RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
CFAP54-204ENST00000553778 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
CFAP54-204ENST00000553778 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
CFAP54-204ENST00000553778 MTERF4Q7Z6M4 381 aaKnown RBP12.72□□□□□ -0.37
CFAP54-204ENST00000553778 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
CFAP54-204ENST00000553778 BLMP54132 1417 aaPredicted RBP12.72□□□□□ -0.37
CFAP54-204ENST00000553778 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
CFAP54-204ENST00000553778 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
CFAP54-204ENST00000553778 COL16A1Q07092 1604 aaPredicted RBP12.71□□□□□ -0.37
CFAP54-204ENST00000553778 PXDNQ92626 1479 aa12.71□□□□□ -0.37
CFAP54-204ENST00000553778 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
CFAP54-204ENST00000553778 USP19O94966 1318 aa12.71□□□□□ -0.37
CFAP54-204ENST00000553778 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
CFAP54-204ENST00000553778 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
CFAP54-204ENST00000553778 TOPAZ1Q8N9V7 1692 aa12.7□□□□□ -0.38
CFAP54-204ENST00000553778 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
CFAP54-204ENST00000553778 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
CFAP54-204ENST00000553778 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
CFAP54-204ENST00000553778 PDE4CQ08493 712 aa12.69□□□□□ -0.38
CFAP54-204ENST00000553778 ABTB2Q8N961 1025 aa12.69□□□□□ -0.38
CFAP54-204ENST00000553778 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
CFAP54-204ENST00000553778 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
CFAP54-204ENST00000553778 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
CFAP54-204ENST00000553778 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
CFAP54-204ENST00000553778 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
CFAP54-204ENST00000553778 TNS3Q68CZ2 1445 aa12.68□□□□□ -0.38
CFAP54-204ENST00000553778 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
CFAP54-204ENST00000553778 MCM4P33991 863 aa12.67□□□□□ -0.38
CFAP54-204ENST00000553778 PANK2Q9BZ23 570 aa12.67□□□□□ -0.38
CFAP54-204ENST00000553778 USP6P35125 1406 aa12.67□□□□□ -0.38
CFAP54-204ENST00000553778 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
CFAP54-204ENST00000553778 NLRP13Q86W25 1043 aa12.67□□□□□ -0.38
CFAP54-204ENST00000553778 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
CFAP54-204ENST00000553778 PARD3Q8TEW0 1356 aa12.66□□□□□ -0.38
CFAP54-204ENST00000553778 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
CFAP54-204ENST00000553778 HAP1P54257 671 aaPredicted RBP12.66□□□□□ -0.38
CFAP54-204ENST00000553778 TRIM44Q96DX7 344 aaPredicted RBP12.66□□□□□ -0.38
CFAP54-204ENST00000553778 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 TTC21BQ7Z4L5 1316 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
CFAP54-204ENST00000553778 A0A1W2PP64 1363 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 OFD1O75665 1012 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 NUTM2GQ5VZR2 741 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.65□□□□□ -0.38
CFAP54-204ENST00000553778 KIAA1211Q6ZU35 1233 aa12.65□□□□□ -0.38
CFAP54-204ENST00000553778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.65□□□□□ -0.38
CFAP54-204ENST00000553778 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
CFAP54-204ENST00000553778 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
CFAP54-204ENST00000553778 RGS3P49796 1198 aa12.64□□□□□ -0.39
CFAP54-204ENST00000553778 NLRP6P59044 892 aa12.64□□□□□ -0.39
CFAP54-204ENST00000553778 SKAP1Q86WV1 359 aa12.64□□□□□ -0.39
CFAP54-204ENST00000553778 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
CFAP54-204ENST00000553778 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
CFAP54-204ENST00000553778 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
CFAP54-204ENST00000553778 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
CFAP54-204ENST00000553778 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
CFAP54-204ENST00000553778 PLIN1O60240 522 aa12.62□□□□□ -0.39
CFAP54-204ENST00000553778 TRAK2O60296 914 aa12.62□□□□□ -0.39
CFAP54-204ENST00000553778 ADAMTS2O95450 1211 aa12.62□□□□□ -0.39
CFAP54-204ENST00000553778 EDC4Q6P2E9 1401 aaKnown RBP12.62□□□□□ -0.39
CFAP54-204ENST00000553778 PANK3Q9H999 370 aa12.61□□□□□ -0.39
CFAP54-204ENST00000553778 AKAP12Q02952 1782 aa12.61□□□□□ -0.39
CFAP54-204ENST00000553778 PTMSP20962 102 aa12.61□□□□□ -0.39
CFAP54-204ENST00000553778 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
CFAP54-204ENST00000553778 PPP1R9BQ96SB3 815 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 CHMP5Q9NZZ3 219 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 ALS2Q96Q42 1657 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 RIPK4P57078 832 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 ZSCAN30Q86W11 494 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 NME9Q86XW9 330 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 NGLY1Q96IV0 654 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
CFAP54-204ENST00000553778 SLKQ9H2G2 1235 aaPredicted RBP12.6□□□□□ -0.39
CFAP54-204ENST00000553778 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
CFAP54-204ENST00000553778 GCP02774 474 aa12.58□□□□□ -0.4
CFAP54-204ENST00000553778 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
CFAP54-204ENST00000553778 LRP6O75581 1613 aa12.58□□□□□ -0.4
CFAP54-204ENST00000553778 MON2Q7Z3U7 1717 aa12.58□□□□□ -0.4
CFAP54-204ENST00000553778 COG3Q96JB2 828 aa12.58□□□□□ -0.4
CFAP54-204ENST00000553778 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
CFAP54-204ENST00000553778 MYOM1P52179 1685 aa12.57□□□□□ -0.4
CFAP54-204ENST00000553778 FYB1O15117 783 aa12.57□□□□□ -0.4
CFAP54-204ENST00000553778 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
CFAP54-204ENST00000553778 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
CFAP54-204ENST00000553778 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
CFAP54-204ENST00000553778 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
CFAP54-204ENST00000553778 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
CFAP54-204ENST00000553778 USP31Q70CQ4 1352 aa12.57□□□□□ -0.4
CFAP54-204ENST00000553778 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
CFAP54-204ENST00000553778 DMTNQ08495 405 aa12.56□□□□□ -0.4
CFAP54-204ENST00000553778 SKOR2Q2VWA4 1001 aaPredicted RBP12.56□□□□□ -0.4
CFAP54-204ENST00000553778 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
CFAP54-204ENST00000553778 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms