RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MCM10Q7L590 875 aa19.03■□□□□ 0.64
CNOT9-208ENST00000542068 LMTK2Q8IWU2 1503 aa19.03■□□□□ 0.64
CNOT9-208ENST00000542068 C16orf71Q8IYS4 520 aaPredicted RBP19.03■□□□□ 0.64
CNOT9-208ENST00000542068 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
CNOT9-208ENST00000542068 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
CNOT9-208ENST00000542068 DDX49Q9Y6V7 483 aaKnown RBP19.03■□□□□ 0.64
CNOT9-208ENST00000542068 KIAA1210Q9ULL0 1709 aa19.02■□□□□ 0.64
CNOT9-208ENST00000542068 SLC4A10Q6U841 1118 aa19.02■□□□□ 0.64
CNOT9-208ENST00000542068 TSPOAP1O95153 1857 aa19.02■□□□□ 0.64
CNOT9-208ENST00000542068 CLCN1P35523 988 aa19.02■□□□□ 0.64
CNOT9-208ENST00000542068 RBM25P49756 843 aaKnown RBP19.02■□□□□ 0.64
CNOT9-208ENST00000542068 MBIPQ9NS73 344 aa19.02■□□□□ 0.64
CNOT9-208ENST00000542068 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
CNOT9-208ENST00000542068 ZBTB7BO15156 539 aaPredicted RBP19.01■□□□□ 0.63
CNOT9-208ENST00000542068 C8orf58Q8NAV2 365 aa19.01■□□□□ 0.63
CNOT9-208ENST00000542068 KIF2CQ99661 725 aa19.01■□□□□ 0.63
CNOT9-208ENST00000542068 NEO1Q92859 1461 aa19■□□□□ 0.63
CNOT9-208ENST00000542068 K7ELQ4 463 aaPredicted RBP19■□□□□ 0.63
CNOT9-208ENST00000542068 TPRNQ4KMQ1 711 aa19■□□□□ 0.63
CNOT9-208ENST00000542068 CHAMP1Q96JM3 812 aa19■□□□□ 0.63
CNOT9-208ENST00000542068 BMP2KLQ5H9B9 411 aa18.99■□□□□ 0.63
CNOT9-208ENST00000542068 MCTP1Q6DN14 999 aa18.99■□□□□ 0.63
CNOT9-208ENST00000542068 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
CNOT9-208ENST00000542068 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
CNOT9-208ENST00000542068 GNAI1P63096 354 aa18.99■□□□□ 0.63
CNOT9-208ENST00000542068 NGDNQ8NEJ9 315 aaKnown RBP18.99■□□□□ 0.63
CNOT9-208ENST00000542068 NEXMIFQ5QGS0 1516 aa18.99■□□□□ 0.63
CNOT9-208ENST00000542068 RIMS2Q9UQ26 1411 aa18.99■□□□□ 0.63
CNOT9-208ENST00000542068 VAMP4O75379 141 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 RAB3GAP1Q15042 981 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 SETBP1Q9Y6X0 1596 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 CAMSAP1Q5T5Y3 1602 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 PPLO60437 1756 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
CNOT9-208ENST00000542068 HSP90AB2PQ58FF8 381 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 OTUD7AQ8TE49 926 aaPredicted RBP18.98■□□□□ 0.63
CNOT9-208ENST00000542068 METP08581 1390 aa18.98■□□□□ 0.63
CNOT9-208ENST00000542068 PPIP5K1Q6PFW1 1433 aa18.97■□□□□ 0.63
CNOT9-208ENST00000542068 HSP90AA2PQ14568 343 aaPredicted RBP18.97■□□□□ 0.63
CNOT9-208ENST00000542068 SNX21Q969T3 373 aa18.97■□□□□ 0.63
CNOT9-208ENST00000542068 DIP2CQ9Y2E4 1556 aa18.97■□□□□ 0.63
CNOT9-208ENST00000542068 GOLGA6L22H0YM25 854 aa18.97■□□□□ 0.63
CNOT9-208ENST00000542068 MRPL50Q8N5N7 158 aaKnown RBP18.97■□□□□ 0.63
CNOT9-208ENST00000542068 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
CNOT9-208ENST00000542068 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
CNOT9-208ENST00000542068 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
CNOT9-208ENST00000542068 PKP1Q13835 747 aa18.96■□□□□ 0.63
CNOT9-208ENST00000542068 CAVIN1Q6NZI2 390 aaKnown RBP18.95■□□□□ 0.62
CNOT9-208ENST00000542068 NOL8Q76FK4 1167 aaKnown RBP18.95■□□□□ 0.62
CNOT9-208ENST00000542068 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
CNOT9-208ENST00000542068 CALD1Q05682 793 aaKnown RBP18.95■□□□□ 0.62
CNOT9-208ENST00000542068 ALDH1L2Q3SY69 923 aa18.95■□□□□ 0.62
CNOT9-208ENST00000542068 NASPP49321 788 aaPredicted RBP18.94■□□□□ 0.62
CNOT9-208ENST00000542068 GCC1Q96CN9 775 aa18.94■□□□□ 0.62
CNOT9-208ENST00000542068 DDIT3P35638 169 aa18.94■□□□□ 0.62
CNOT9-208ENST00000542068 FOXD4L6Q3SYB3 417 aaPredicted RBP18.94■□□□□ 0.62
CNOT9-208ENST00000542068 FOXD4L3Q6VB84 417 aaPredicted RBP18.94■□□□□ 0.62
CNOT9-208ENST00000542068 IL16Q14005 1332 aa18.94■□□□□ 0.62
CNOT9-208ENST00000542068 CDC45O75419 566 aa18.94■□□□□ 0.62
CNOT9-208ENST00000542068 GSPT1P15170 499 aaKnown RBP18.94■□□□□ 0.62
CNOT9-208ENST00000542068 AMPHP49418 695 aa18.94■□□□□ 0.62
CNOT9-208ENST00000542068 ANP32BQ92688 251 aaKnown RBP18.94■□□□□ 0.62
CNOT9-208ENST00000542068 IL13P35225 146 aa18.93■□□□□ 0.62
CNOT9-208ENST00000542068 PIK3C2BO00750 1634 aa18.93■□□□□ 0.62
CNOT9-208ENST00000542068 FOXO3O43524 673 aa18.93■□□□□ 0.62
CNOT9-208ENST00000542068 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
CNOT9-208ENST00000542068 PTPRMP28827 1452 aa18.92■□□□□ 0.62
CNOT9-208ENST00000542068 BAG4O95429 457 aaKnown RBP18.92■□□□□ 0.62
CNOT9-208ENST00000542068 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
CNOT9-208ENST00000542068 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
CNOT9-208ENST00000542068 IFT172Q9UG01 1749 aa18.91■□□□□ 0.62
CNOT9-208ENST00000542068 ARID3AQ99856 593 aa18.91■□□□□ 0.62
CNOT9-208ENST00000542068 ACEP12821 1306 aa18.91■□□□□ 0.62
CNOT9-208ENST00000542068 CFAP74Q9C0B2 1584 aa18.91■□□□□ 0.62
CNOT9-208ENST00000542068 CIZ1Q9ULV3 898 aaPredicted RBP18.91■□□□□ 0.62
CNOT9-208ENST00000542068 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
CNOT9-208ENST00000542068 RBM27Q9P2N5 1060 aaKnown RBP18.91■□□□□ 0.62
CNOT9-208ENST00000542068 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
CNOT9-208ENST00000542068 ZGPATQ8N5A5 531 aaKnown RBP18.9■□□□□ 0.62
CNOT9-208ENST00000542068 EIF4A2Q14240 407 aaKnown RBP18.89■□□□□ 0.62
CNOT9-208ENST00000542068 PRPF40AO75400 957 aaKnown RBP18.89■□□□□ 0.61
CNOT9-208ENST00000542068 TSHZ3Q63HK5 1081 aa18.89■□□□□ 0.61
CNOT9-208ENST00000542068 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
CNOT9-208ENST00000542068 MYO5BQ9ULV0 1848 aa18.89■□□□□ 0.61
CNOT9-208ENST00000542068 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
CNOT9-208ENST00000542068 F6X3S4 739 aa18.89■□□□□ 0.61
CNOT9-208ENST00000542068 AK9Q5TCS8 1911 aa18.89■□□□□ 0.61
CNOT9-208ENST00000542068 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
CNOT9-208ENST00000542068 ZNF428Q96B54 188 aa18.88■□□□□ 0.61
CNOT9-208ENST00000542068 EID1Q9Y6B2 187 aa18.88■□□□□ 0.61
CNOT9-208ENST00000542068 ARHGEF28Q8N1W1 1705 aaKnown RBP18.88■□□□□ 0.61
CNOT9-208ENST00000542068 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
CNOT9-208ENST00000542068 IFT57Q9NWB7 429 aa18.87■□□□□ 0.61
CNOT9-208ENST00000542068 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
CNOT9-208ENST00000542068 ZC3H13Q5T200 1668 aaKnown RBP18.87■□□□□ 0.61
CNOT9-208ENST00000542068 MYO3AQ8NEV4 1616 aa18.87■□□□□ 0.61
CNOT9-208ENST00000542068 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
CNOT9-208ENST00000542068 LTKP29376 864 aa18.87■□□□□ 0.61
CNOT9-208ENST00000542068 NLRP6P59044 892 aa18.87■□□□□ 0.61
CNOT9-208ENST00000542068 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms