RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 PLXNC1O60486 1568 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 MCM4P33991 863 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
PHC1-208ENST00000540574 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
PHC1-208ENST00000540574 INSRP06213 1382 aa12.18□□□□□ -0.46
PHC1-208ENST00000540574 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
PHC1-208ENST00000540574 CHMP3Q9Y3E7 222 aa12.18□□□□□ -0.46
PHC1-208ENST00000540574 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
PHC1-208ENST00000540574 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
PHC1-208ENST00000540574 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
PHC1-208ENST00000540574 PTMAP06454 111 aaKnown RBP12.17□□□□□ -0.46
PHC1-208ENST00000540574 ST18O60284 1047 aa12.17□□□□□ -0.46
PHC1-208ENST00000540574 SURF6O75683 361 aaKnown RBP12.17□□□□□ -0.46
PHC1-208ENST00000540574 MCCP23508 829 aa12.17□□□□□ -0.46
PHC1-208ENST00000540574 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
PHC1-208ENST00000540574 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
PHC1-208ENST00000540574 ARID3AQ99856 593 aa12.17□□□□□ -0.46
PHC1-208ENST00000540574 NSD2O96028 1365 aa12.17□□□□□ -0.46
PHC1-208ENST00000540574 SYNMO15061 1565 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 NEK4P51957 841 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 HDGFL1Q5TGJ6 251 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
PHC1-208ENST00000540574 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
PHC1-208ENST00000540574 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
PHC1-208ENST00000540574 C9orf78Q9NZ63 289 aaPredicted RBP12.15□□□□□ -0.46
PHC1-208ENST00000540574 DTNBO60941 627 aa12.15□□□□□ -0.46
PHC1-208ENST00000540574 NUCB1Q02818 461 aa12.15□□□□□ -0.46
PHC1-208ENST00000540574 KIF1BO60333 1816 aa12.15□□□□□ -0.46
PHC1-208ENST00000540574 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
PHC1-208ENST00000540574 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
PHC1-208ENST00000540574 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
PHC1-208ENST00000540574 ABCC11Q96J66 1382 aa12.15□□□□□ -0.47
PHC1-208ENST00000540574 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.47
PHC1-208ENST00000540574 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
PHC1-208ENST00000540574 HDAC1Q13547 482 aaPredicted RBP12.14□□□□□ -0.47
PHC1-208ENST00000540574 G2E3Q7L622 706 aa12.14□□□□□ -0.47
PHC1-208ENST00000540574 FGD1P98174 961 aa12.14□□□□□ -0.47
PHC1-208ENST00000540574 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
PHC1-208ENST00000540574 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
PHC1-208ENST00000540574 IL13P35225 146 aa12.14□□□□□ -0.47
PHC1-208ENST00000540574 MPNDQ8N594 471 aa12.14□□□□□ -0.47
PHC1-208ENST00000540574 UPF3BQ9BZI7 483 aaKnown RBP12.14□□□□□ -0.47
PHC1-208ENST00000540574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
PHC1-208ENST00000540574 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
PHC1-208ENST00000540574 SMC5Q8IY18 1101 aa12.13□□□□□ -0.47
PHC1-208ENST00000540574 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
PHC1-208ENST00000540574 SSFA2P28290 1259 aa12.13□□□□□ -0.47
PHC1-208ENST00000540574 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
PHC1-208ENST00000540574 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
PHC1-208ENST00000540574 MAP3K4Q9Y6R4 1608 aa12.13□□□□□ -0.47
PHC1-208ENST00000540574 REC8O95072 547 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 GNAI2P04899 355 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 TET3O43151 1660 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 SBNO2Q9Y2G9 1366 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
PHC1-208ENST00000540574 CAVIN1Q6NZI2 390 aaKnown RBP12.12□□□□□ -0.47
PHC1-208ENST00000540574 RNF214Q8ND24 703 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 ABCA6Q8N139 1617 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
PHC1-208ENST00000540574 METP08581 1390 aa12.11□□□□□ -0.47
PHC1-208ENST00000540574 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
PHC1-208ENST00000540574 TNPO1Q92973 898 aaKnown RBP12.11□□□□□ -0.47
PHC1-208ENST00000540574 SIL1Q9H173 461 aa12.11□□□□□ -0.47
PHC1-208ENST00000540574 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
PHC1-208ENST00000540574 CEP152O94986 1710 aa12.11□□□□□ -0.47
PHC1-208ENST00000540574 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
PHC1-208ENST00000540574 IL16Q14005 1332 aa12.11□□□□□ -0.47
PHC1-208ENST00000540574 RNF17Q9BXT8 1623 aaKnown RBP12.11□□□□□ -0.47
PHC1-208ENST00000540574 LTKP29376 864 aa12.11□□□□□ -0.47
PHC1-208ENST00000540574 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
PHC1-208ENST00000540574 ZMYM3Q14202 1370 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 MYOM2P54296 1465 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 ZNF530Q6P9A1 599 aaPredicted RBP12.1□□□□□ -0.47
PHC1-208ENST00000540574 USP19O94966 1318 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
PHC1-208ENST00000540574 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
PHC1-208ENST00000540574 MYL6BP14649 208 aa12.09□□□□□ -0.47
PHC1-208ENST00000540574 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
PHC1-208ENST00000540574 EYA1Q99502 592 aa12.09□□□□□ -0.47
PHC1-208ENST00000540574 SDSP20132 328 aa12.09□□□□□ -0.47
PHC1-208ENST00000540574 FLIIQ13045 1269 aa12.09□□□□□ -0.47
PHC1-208ENST00000540574 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
PHC1-208ENST00000540574 LRRCC1Q9C099 1032 aa12.09□□□□□ -0.47
PHC1-208ENST00000540574 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
PHC1-208ENST00000540574 RPAP2Q8IXW5 612 aaPredicted RBP12.08□□□□□ -0.48
PHC1-208ENST00000540574 MSNP26038 577 aaKnown RBP12.08□□□□□ -0.48
PHC1-208ENST00000540574 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
PHC1-208ENST00000540574 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms