RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 NUTM2GQ5VZR2 741 aa19.98■□□□□ 0.79
SCN8A-206ENST00000550891 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
SCN8A-206ENST00000550891 PSME1Q06323 249 aa19.98■□□□□ 0.79
SCN8A-206ENST00000550891 PROSER2Q86WR7 435 aaPredicted RBP19.97■□□□□ 0.79
SCN8A-206ENST00000550891 SMC4Q9NTJ3 1288 aa19.97■□□□□ 0.79
SCN8A-206ENST00000550891 MAP3K19Q56UN5 1328 aa19.97■□□□□ 0.79
SCN8A-206ENST00000550891 ADGRL3Q9HAR2 1447 aa19.97■□□□□ 0.79
SCN8A-206ENST00000550891 RGPD8O14715 1765 aaPredicted RBP19.96■□□□□ 0.79
SCN8A-206ENST00000550891 FLT4P35916 1363 aa19.96■□□□□ 0.79
SCN8A-206ENST00000550891 FMN2Q9NZ56 1722 aa19.95■□□□□ 0.78
SCN8A-206ENST00000550891 MS4A1P11836 297 aa19.95■□□□□ 0.78
SCN8A-206ENST00000550891 FTSJ3Q8IY81 847 aaKnown RBP19.95■□□□□ 0.78
SCN8A-206ENST00000550891 PANK1Q8TE04 598 aa19.95■□□□□ 0.78
SCN8A-206ENST00000550891 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
SCN8A-206ENST00000550891 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
SCN8A-206ENST00000550891 GNAI1P63096 354 aa19.94■□□□□ 0.78
SCN8A-206ENST00000550891 CENPQQ7L2Z9 268 aaPredicted RBP19.94■□□□□ 0.78
SCN8A-206ENST00000550891 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
SCN8A-206ENST00000550891 AEBP1Q8IUX7 1158 aa19.93■□□□□ 0.78
SCN8A-206ENST00000550891 THUMPD2Q9BTF0 503 aaKnown RBP19.92■□□□□ 0.78
SCN8A-206ENST00000550891 TCERG1O14776 1098 aaKnown RBP19.92■□□□□ 0.78
SCN8A-206ENST00000550891 CLUAP1Q96AJ1 413 aa19.92■□□□□ 0.78
SCN8A-206ENST00000550891 NALCNQ8IZF0 1738 aa19.91■□□□□ 0.78
SCN8A-206ENST00000550891 IFT57Q9NWB7 429 aa19.91■□□□□ 0.78
SCN8A-206ENST00000550891 IPO8O15397 1037 aaKnown RBP19.89■□□□□ 0.77
SCN8A-206ENST00000550891 AAMPQ13685 434 aa19.89■□□□□ 0.77
SCN8A-206ENST00000550891 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
SCN8A-206ENST00000550891 SSH1Q8WYL5 1049 aa19.88■□□□□ 0.77
SCN8A-206ENST00000550891 ZNF428Q96B54 188 aa19.88■□□□□ 0.77
SCN8A-206ENST00000550891 DZIP1LQ8IYY4 767 aaKnown RBP19.87■□□□□ 0.77
SCN8A-206ENST00000550891 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
SCN8A-206ENST00000550891 ARHGEF10O15013 1369 aa19.87■□□□□ 0.77
SCN8A-206ENST00000550891 FOXO3O43524 673 aa19.87■□□□□ 0.77
SCN8A-206ENST00000550891 ZBTB7CA1YPR0 619 aa19.86■□□□□ 0.77
SCN8A-206ENST00000550891 RTF1Q92541 710 aaKnown RBP19.86■□□□□ 0.77
SCN8A-206ENST00000550891 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
SCN8A-206ENST00000550891 LTV1Q96GA3 475 aaPredicted RBP19.86■□□□□ 0.77
SCN8A-206ENST00000550891 CFAP44Q96MT7 982 aa19.86■□□□□ 0.77
SCN8A-206ENST00000550891 C19orf44Q9H6X5 657 aa19.86■□□□□ 0.77
SCN8A-206ENST00000550891 KIF24Q5T7B8 1368 aa19.86■□□□□ 0.77
SCN8A-206ENST00000550891 ATF3P18847 181 aa19.86■□□□□ 0.77
SCN8A-206ENST00000550891 FAM83GA6ND36 823 aa19.85■□□□□ 0.77
SCN8A-206ENST00000550891 HOXC9P31274 260 aa19.85■□□□□ 0.77
SCN8A-206ENST00000550891 DCTN1Q14203 1278 aa19.85■□□□□ 0.77
SCN8A-206ENST00000550891 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
SCN8A-206ENST00000550891 KCNH5Q8NCM2 988 aa19.85■□□□□ 0.77
SCN8A-206ENST00000550891 ORAI2Q96SN7 254 aa19.85■□□□□ 0.77
SCN8A-206ENST00000550891 KDM2BQ8NHM5 1336 aa19.84■□□□□ 0.77
SCN8A-206ENST00000550891 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
SCN8A-206ENST00000550891 EYA1Q99502 592 aa19.84■□□□□ 0.77
SCN8A-206ENST00000550891 MBIPQ9NS73 344 aa19.84■□□□□ 0.77
SCN8A-206ENST00000550891 ATF7IPQ6VMQ6 1270 aa19.83■□□□□ 0.77
SCN8A-206ENST00000550891 PEAK1Q9H792 1746 aa19.83■□□□□ 0.76
SCN8A-206ENST00000550891 RLBP1P12271 317 aa19.83■□□□□ 0.76
SCN8A-206ENST00000550891 ELL2O00472 640 aaPredicted RBP19.82■□□□□ 0.76
SCN8A-206ENST00000550891 HAP1P54257 671 aaPredicted RBP19.82■□□□□ 0.76
SCN8A-206ENST00000550891 XPCQ01831 940 aaPredicted RBP19.82■□□□□ 0.76
SCN8A-206ENST00000550891 NOB1Q9ULX3 412 aaKnown RBP19.82■□□□□ 0.76
SCN8A-206ENST00000550891 MVPQ14764 893 aaKnown RBP19.82■□□□□ 0.76
SCN8A-206ENST00000550891 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
SCN8A-206ENST00000550891 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
SCN8A-206ENST00000550891 TNNQ9UQP3 1299 aa19.81■□□□□ 0.76
SCN8A-206ENST00000550891 HSPA2P54652 639 aa19.81■□□□□ 0.76
SCN8A-206ENST00000550891 TWISTNBQ3B726 338 aaPredicted RBP19.81■□□□□ 0.76
SCN8A-206ENST00000550891 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
SCN8A-206ENST00000550891 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
SCN8A-206ENST00000550891 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
SCN8A-206ENST00000550891 TRIM27P14373 513 aa19.8■□□□□ 0.76
SCN8A-206ENST00000550891 MCM10Q7L590 875 aa19.8■□□□□ 0.76
SCN8A-206ENST00000550891 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
SCN8A-206ENST00000550891 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
SCN8A-206ENST00000550891 VAMP4O75379 141 aa19.78■□□□□ 0.76
SCN8A-206ENST00000550891 KRT28Q7Z3Y7 464 aa19.78■□□□□ 0.76
SCN8A-206ENST00000550891 MTHFSDQ2M296 383 aaKnown RBP19.77■□□□□ 0.76
SCN8A-206ENST00000550891 IP6K1Q92551 441 aa19.77■□□□□ 0.76
SCN8A-206ENST00000550891 TMEM94Q12767 1356 aa19.77■□□□□ 0.76
SCN8A-206ENST00000550891 KDRP35968 1356 aa19.76■□□□□ 0.75
SCN8A-206ENST00000550891 RGS3P49796 1198 aa19.76■□□□□ 0.75
SCN8A-206ENST00000550891 TSPYL6Q8N831 410 aa19.76■□□□□ 0.75
SCN8A-206ENST00000550891 RWDD1Q9H446 243 aaPredicted RBP19.76■□□□□ 0.75
SCN8A-206ENST00000550891 ANP32AP39687 249 aaKnown RBP19.75■□□□□ 0.75
SCN8A-206ENST00000550891 CADPS2Q86UW7 1296 aa19.75■□□□□ 0.75
SCN8A-206ENST00000550891 DLG5Q8TDM6 1919 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 PDE4AP27815 886 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 SKAP1Q86WV1 359 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
SCN8A-206ENST00000550891 C1orf167Q5SNV9 1468 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 IGHDP01880 384 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 GCP02774 474 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 C8orf58Q8NAV2 365 aa19.74■□□□□ 0.75
SCN8A-206ENST00000550891 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
SCN8A-206ENST00000550891 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
SCN8A-206ENST00000550891 TMEM57Q8N5G2 664 aa19.72■□□□□ 0.75
SCN8A-206ENST00000550891 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SCN8A-206ENST00000550891 CHL1O00533 1208 aa19.72■□□□□ 0.75
SCN8A-206ENST00000550891 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
SCN8A-206ENST00000550891 MRPL50Q8N5N7 158 aaKnown RBP19.71■□□□□ 0.75
SCN8A-206ENST00000550891 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
SCN8A-206ENST00000550891 HTATSF1O43719 755 aaKnown RBP19.71■□□□□ 0.75
SCN8A-206ENST00000550891 ARHGAP45Q92619 1136 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms