RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 FOXO3O43524 673 aa9.95□□□□□ -0.82
NPIPB4-213ENST00000541329 TCP11L2Q8N4U5 519 aa9.95□□□□□ -0.82
NPIPB4-213ENST00000541329 USP31Q70CQ4 1352 aa9.95□□□□□ -0.82
NPIPB4-213ENST00000541329 MST1RQ04912 1400 aa9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 MSH6P52701 1360 aa9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 MAPK8IP3Q9UPT6 1336 aa9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 HMOX1P09601 288 aa9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 DEKP35659 375 aaKnown RBP9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 DLG5Q8TDM6 1919 aa9.94□□□□□ -0.82
NPIPB4-213ENST00000541329 ZBTB7CA1YPR0 619 aa9.93□□□□□ -0.82
NPIPB4-213ENST00000541329 IL13P35225 146 aa9.93□□□□□ -0.82
NPIPB4-213ENST00000541329 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
NPIPB4-213ENST00000541329 KRT28Q7Z3Y7 464 aa9.93□□□□□ -0.82
NPIPB4-213ENST00000541329 NOP58Q9Y2X3 529 aaKnown RBP9.93□□□□□ -0.82
NPIPB4-213ENST00000541329 DCCP43146 1447 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 NCOA3Q9Y6Q9 1424 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 MAP3K19Q56UN5 1328 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 AMPHP49418 695 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 DDX17Q92841 729 aaKnown RBP9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 PLEKHF1Q96S99 279 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 RGPD1P0DJD0 1748 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 ALS2Q96Q42 1657 aa9.92□□□□□ -0.82
NPIPB4-213ENST00000541329 PRKAR2BP31323 418 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 SLFN5Q08AF3 891 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 EIF4A2Q14240 407 aaKnown RBP9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 PNNQ9H307 717 aaKnown RBP9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 RGPD2P0DJD1 1756 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 RGPD5Q99666 1765 aa9.91□□□□□ -0.82
NPIPB4-213ENST00000541329 SBNO1A3KN83 1393 aa9.9□□□□□ -0.82
NPIPB4-213ENST00000541329 NEFMP07197 916 aa9.9□□□□□ -0.82
NPIPB4-213ENST00000541329 TMPOP42166 694 aaKnown RBP9.9□□□□□ -0.82
NPIPB4-213ENST00000541329 NGEFQ8N5V2 710 aa9.9□□□□□ -0.82
NPIPB4-213ENST00000541329 RCAN3Q9UKA8 241 aa9.9□□□□□ -0.82
NPIPB4-213ENST00000541329 NFAT5O94916 1531 aa9.9□□□□□ -0.82
NPIPB4-213ENST00000541329 FLT4P35916 1363 aa9.89□□□□□ -0.83
NPIPB4-213ENST00000541329 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
NPIPB4-213ENST00000541329 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
NPIPB4-213ENST00000541329 FCHSD2O94868 740 aa9.89□□□□□ -0.83
NPIPB4-213ENST00000541329 DUSP27Q5VZP5 1158 aa9.89□□□□□ -0.83
NPIPB4-213ENST00000541329 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
NPIPB4-213ENST00000541329 E9PSI1 815 aa9.88□□□□□ -0.83
NPIPB4-213ENST00000541329 RIPK4P57078 832 aa9.88□□□□□ -0.83
NPIPB4-213ENST00000541329 SULT6B1Q6IMI4 303 aa9.88□□□□□ -0.83
NPIPB4-213ENST00000541329 AEBP1Q8IUX7 1158 aa9.88□□□□□ -0.83
NPIPB4-213ENST00000541329 PHACTR3Q96KR7 559 aa9.88□□□□□ -0.83
NPIPB4-213ENST00000541329 SLIT3O75094 1523 aa9.87□□□□□ -0.83
NPIPB4-213ENST00000541329 HOXC9P31274 260 aa9.87□□□□□ -0.83
NPIPB4-213ENST00000541329 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
NPIPB4-213ENST00000541329 RRP1P56182 461 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 NFE2L2Q16236 605 aa9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 CCDC27Q2M243 656 aa9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 WDR63Q8IWG1 891 aa9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 TRMT2AQ8IZ69 625 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 KCNH5Q8NCM2 988 aa9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 CRYBG1Q9Y4K1 1723 aa9.86□□□□□ -0.83
NPIPB4-213ENST00000541329 PXDNQ92626 1479 aa9.85□□□□□ -0.83
NPIPB4-213ENST00000541329 NPHP3Q7Z494 1330 aa9.85□□□□□ -0.83
NPIPB4-213ENST00000541329 BRINP3Q76B58 766 aa9.85□□□□□ -0.83
NPIPB4-213ENST00000541329 SLAIN2Q9P270 581 aa9.85□□□□□ -0.83
NPIPB4-213ENST00000541329 ARHGEF10O15013 1369 aa9.85□□□□□ -0.83
NPIPB4-213ENST00000541329 TNS3Q68CZ2 1445 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 PLIN1O60240 522 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 GCP02774 474 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 ANP32AP39687 249 aaKnown RBP9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 B4GALNT3Q6L9W6 998 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 IPO9Q96P70 1041 aaKnown RBP9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 EYA1Q99502 592 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 NHSL1Q5SYE7 1610 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 RTL1A6NKG5 1358 aa9.84□□□□□ -0.83
NPIPB4-213ENST00000541329 USP19O94966 1318 aa9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 ZC3H6P61129 1189 aaKnown RBP9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 NCBP3Q53F19 620 aaKnown RBP9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 IP6K1Q92551 441 aa9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 TSR2Q969E8 191 aaKnown RBP9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 MYH16Q9H6N6 1097 aa9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 KIF24Q5T7B8 1368 aa9.83□□□□□ -0.84
NPIPB4-213ENST00000541329 ABCA3Q99758 1704 aa9.82□□□□□ -0.84
NPIPB4-213ENST00000541329 SPATA31A3Q5VYP0 1347 aa9.82□□□□□ -0.84
NPIPB4-213ENST00000541329 IGSF1Q8N6C5 1336 aa9.82□□□□□ -0.84
NPIPB4-213ENST00000541329 ROBO1Q9Y6N7 1651 aa9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 RXRBP28702 533 aa9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 DCTN1Q14203 1278 aa9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 VIRMAQ69YN4 1812 aaKnown RBP9.81□□□□□ -0.84
NPIPB4-213ENST00000541329 COL18A1P39060 1754 aa9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 BCAR3O75815 825 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms