RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 NALCNQ8IZF0 1738 aa14.2□□□□□ -0.14
LINC00661-204ENST00000549354 SOX12O15370 315 aa14.2□□□□□ -0.14
LINC00661-204ENST00000549354 KCNA6P17658 529 aa14.2□□□□□ -0.14
LINC00661-204ENST00000549354 NME9Q86XW9 330 aa14.2□□□□□ -0.14
LINC00661-204ENST00000549354 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
LINC00661-204ENST00000549354 ACEP12821 1306 aa14.2□□□□□ -0.14
LINC00661-204ENST00000549354 WDR63Q8IWG1 891 aa14.19□□□□□ -0.14
LINC00661-204ENST00000549354 OVOS2A0A0J9YW53 1432 aa14.19□□□□□ -0.14
LINC00661-204ENST00000549354 OVOS2Q6IE36 1432 aa14.19□□□□□ -0.14
LINC00661-204ENST00000549354 TTC21BQ7Z4L5 1316 aa14.19□□□□□ -0.14
LINC00661-204ENST00000549354 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
LINC00661-204ENST00000549354 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
LINC00661-204ENST00000549354 DIAPH1O60610 1272 aaKnown RBP14.18□□□□□ -0.14
LINC00661-204ENST00000549354 NWD1Q149M9 1564 aa14.17□□□□□ -0.14
LINC00661-204ENST00000549354 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
LINC00661-204ENST00000549354 COG3Q96JB2 828 aa14.17□□□□□ -0.14
LINC00661-204ENST00000549354 USP54Q70EL1 1684 aa14.17□□□□□ -0.14
LINC00661-204ENST00000549354 RGPD8O14715 1765 aaPredicted RBP14.16□□□□□ -0.14
LINC00661-204ENST00000549354 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
LINC00661-204ENST00000549354 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
LINC00661-204ENST00000549354 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
LINC00661-204ENST00000549354 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
LINC00661-204ENST00000549354 LRRC7Q96NW7 1537 aa14.15□□□□□ -0.14
LINC00661-204ENST00000549354 FCHSD2O94868 740 aa14.15□□□□□ -0.14
LINC00661-204ENST00000549354 IL13P35225 146 aa14.14□□□□□ -0.15
LINC00661-204ENST00000549354 APBB1O00213 710 aa14.13□□□□□ -0.15
LINC00661-204ENST00000549354 RLBP1P12271 317 aa14.13□□□□□ -0.15
LINC00661-204ENST00000549354 MFAP1P55081 439 aaKnown RBP14.13□□□□□ -0.15
LINC00661-204ENST00000549354 FTSJ3Q8IY81 847 aaKnown RBP14.12□□□□□ -0.15
LINC00661-204ENST00000549354 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
LINC00661-204ENST00000549354 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
LINC00661-204ENST00000549354 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
LINC00661-204ENST00000549354 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
LINC00661-204ENST00000549354 TMPOP42166 694 aaKnown RBP14.12□□□□□ -0.15
LINC00661-204ENST00000549354 IL16Q14005 1332 aa14.11□□□□□ -0.15
LINC00661-204ENST00000549354 PIK3C2AO00443 1686 aa14.11□□□□□ -0.15
LINC00661-204ENST00000549354 TRIM35Q9UPQ4 493 aa14.1□□□□□ -0.15
LINC00661-204ENST00000549354 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
LINC00661-204ENST00000549354 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
LINC00661-204ENST00000549354 PEAK1Q9H792 1746 aa14.09□□□□□ -0.15
LINC00661-204ENST00000549354 THUMPD2Q9BTF0 503 aaKnown RBP14.09□□□□□ -0.15
LINC00661-204ENST00000549354 RGPD1P0DJD0 1748 aa14.09□□□□□ -0.15
LINC00661-204ENST00000549354 C1orf115Q9H7X2 142 aa14.08□□□□□ -0.16
LINC00661-204ENST00000549354 PCDHB15Q9Y5E8 787 aa14.08□□□□□ -0.16
LINC00661-204ENST00000549354 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
LINC00661-204ENST00000549354 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
LINC00661-204ENST00000549354 MYH16Q9H6N6 1097 aa14.07□□□□□ -0.16
LINC00661-204ENST00000549354 NGDNQ8NEJ9 315 aaKnown RBP14.07□□□□□ -0.16
LINC00661-204ENST00000549354 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
LINC00661-204ENST00000549354 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
LINC00661-204ENST00000549354 RRS1Q15050 365 aaKnown RBP14.06□□□□□ -0.16
LINC00661-204ENST00000549354 HMOX1P09601 288 aa14.06□□□□□ -0.16
LINC00661-204ENST00000549354 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
LINC00661-204ENST00000549354 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
LINC00661-204ENST00000549354 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
LINC00661-204ENST00000549354 USP19O94966 1318 aa14.04□□□□□ -0.16
LINC00661-204ENST00000549354 RIPK4P57078 832 aa14.04□□□□□ -0.16
LINC00661-204ENST00000549354 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
LINC00661-204ENST00000549354 SBNO1A3KN83 1393 aa14.03□□□□□ -0.16
LINC00661-204ENST00000549354 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
LINC00661-204ENST00000549354 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
LINC00661-204ENST00000549354 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
LINC00661-204ENST00000549354 RARSP54136 660 aaKnown RBP14.03□□□□□ -0.16
LINC00661-204ENST00000549354 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
LINC00661-204ENST00000549354 PHACTR3Q96KR7 559 aa14.02□□□□□ -0.16
LINC00661-204ENST00000549354 LNPKQ9C0E8 428 aa14.02□□□□□ -0.16
LINC00661-204ENST00000549354 ZBTB7CA1YPR0 619 aa14.02□□□□□ -0.17
LINC00661-204ENST00000549354 PDE3AQ14432 1141 aa14.02□□□□□ -0.17
LINC00661-204ENST00000549354 BECN1Q14457 450 aa14.02□□□□□ -0.17
LINC00661-204ENST00000549354 UPF2Q9HAU5 1272 aaKnown RBP14.02□□□□□ -0.17
LINC00661-204ENST00000549354 MAP3K19Q56UN5 1328 aa14.01□□□□□ -0.17
LINC00661-204ENST00000549354 FLT4P35916 1363 aa14.01□□□□□ -0.17
LINC00661-204ENST00000549354 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
LINC00661-204ENST00000549354 HSP90AA1P07900 732 aaKnown RBP14□□□□□ -0.17
LINC00661-204ENST00000549354 MST1RQ04912 1400 aa14□□□□□ -0.17
LINC00661-204ENST00000549354 ZNF428Q96B54 188 aa13.99□□□□□ -0.17
LINC00661-204ENST00000549354 DLG5Q8TDM6 1919 aa13.99□□□□□ -0.17
LINC00661-204ENST00000549354 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
LINC00661-204ENST00000549354 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
LINC00661-204ENST00000549354 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
LINC00661-204ENST00000549354 HSP90AB2PQ58FF8 381 aa13.98□□□□□ -0.17
LINC00661-204ENST00000549354 KDRP35968 1356 aa13.98□□□□□ -0.17
LINC00661-204ENST00000549354 DCCP43146 1447 aa13.98□□□□□ -0.17
LINC00661-204ENST00000549354 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
LINC00661-204ENST00000549354 CALD1Q05682 793 aaKnown RBP13.98□□□□□ -0.17
LINC00661-204ENST00000549354 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
LINC00661-204ENST00000549354 NFAT5O94916 1531 aa13.98□□□□□ -0.17
LINC00661-204ENST00000549354 RTL1A6NKG5 1358 aa13.97□□□□□ -0.17
LINC00661-204ENST00000549354 NLRP6P59044 892 aa13.97□□□□□ -0.17
LINC00661-204ENST00000549354 TRPM3Q9HCF6 1732 aaPredicted RBP13.97□□□□□ -0.17
LINC00661-204ENST00000549354 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
LINC00661-204ENST00000549354 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
LINC00661-204ENST00000549354 DCTN1Q14203 1278 aa13.96□□□□□ -0.18
LINC00661-204ENST00000549354 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.18
LINC00661-204ENST00000549354 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.18
LINC00661-204ENST00000549354 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
LINC00661-204ENST00000549354 AAMPQ13685 434 aa13.95□□□□□ -0.18
LINC00661-204ENST00000549354 FOXD4L5Q5VV16 416 aaPredicted RBP13.95□□□□□ -0.18
LINC00661-204ENST00000549354 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
LINC00661-204ENST00000549354 FOXD4L4Q8WXT5 416 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms