RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 GRPEL1Q9HAV7 217 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
SMARCD1-205ENST00000548573 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
SMARCD1-205ENST00000548573 ABCC4O15439 1325 aa12.33□□□□□ -0.44
SMARCD1-205ENST00000548573 GNAI1P63096 354 aa12.33□□□□□ -0.44
SMARCD1-205ENST00000548573 CABP1Q9NZU7 370 aa12.33□□□□□ -0.44
SMARCD1-205ENST00000548573 POLKQ9UBT6 870 aa12.33□□□□□ -0.44
SMARCD1-205ENST00000548573 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
SMARCD1-205ENST00000548573 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
SMARCD1-205ENST00000548573 ARXQ96QS3 562 aa12.32□□□□□ -0.44
SMARCD1-205ENST00000548573 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
SMARCD1-205ENST00000548573 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
SMARCD1-205ENST00000548573 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
SMARCD1-205ENST00000548573 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
SMARCD1-205ENST00000548573 K7ELQ4 463 aaPredicted RBP12.31□□□□□ -0.44
SMARCD1-205ENST00000548573 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
SMARCD1-205ENST00000548573 SIRT2Q8IXJ6 389 aa12.3□□□□□ -0.44
SMARCD1-205ENST00000548573 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
SMARCD1-205ENST00000548573 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
SMARCD1-205ENST00000548573 CDK12Q9NYV4 1490 aaPredicted RBP12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 MAP2P11137 1827 aaKnown RBP12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 CDC45O75419 566 aa12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
SMARCD1-205ENST00000548573 HSP90AA1P07900 732 aaKnown RBP12.28□□□□□ -0.44
SMARCD1-205ENST00000548573 IL13P35225 146 aa12.28□□□□□ -0.44
SMARCD1-205ENST00000548573 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
SMARCD1-205ENST00000548573 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
SMARCD1-205ENST00000548573 AATKQ6ZMQ8 1374 aa12.28□□□□□ -0.44
SMARCD1-205ENST00000548573 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
SMARCD1-205ENST00000548573 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-205ENST00000548573 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-205ENST00000548573 HMOX1P09601 288 aa12.27□□□□□ -0.45
SMARCD1-205ENST00000548573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMARCD1-205ENST00000548573 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-205ENST00000548573 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
SMARCD1-205ENST00000548573 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
SMARCD1-205ENST00000548573 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
SMARCD1-205ENST00000548573 ESPNB1AK53 854 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 FBLN1P23142 703 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 RABEP1Q15276 862 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
SMARCD1-205ENST00000548573 SETD1AO15047 1707 aaKnown RBP12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 RIMBP3CA6NJZ7 1639 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 RIMBP3BA6NNM3 1639 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 RIMBP3Q9UFD9 1639 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 C8orf58Q8NAV2 365 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
SMARCD1-205ENST00000548573 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 SSFA2P28290 1259 aa12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
SMARCD1-205ENST00000548573 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 NUCB2P80303 420 aa12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
SMARCD1-205ENST00000548573 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.45
SMARCD1-205ENST00000548573 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
SMARCD1-205ENST00000548573 WASLO00401 505 aaPredicted RBP12.21□□□□□ -0.45
SMARCD1-205ENST00000548573 CCDC173Q0VFZ6 552 aa12.21□□□□□ -0.45
SMARCD1-205ENST00000548573 USP26Q9BXU7 913 aa12.21□□□□□ -0.45
SMARCD1-205ENST00000548573 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
SMARCD1-205ENST00000548573 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
SMARCD1-205ENST00000548573 NME9Q86XW9 330 aa12.2□□□□□ -0.46
SMARCD1-205ENST00000548573 COG3Q96JB2 828 aa12.2□□□□□ -0.46
SMARCD1-205ENST00000548573 PPP1R9BQ96SB3 815 aa12.2□□□□□ -0.46
SMARCD1-205ENST00000548573 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
SMARCD1-205ENST00000548573 NRKQ7Z2Y5 1582 aa12.2□□□□□ -0.46
SMARCD1-205ENST00000548573 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
SMARCD1-205ENST00000548573 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
SMARCD1-205ENST00000548573 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
SMARCD1-205ENST00000548573 RGS12O14924 1447 aa12.19□□□□□ -0.46
SMARCD1-205ENST00000548573 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 CASC1Q6TDU7 716 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 C3P01024 1663 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
SMARCD1-205ENST00000548573 PTPRCP08575 1304 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms