -0.43
RPGRIP1-208ENST00000555489 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
RPGRIP1-208ENST00000555489 DCTPP1Q9H773 170 aa12.39□□□□□ -0.43
RPGRIP1-208ENST00000555489 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
RPGRIP1-208ENST00000555489 RGS12O14924 1447 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 KDRP35968 1356 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 CDC45O75419 566 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 FMN2Q9NZ56 1722 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 RIMS1Q86UR5 1692 aaKnown RBP12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 CRB1P82279 1406 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms