RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 C16orf71Q8IYS4 520 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-206ENST00000544455 SLC4A10Q6U841 1118 aa4.78□□□□□ -1.64
BRCA2-206ENST00000544455 PUS7Q96PZ0 661 aaKnown RBP4.78□□□□□ -1.64
BRCA2-206ENST00000544455 KCNA6P17658 529 aa4.78□□□□□ -1.64
BRCA2-206ENST00000544455 KIAA1210Q9ULL0 1709 aa4.78□□□□□ -1.64
BRCA2-206ENST00000544455 MTHFSDQ2M296 383 aaKnown RBP4.78□□□□□ -1.64
BRCA2-206ENST00000544455 DDX19BQ9UMR2 479 aa4.78□□□□□ -1.64
BRCA2-206ENST00000544455 VAMP4O75379 141 aa4.78□□□□□ -1.64
BRCA2-206ENST00000544455 AMPHP49418 695 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 PNPLA6Q8IY17 1366 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 LRRC7Q96NW7 1537 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 EID1Q9Y6B2 187 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 CPSF1Q10570 1443 aaKnown RBP4.77□□□□□ -1.65
BRCA2-206ENST00000544455 HDGFP51858 240 aaKnown RBP4.77□□□□□ -1.65
BRCA2-206ENST00000544455 NLRP6P59044 892 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 MRPL50Q8N5N7 158 aaKnown RBP4.77□□□□□ -1.65
BRCA2-206ENST00000544455 ADAMTS13Q76LX8 1427 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 NINLQ9Y2I6 1382 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 FAM135BQ49AJ0 1406 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 EDC4Q6P2E9 1401 aaKnown RBP4.77□□□□□ -1.65
BRCA2-206ENST00000544455 SMARCA5O60264 1052 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-206ENST00000544455 G2E3Q7L622 706 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 DDRGK1Q96HY6 314 aa4.77□□□□□ -1.65
BRCA2-206ENST00000544455 SPATA31D1Q6ZQQ2 1576 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 NGEFQ8N5V2 710 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 ZBTB40Q9NUA8 1239 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 MED14O60244 1454 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 GNAI1P63096 354 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 ZNF692Q9BU19 519 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-206ENST00000544455 MAP3K19Q56UN5 1328 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 ZBTB7BO15156 539 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-206ENST00000544455 EYA1Q99502 592 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 DDX17Q92841 729 aaKnown RBP4.76□□□□□ -1.65
BRCA2-206ENST00000544455 CFAP65Q6ZU64 1925 aaKnown RBP4.76□□□□□ -1.65
BRCA2-206ENST00000544455 OTUD7AQ8TE49 926 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-206ENST00000544455 LRRC59Q96AG4 307 aaKnown RBP4.76□□□□□ -1.65
BRCA2-206ENST00000544455 SLC4A2P04920 1241 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 ESCO1Q5FWF5 840 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 SIRT2Q8IXJ6 389 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 PPP6R1Q9UPN7 881 aa4.76□□□□□ -1.65
BRCA2-206ENST00000544455 TSHZ3Q63HK5 1081 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 ABTB2Q8N961 1025 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 ATP7BP35670 1465 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 IL27Q8NEV9 243 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 MEIS3Q99687 375 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 PNNQ9H307 717 aaKnown RBP4.75□□□□□ -1.65
BRCA2-206ENST00000544455 IFT57Q9NWB7 429 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 DLC1Q96QB1 1528 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 CHD1LQ86WJ1 897 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 CFAP44Q96MT7 982 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 RBM42Q9BTD8 480 aaKnown RBP4.75□□□□□ -1.65
BRCA2-206ENST00000544455 GZF1Q9H116 711 aaPredicted RBP4.75□□□□□ -1.65
BRCA2-206ENST00000544455 KIF16BQ96L93 1317 aa4.75□□□□□ -1.65
BRCA2-206ENST00000544455 IPO8O15397 1037 aaKnown RBP4.74□□□□□ -1.65
BRCA2-206ENST00000544455 TBC1D2Q9BYX2 928 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 EIF2S2P20042 333 aaKnown RBP4.74□□□□□ -1.65
BRCA2-206ENST00000544455 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 ANXA1P04083 346 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 ORAI2Q96SN7 254 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 ZNF853P0CG23 659 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 IL16Q14005 1332 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 UPF2Q9HAU5 1272 aaKnown RBP4.74□□□□□ -1.65
BRCA2-206ENST00000544455 ADGRB2O60241 1585 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 NUCB1Q02818 461 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
BRCA2-206ENST00000544455 ALDH1L2Q3SY69 923 aa4.74□□□□□ -1.65
BRCA2-206ENST00000544455 PHAXQ9H814 394 aaKnown RBP4.74□□□□□ -1.65
BRCA2-206ENST00000544455 USP6P35125 1406 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 MSH6P52701 1360 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 USP32Q8NFA0 1604 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 PLEKHG1Q9ULL1 1385 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 AGLP35573 1532 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 C22orf23Q9BZE7 217 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 LGR6Q9HBX8 967 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 HOXC9P31274 260 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 THEMISQ8N1K5 641 aaPredicted RBP4.73□□□□□ -1.65
BRCA2-206ENST00000544455 PRAMEF22A3QJZ6 481 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 KCNQ3O43525 872 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 NRXN3Q9Y4C0 1643 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 MAP4K4O95819 1239 aaPredicted RBP4.73□□□□□ -1.65
BRCA2-206ENST00000544455 TBC1D32Q96NH3 1257 aa4.73□□□□□ -1.65
BRCA2-206ENST00000544455 CD2BP2O95400 341 aaKnown RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 HDAC1Q13547 482 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 BRPF3Q9ULD4 1205 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 DTNBO60941 627 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 PIP4K2AP48426 406 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 SMC5Q8IY18 1101 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 PLEKHG3A1L390 1219 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 CT47B1P0C2W7 299 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 FKBP5Q13451 457 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 MYO5BQ9ULV0 1848 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 MPRIPQ6WCQ1 1025 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 AATKQ6ZMQ8 1374 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 ZC3H6P61129 1189 aaKnown RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 NOL8Q76FK4 1167 aaKnown RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 CDC42BPGQ6DT37 1551 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 EXOC6BQ9Y2D4 811 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 GSPT1P15170 499 aaKnown RBP4.72□□□□□ -1.65
BRCA2-206ENST00000544455 CABLES1Q8TDN4 633 aa4.72□□□□□ -1.65
BRCA2-206ENST00000544455 NBPF6Q5VWK0 638 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms