RNA–Protein interactions for RNA: ENST00000550802.1

PFKM-220, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-220ENST00000550802 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
PFKM-220ENST00000550802 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
PFKM-220ENST00000550802 USP31Q70CQ4 1352 aa11.95□□□□□ -0.5
PFKM-220ENST00000550802 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
PFKM-220ENST00000550802 CT47B1P0C2W7 299 aaPredicted RBP11.95□□□□□ -0.5
PFKM-220ENST00000550802 TMPOP42166 694 aaKnown RBP11.95□□□□□ -0.5
PFKM-220ENST00000550802 LMOD3Q0VAK6 560 aa11.95□□□□□ -0.5
PFKM-220ENST00000550802 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
PFKM-220ENST00000550802 LRRC59Q96AG4 307 aaKnown RBP11.95□□□□□ -0.5
PFKM-220ENST00000550802 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
PFKM-220ENST00000550802 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
PFKM-220ENST00000550802 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
PFKM-220ENST00000550802 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
PFKM-220ENST00000550802 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
PFKM-220ENST00000550802 RRP7AQ9Y3A4 280 aaKnown RBP11.94□□□□□ -0.5
PFKM-220ENST00000550802 MST1RQ04912 1400 aa11.94□□□□□ -0.5
PFKM-220ENST00000550802 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
PFKM-220ENST00000550802 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
PFKM-220ENST00000550802 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
PFKM-220ENST00000550802 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
PFKM-220ENST00000550802 CANXP27824 592 aaKnown RBP11.92□□□□□ -0.5
PFKM-220ENST00000550802 IL13P35225 146 aa11.92□□□□□ -0.5
PFKM-220ENST00000550802 PMFBP1Q8TBY8 1022 aa11.92□□□□□ -0.5
PFKM-220ENST00000550802 NHSL1Q5SYE7 1610 aa11.92□□□□□ -0.5
PFKM-220ENST00000550802 AFF2P51816 1311 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 RIPK4P57078 832 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 FLT4P35916 1363 aa11.91□□□□□ -0.5
PFKM-220ENST00000550802 MS4A1P11836 297 aa11.9□□□□□ -0.5
PFKM-220ENST00000550802 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
PFKM-220ENST00000550802 NFE2L2Q16236 605 aa11.9□□□□□ -0.5
PFKM-220ENST00000550802 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
PFKM-220ENST00000550802 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
PFKM-220ENST00000550802 AAMPQ13685 434 aa11.89□□□□□ -0.51
PFKM-220ENST00000550802 PDE3AQ14432 1141 aa11.89□□□□□ -0.51
PFKM-220ENST00000550802 CRBNQ96SW2 442 aa11.89□□□□□ -0.51
PFKM-220ENST00000550802 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
PFKM-220ENST00000550802 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
PFKM-220ENST00000550802 KIF1AQ12756 1690 aa11.89□□□□□ -0.51
PFKM-220ENST00000550802 PLIN1O60240 522 aa11.88□□□□□ -0.51
PFKM-220ENST00000550802 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
PFKM-220ENST00000550802 C1orf167Q5SNV9 1468 aa11.88□□□□□ -0.51
PFKM-220ENST00000550802 HMOX1P09601 288 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 AMPHP49418 695 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 NLRP6P59044 892 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
PFKM-220ENST00000550802 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 C8orf37Q96NL8 207 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 RTL1A6NKG5 1358 aa11.87□□□□□ -0.51
PFKM-220ENST00000550802 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
PFKM-220ENST00000550802 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
PFKM-220ENST00000550802 PSME1Q06323 249 aa11.86□□□□□ -0.51
PFKM-220ENST00000550802 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
PFKM-220ENST00000550802 ABTB2Q8N961 1025 aa11.86□□□□□ -0.51
PFKM-220ENST00000550802 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
PFKM-220ENST00000550802 PEAK1Q9H792 1746 aa11.86□□□□□ -0.51
PFKM-220ENST00000550802 FBLN1P23142 703 aa11.85□□□□□ -0.51
PFKM-220ENST00000550802 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
PFKM-220ENST00000550802 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
PFKM-220ENST00000550802 GNAI1P63096 354 aa11.85□□□□□ -0.51
PFKM-220ENST00000550802 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
PFKM-220ENST00000550802 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
PFKM-220ENST00000550802 RGS12O14924 1447 aa11.85□□□□□ -0.51
PFKM-220ENST00000550802 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
PFKM-220ENST00000550802 MAP3K19Q56UN5 1328 aa11.85□□□□□ -0.51
PFKM-220ENST00000550802 BCAR3O75815 825 aa11.84□□□□□ -0.51
PFKM-220ENST00000550802 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
PFKM-220ENST00000550802 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
PFKM-220ENST00000550802 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
PFKM-220ENST00000550802 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
PFKM-220ENST00000550802 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
PFKM-220ENST00000550802 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
PFKM-220ENST00000550802 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
PFKM-220ENST00000550802 SOX12O15370 315 aa11.82□□□□□ -0.52
PFKM-220ENST00000550802 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
PFKM-220ENST00000550802 ADAMTS2O95450 1211 aa11.82□□□□□ -0.52
PFKM-220ENST00000550802 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
PFKM-220ENST00000550802 FNBP4Q8N3X1 1017 aaPredicted RBP11.82□□□□□ -0.52
PFKM-220ENST00000550802 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
PFKM-220ENST00000550802 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
PFKM-220ENST00000550802 TCERG1O14776 1098 aaKnown RBP11.81□□□□□ -0.52
PFKM-220ENST00000550802 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 C20orf194Q5TEA3 1177 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
PFKM-220ENST00000550802 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 SMC4Q9NTJ3 1288 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 USP21Q9UK80 565 aa11.81□□□□□ -0.52
PFKM-220ENST00000550802 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
PFKM-220ENST00000550802 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
PFKM-220ENST00000550802 KDRP35968 1356 aa11.8□□□□□ -0.52
PFKM-220ENST00000550802 LTN1O94822 1766 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms