RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
PTCD2-212ENST00000543322 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
PTCD2-212ENST00000543322 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.19
PTCD2-212ENST00000543322 A2ML1A8K2U0 1454 aa16.21■□□□□ 0.19
PTCD2-212ENST00000543322 ZNF853P0CG23 659 aa16.21■□□□□ 0.18
PTCD2-212ENST00000543322 NRXN3Q9Y4C0 1643 aa16.2■□□□□ 0.18
PTCD2-212ENST00000543322 GNAI1P63096 354 aa16.2■□□□□ 0.18
PTCD2-212ENST00000543322 PHACTR3Q96KR7 559 aa16.2■□□□□ 0.18
PTCD2-212ENST00000543322 AATKQ6ZMQ8 1374 aa16.2■□□□□ 0.18
PTCD2-212ENST00000543322 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
PTCD2-212ENST00000543322 TRAK2O60296 914 aa16.19■□□□□ 0.18
PTCD2-212ENST00000543322 XRCC6P12956 609 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTCD2-212ENST00000543322 FBXO31Q5XUX0 539 aaPredicted RBP16.19■□□□□ 0.18
PTCD2-212ENST00000543322 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
PTCD2-212ENST00000543322 NRKQ7Z2Y5 1582 aa16.19■□□□□ 0.18
PTCD2-212ENST00000543322 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTCD2-212ENST00000543322 AGLP35573 1532 aa16.19■□□□□ 0.18
PTCD2-212ENST00000543322 AKAP12Q02952 1782 aa16.19■□□□□ 0.18
PTCD2-212ENST00000543322 IL13P35225 146 aa16.18■□□□□ 0.18
PTCD2-212ENST00000543322 C3P01024 1663 aa16.18■□□□□ 0.18
PTCD2-212ENST00000543322 TSPYL6Q8N831 410 aa16.18■□□□□ 0.18
PTCD2-212ENST00000543322 KIF2CQ99661 725 aa16.18■□□□□ 0.18
PTCD2-212ENST00000543322 KIF24Q5T7B8 1368 aa16.17■□□□□ 0.18
PTCD2-212ENST00000543322 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
PTCD2-212ENST00000543322 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
PTCD2-212ENST00000543322 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
PTCD2-212ENST00000543322 HMOX1P09601 288 aa16.16■□□□□ 0.18
PTCD2-212ENST00000543322 FBLN1P23142 703 aa16.16■□□□□ 0.18
PTCD2-212ENST00000543322 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
PTCD2-212ENST00000543322 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
PTCD2-212ENST00000543322 SIRT2Q8IXJ6 389 aa16.16■□□□□ 0.18
PTCD2-212ENST00000543322 RRAGDQ9NQL2 400 aaPredicted RBP16.16■□□□□ 0.18
PTCD2-212ENST00000543322 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
PTCD2-212ENST00000543322 CPS1P31327 1500 aa16.15■□□□□ 0.18
PTCD2-212ENST00000543322 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
PTCD2-212ENST00000543322 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
PTCD2-212ENST00000543322 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
PTCD2-212ENST00000543322 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
PTCD2-212ENST00000543322 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
PTCD2-212ENST00000543322 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
PTCD2-212ENST00000543322 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
PTCD2-212ENST00000543322 RAB3GAP1Q15042 981 aa16.14■□□□□ 0.17
PTCD2-212ENST00000543322 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
PTCD2-212ENST00000543322 MRE11P49959 708 aa16.13■□□□□ 0.17
PTCD2-212ENST00000543322 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
PTCD2-212ENST00000543322 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
PTCD2-212ENST00000543322 API5Q9BZZ5 524 aaKnown RBP16.13■□□□□ 0.17
PTCD2-212ENST00000543322 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
PTCD2-212ENST00000543322 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
PTCD2-212ENST00000543322 NME9Q86XW9 330 aa16.12■□□□□ 0.17
PTCD2-212ENST00000543322 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
PTCD2-212ENST00000543322 WASLO00401 505 aaPredicted RBP16.11■□□□□ 0.17
PTCD2-212ENST00000543322 TECPR2O15040 1411 aa16.11■□□□□ 0.17
PTCD2-212ENST00000543322 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
PTCD2-212ENST00000543322 CDC45O75419 566 aa16.11■□□□□ 0.17
PTCD2-212ENST00000543322 PTMSP20962 102 aa16.11■□□□□ 0.17
PTCD2-212ENST00000543322 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
PTCD2-212ENST00000543322 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
PTCD2-212ENST00000543322 CD2BP2O95400 341 aaKnown RBP16.1■□□□□ 0.17
PTCD2-212ENST00000543322 RGS12O14924 1447 aa16.1■□□□□ 0.17
PTCD2-212ENST00000543322 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
PTCD2-212ENST00000543322 ARXQ96QS3 562 aa16.09■□□□□ 0.17
PTCD2-212ENST00000543322 GRPEL1Q9HAV7 217 aa16.09■□□□□ 0.17
PTCD2-212ENST00000543322 ZRANB1Q9UGI0 708 aa16.09■□□□□ 0.17
PTCD2-212ENST00000543322 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
PTCD2-212ENST00000543322 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
PTCD2-212ENST00000543322 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
PTCD2-212ENST00000543322 DIP2BQ9P265 1576 aa16.08■□□□□ 0.16
PTCD2-212ENST00000543322 COG3Q96JB2 828 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 RGPD1P0DJD0 1748 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 TOPAZ1Q8N9V7 1692 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 NALCNQ8IZF0 1738 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
PTCD2-212ENST00000543322 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
PTCD2-212ENST00000543322 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 DCTPP1Q9H773 170 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 METP08581 1390 aa16.07■□□□□ 0.16
PTCD2-212ENST00000543322 FAM83GA6ND36 823 aa16.06■□□□□ 0.16
PTCD2-212ENST00000543322 CLEC17AQ6ZS10 378 aa16.06■□□□□ 0.16
PTCD2-212ENST00000543322 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
PTCD2-212ENST00000543322 CLCN1P35523 988 aa16.05■□□□□ 0.16
PTCD2-212ENST00000543322 TTC22Q5TAA0 569 aa16.05■□□□□ 0.16
PTCD2-212ENST00000543322 SIRT1Q96EB6 747 aa16.05■□□□□ 0.16
PTCD2-212ENST00000543322 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
PTCD2-212ENST00000543322 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
PTCD2-212ENST00000543322 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
PTCD2-212ENST00000543322 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
PTCD2-212ENST00000543322 ANKRD44Q8N8A2 993 aa16.04■□□□□ 0.16
PTCD2-212ENST00000543322 PEAK1Q9H792 1746 aa16.03■□□□□ 0.16
PTCD2-212ENST00000543322 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
PTCD2-212ENST00000543322 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
PTCD2-212ENST00000543322 PRKCSHP14314 528 aaPredicted RBP16.02■□□□□ 0.16
PTCD2-212ENST00000543322 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
PTCD2-212ENST00000543322 RABEP1Q15276 862 aa16.02■□□□□ 0.16
PTCD2-212ENST00000543322 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTCD2-212ENST00000543322 OVOS2A0A0J9YW53 1432 aa16.02■□□□□ 0.16
PTCD2-212ENST00000543322 OVOS2Q6IE36 1432 aa16.02■□□□□ 0.16
PTCD2-212ENST00000543322 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.15
PTCD2-212ENST00000543322 MSH6P52701 1360 aa16.01■□□□□ 0.15
PTCD2-212ENST00000543322 SSFA2P28290 1259 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms