RNA–Protein interactions for RNA: ENST00000546146.5

LDHC-210, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 701 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-210ENST00000546146 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
LDHC-210ENST00000546146 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
LDHC-210ENST00000546146 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
LDHC-210ENST00000546146 MSH6P52701 1360 aa13.58□□□□□ -0.23
LDHC-210ENST00000546146 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
LDHC-210ENST00000546146 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
LDHC-210ENST00000546146 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
LDHC-210ENST00000546146 FCHSD2O94868 740 aa13.57□□□□□ -0.24
LDHC-210ENST00000546146 FKBP8Q14318 412 aa13.57□□□□□ -0.24
LDHC-210ENST00000546146 DCCP43146 1447 aa13.56□□□□□ -0.24
LDHC-210ENST00000546146 RRS1Q15050 365 aaKnown RBP13.56□□□□□ -0.24
LDHC-210ENST00000546146 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
LDHC-210ENST00000546146 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
LDHC-210ENST00000546146 NRKQ7Z2Y5 1582 aa13.56□□□□□ -0.24
LDHC-210ENST00000546146 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
LDHC-210ENST00000546146 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
LDHC-210ENST00000546146 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
LDHC-210ENST00000546146 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
LDHC-210ENST00000546146 AMPHP49418 695 aa13.55□□□□□ -0.24
LDHC-210ENST00000546146 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
LDHC-210ENST00000546146 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
LDHC-210ENST00000546146 E9PSI1 815 aa13.54□□□□□ -0.24
LDHC-210ENST00000546146 SOX12O15370 315 aa13.54□□□□□ -0.24
LDHC-210ENST00000546146 FOXO3O43524 673 aa13.54□□□□□ -0.24
LDHC-210ENST00000546146 FBLN1P23142 703 aa13.54□□□□□ -0.24
LDHC-210ENST00000546146 KCNH5Q8NCM2 988 aa13.54□□□□□ -0.24
LDHC-210ENST00000546146 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
LDHC-210ENST00000546146 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
LDHC-210ENST00000546146 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
LDHC-210ENST00000546146 IL13P35225 146 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 CCDC27Q2M243 656 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
LDHC-210ENST00000546146 NUTM2GQ5VZR2 741 aa13.52□□□□□ -0.25
LDHC-210ENST00000546146 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
LDHC-210ENST00000546146 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
LDHC-210ENST00000546146 STRCQ7RTU9 1775 aa13.52□□□□□ -0.25
LDHC-210ENST00000546146 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 ZNF521Q96K83 1311 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 SLFN5Q08AF3 891 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 WWC1Q8IX03 1113 aa13.51□□□□□ -0.25
LDHC-210ENST00000546146 FLT4P35916 1363 aa13.5□□□□□ -0.25
LDHC-210ENST00000546146 MAP3K19Q56UN5 1328 aa13.5□□□□□ -0.25
LDHC-210ENST00000546146 TMPOP42166 694 aaKnown RBP13.5□□□□□ -0.25
LDHC-210ENST00000546146 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
LDHC-210ENST00000546146 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
LDHC-210ENST00000546146 NPHP3Q7Z494 1330 aa13.49□□□□□ -0.25
LDHC-210ENST00000546146 ZNF335Q9H4Z2 1342 aaPredicted RBP13.49□□□□□ -0.25
LDHC-210ENST00000546146 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
LDHC-210ENST00000546146 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
LDHC-210ENST00000546146 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
LDHC-210ENST00000546146 MYH16Q9H6N6 1097 aa13.49□□□□□ -0.25
LDHC-210ENST00000546146 MST1RQ04912 1400 aa13.48□□□□□ -0.25
LDHC-210ENST00000546146 HMOX1P09601 288 aa13.48□□□□□ -0.25
LDHC-210ENST00000546146 RIPK4P57078 832 aa13.48□□□□□ -0.25
LDHC-210ENST00000546146 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
LDHC-210ENST00000546146 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
LDHC-210ENST00000546146 EIF4A2Q14240 407 aaKnown RBP13.48□□□□□ -0.25
LDHC-210ENST00000546146 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
LDHC-210ENST00000546146 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
LDHC-210ENST00000546146 XPCQ01831 940 aaPredicted RBP13.47□□□□□ -0.25
LDHC-210ENST00000546146 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
LDHC-210ENST00000546146 DUSP27Q5VZP5 1158 aa13.47□□□□□ -0.25
LDHC-210ENST00000546146 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
LDHC-210ENST00000546146 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
LDHC-210ENST00000546146 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
LDHC-210ENST00000546146 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
LDHC-210ENST00000546146 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.25
LDHC-210ENST00000546146 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
LDHC-210ENST00000546146 SLAIN2Q9P270 581 aa13.46□□□□□ -0.25
LDHC-210ENST00000546146 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
LDHC-210ENST00000546146 HOXC9P31274 260 aa13.45□□□□□ -0.26
LDHC-210ENST00000546146 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
LDHC-210ENST00000546146 IL16Q14005 1332 aa13.44□□□□□ -0.26
LDHC-210ENST00000546146 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
LDHC-210ENST00000546146 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
LDHC-210ENST00000546146 GCP02774 474 aa13.44□□□□□ -0.26
LDHC-210ENST00000546146 IP6K1Q92551 441 aa13.44□□□□□ -0.26
LDHC-210ENST00000546146 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
LDHC-210ENST00000546146 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
LDHC-210ENST00000546146 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
LDHC-210ENST00000546146 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
LDHC-210ENST00000546146 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
LDHC-210ENST00000546146 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
LDHC-210ENST00000546146 LTV1Q96GA3 475 aaPredicted RBP13.41□□□□□ -0.26
LDHC-210ENST00000546146 PHACTR3Q96KR7 559 aa13.41□□□□□ -0.26
LDHC-210ENST00000546146 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
LDHC-210ENST00000546146 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
LDHC-210ENST00000546146 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
LDHC-210ENST00000546146 EYA1Q99502 592 aa13.4□□□□□ -0.26
LDHC-210ENST00000546146 USP19O94966 1318 aa13.39□□□□□ -0.27
LDHC-210ENST00000546146 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
LDHC-210ENST00000546146 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
LDHC-210ENST00000546146 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms